Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01191 ATGGCTTGGAGGAGAGTGTTGAAGGCTGTACAGGCACTGGTTGCCCACAGTTCTCTGTTTTGTTTCACGCTTCTGCTCGTTTTCAAGCTCGATGACGTCGTGTTCTATAGTTGGTGGATAATATTTTTCCCTCTGTGGGCATTTCACGCAGTCGTCGCTCGGGGAAGATTCTCATTACCTGCTCCATCGGTTCCACATAATCGCAATTGGGCACCTTGCCATGCTGTTGTTGCCACCCCCTTGCTCATCGCATTTGAATTGCTTCTCTGTATATATCTTGAGAGCATTTATGTTCATGGTTTTCCGGCAGTTAGTTTGAAGATTGTTTTTCTTCCATTATTGGCATTTGAAATGACTATTCTGATTGATAATTTCAGAACGTGTAGGGCTCTTATGCCAGGAGATAATGAAGGCTTGAGTGATGAGGCTATGTGGGAAACTCTTACACACTTCTGGGTGGTGATTTCCATGGTCTTCTTCGTCGCTGGTACAATCTTCACCCTCCTGAAGCTCAGTGGTGACGTTGGCGCTCTCGGTTGGTGGGACTTATTTATAAATTTTGGTATTGCTGAGTGCTTTGCCTTTCTTGTCTGTACAAAGTGGTCTAATCCTATTATTCACAGAAACTCTACCAGTAGAGAAGCCACTTCTTCTTCTTCTTTGATTATTAGATATCTAGATTGGGGTGGCGGATTAATACTCTCCCCCCAACAAGACGAGCAGCAAGATAGAATATGTGGCCTTCAAGACATTGGAGGGCATATAATGAAACTTCCGATTATCGGCTTTCAAATCCTTCTTTGCATGCGCCTTGAGGGAACACCTGCTAATGCTAAATATATGCCAATCCCGGCTCTTTTTTCGCCTCTTTTCCTGCTGCAAGGTGCTGGTGTATTATTTTCGGCATCTATGTTGGTGGAGAGCATTGTTCTTCTTCGACGAAGCGGATTTGGCAATGGGTTGTATTTCAGATTTTCTTCAAAAGCTAACGAATGTTTCGAGTTCTTTCACCGTGGATCAAGGCTTTTGGGTTGGTGGTCAATTGACGAAGGAAGTCGTGAGGAACTGGCCCGAATATTTCACGAGAGAGCTTCCGGATATAATACTTTCTCTGGTTATCCTCCTGAGATTGTGAAAAAAATGCCCAAGAAAGATCTTGCTGAGGAGGTCTGGAGACTTCAAGCTGCTCTTGGCGAGCAGACGGAAATTACGAAATGTAGTCAGCTCGAGTACGAAAGACTCCAGAATGTAAGGACTCAGCTTCTGAGAAGGTGTTATGTAGAGTTTGCTTTGAGGGAGAGATTAGCATCGTCCTCCTTCCATGCAGGCATCGAATACTTTGCAGTGTGTGCTCGGAGAAGTGCAAGAAATGCCCGATTTGTCGCGTCTCTATCGAGGAGCTTTTACCGACCTTTGCTTCCGATCAGAAATGGAGTGCTTAAGGTGAACTTGCCACCAGCTTCGAGTTTACCCGTGGAAAGTAAAACTTTGCTTGAAGAGTCTAGTCCATCTGTTCTTCAGGGTCTTTTCGGTACGTTTCGAGGCCTTATATTGCAGCTTTGGATGTTGTGGGAGTTGCTACTGATTTGGGGAGCCGATGCTCGTTATTGCTCCGACGCCTCCCCAGTTGTAAAAACAGAGGAGAGACAGTCCCCCTATGACCCTTAA 1668 45.26 MAWRRVLKAVQALVAHSSLFCFTLLLVFKLDDVVFYSWWIIFFPLWAFHAVVARGRFSLPAPSVPHNRNWAPCHAVVATPLLIAFELLLCIYLESIYVHGFPAVSLKIVFLPLLAFEMTILIDNFRTCRALMPGDNEGLSDEAMWETLTHFWVVISMVFFVAGTIFTLLKLSGDVGALGWWDLFINFGIAECFAFLVCTKWSNPIIHRNSTSREATSSSSLIIRYLDWGGGLILSPQQDEQQDRICGLQDIGGHIMKLPIIGFQILLCMRLEGTPANAKYMPIPALFSPLFLLQGAGVLFSASMLVESIVLLRRSGFGNGLYFRFSSKANECFEFFHRGSRLLGWWSIDEGSREELARIFHERASGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKCSQLEYERLQNVRTQLLRRCYVEFALRERLASSSFHAGIEYFAVCARRSARNARFVASLSRSFYRPLLPIRNGVLKVNLPPASSLPVESKTLLEESSPSVLQGLFGTFRGLILQLWMLWELLLIWGADARYCSDASPVVKTEERQSPYDP 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35375507 35384016 - BLOR17774 Blo06g01191 62484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01191 555 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 425 - -
Blo06g01191 555 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 425 - -
Blo06g01191 555 Pfam Transmembrane Fragile-X-F protein 29 293 IPR019396 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00367 Blo-Chr15:4897246 Blo06g01191 Blo-Chr6:35375507 1.70E-13 transposed
Blo01g00483 Blo-Chr1:5289001 Blo06g01191 Blo-Chr6:35375507 1.39E-28 wgd
Blo15g00366 Blo-Chr15:4879591 Blo06g01191 Blo-Chr6:35375507 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01191 - - tcc:18604055 711.064