Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01194 ATGCCCTTCTACCTCCTCCTTCCTCAATTGCCTCCACTCCATTCTTCAATCGGTCCAAATATTCGTCTCCTCTTTCTGATTCAGGATCCTCCTCTCTCTGCCGTCTTAATTCGGATGGAGCCGATGGATATAGTGGGAAAGTCAAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACGAAAATCATCAAGGAGATGTTGCCGCCAGATGTACGAGTCGCAAGAGATGCTCAAGATCTTTTAATCGAGTGTTGTGTAGAGTTTATAAATCTAGTATCATCGGAGTCTAATGAAGTATGTAACAGGGAAGATAAAAGAACGATTGCGCCTGAACATGTACTCAAGGCATTACAGGAAAATAGTGATGGTATGGAGAATAGAGAGAGAGAGAGAGAGAGAACTAGAGGAATTTTGGAGAATGATGAAATACAGGGAATTCTTGGTTTTAGCGAGTACATCGAAGAAGTCTATTCTGCATATGAACAGCACAAGATTGAGACCATGCAAGACTCCTTGAAGGGTGGAAAGTGGAGCAATGGAGCTGAGATGACAGAGGAGGAGGCCCTGCTGGAGCAGCAGAGAATGTTTGCTGAGGCTCGAGCAAGAATGAACGGCGTGGCCGAAGCTCCAAAGCAACCAGAGGCTGATCAAAGTTTAGAGAGCTAA 666 45.05 MPFYLLLPQLPPLHSSIGPNIRLLFLIQDPPLSAVLIRMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALQENSDGMENRERERERTRGILENDEIQGILGFSEYIEEVYSAYEQHKIETMQDSLKGGKWSNGAEMTEEEALLEQQRMFAEARARMNGVAEAPKQPEADQSLES 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35462669 35465323 - BLOR17777 Blo06g01194 62487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01194 221 SUPERFAMILY Histone-fold 50 120 IPR009072 GO:0046982
Blo06g01194 221 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 52 117 IPR003958 -
Blo06g01194 221 Coils Coil 114 134 - -
Blo06g01194 221 PANTHER PROTEIN DR1 HOMOLOG 144 220 - -
Blo06g01194 221 PANTHER PROTEIN DR1 HOMOLOG 39 119 - -
Blo06g01194 221 Gene3D Histone, subunit A 42 210 IPR009072 GO:0046982
Blo06g01194 221 PANTHER PROTEIN DR1 HOMOLOG 144 220 IPR044255 -
Blo06g01194 221 PANTHER PROTEIN DR1 HOMOLOG 39 119 IPR044255 -
Blo06g01194 221 MobiDBLite consensus disorder prediction 201 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01194 Blo-Chr6:35462669 Blo11g00227 Blo-Chr11:1847022 7.89E-13 dispersed
Blo16g00147 Blo-Chr16:3246930 Blo06g01194 Blo-Chr6:35462669 4.41E-80 wgd
Blo04g00812 Blo-Chr4:8423345 Blo06g01194 Blo-Chr6:35462669 5.62E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12547 PF00808 CBFD_NFYB_HMF 8.10E-22 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01194 K21751 - tcc:18604965 273.092