Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01207 ATGCCGTCTTCCTCGAGATTCTTCATTCGTCTCGTTCTTCTGCTTCTCTTGAATCAATGGGTAAGGAATTTTTCTCACTTTTGGATTCTTATTTTCTCTGATAACCATTTCTGGGCACCTCCCCAAAGTAGATCTTGTCGACCAAACTACAATCCTGAGGAATTTCAGGCCATGGAATTCAATGATAACCATGGCTATCAAGTTCACAAAATTCTCTTTGGGAGGAATAATAATGGCTGCCAGATGCAGAAATTGTTAGAGCTGAAAATCGTAGTCTTAGCAGCTCTGATCTTCGTGCAGTTTCCATCAACTGAGGCTTATGATCCGTTGGATCCGAATGGAAACATAACGATCAAATGGGACATTATTTCTTGGACCCCCGATGGTTATGTAGCTACTGTTACGATGAACAACTTTCAGATGTATCGACACATAATGACTCCCGGATGGACTCTATCCTGGTCGTGGGCGAAAAAAGAAGTGATATGGTCAATGGTGGGAGCTCAAACCACAGAGCAAGGAGATTGTTCAAAGTTCAAAGGAAATGTACCCCATTGCTGTAAGAAAACTCCAACTGTAGTTGATTTGCTTCCTGGCGTTCCATACAACCAACAATTCTCCAATTGCTGTAAGGGTGGCGTTTTGTCGTCTTGGGGTCAGGATCCGACCGCCTCAGTCTCAGCCTTTCAGGTGAGTGTTGGACTGGCCGGGACTTCGAATAAAACAGTGAAATTGCCAAAAAATTTCACTTTGTTCGGTCCAGGACCTGGATATACTTGCGGGCCTGCAAAGGTTGTTCCGTCTACGGTCTTCCTCACATCTGATCGGAGGCGAAAAACTCAAGCGTTAATGACATGGAATGTGACCTGCACTTATTCGCAGTTTTTGTCCTCGAAGAACCCAAGCTGCTGCGTCTCGTTTTCGTCCTTTTACAACGATACCATCACTCCTTGCCCGTCTTGTGCATGTGGTTGCCAAAACCAAAAAAACTGTGTCCCGAGCTCGAAGCTTGTGCACAAGGCAGGGATGAACACTCCGAAAAAGGATAATTCGCCTTTACTACAATGCACGCACCACATGTGTCCGATACGTGTTCATTGGCACGTAAAGCTCAACTACAAAGATTATTGGAGGGTGAAAATCGCTATCACGAACTTCAACTATCGCTTGAACTACACTCAATGGACACTCGCAGTGCAGCACCCGAATCTCAACAACGTAACCCAAGTATTTAGCTTCGATTACAAGCCACTTGTTCCCTACGAAGCCATTAACGATACTGGCATGTTTTATGGCATGAAATTCTACAACGACTTGTTAATGGAAGCCGGGCCGTCAGGAAATGTGCAGTCGGAGATACTTATGAAGAAGGATGAGGAAACATTTACATTTAAGCAAGGATGGGCATTTCCTCGGAAAATTTACTTCAACGGAGACGAATGTAAGCTGCCTTCGCCTGACGCCTATCCGTTTCTCCCAAACTCAGCTCCTGCAGGATCTATTGCTGTCACAAAAATGGTGATCTACTTGTTTCCGATGTTGCTGCTCTTATGGTGA 1557 44.77 MPSSSRFFIRLVLLLLLNQWVRNFSHFWILIFSDNHFWAPPQSRSCRPNYNPEEFQAMEFNDNHGYQVHKILFGRNNNGCQMQKLLELKIVVLAALIFVQFPSTEAYDPLDPNGNITIKWDIISWTPDGYVATVTMNNFQMYRHIMTPGWTLSWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVLSSWGQDPTASVSAFQVSVGLAGTSNKTVKLPKNFTLFGPGPGYTCGPAKVVPSTVFLTSDRRRKTQALMTWNVTCTYSQFLSSKNPSCCVSFSSFYNDTITPCPSCACGCQNQKNCVPSSKLVHKAGMNTPKKDNSPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRLNYTQWTLAVQHPNLNNVTQVFSFDYKPLVPYEAINDTGMFYGMKFYNDLLMEAGPSGNVQSEILMKKDEETFTFKQGWAFPRKIYFNGDECKLPSPDAYPFLPNSAPAGSIAVTKMVIYLFPMLLLLW 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35642734 35645990 + BLOR17790 Blo06g01207 62500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01207 518 Pfam COBRA-like protein 130 293 IPR006918 GO:0010215|GO:0031225
Blo06g01207 518 PANTHER PROTEIN COBRA 92 514 IPR006918 GO:0010215|GO:0031225
Blo06g01207 518 PIRSF COBRA 80 518 IPR006918 GO:0010215|GO:0031225
Blo06g01207 518 PANTHER COBRA-LIKE PROTEIN 4 92 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01207 Blo-Chr6:35642734 Blo10g00166 Blo-Chr10:1974172 0 dispersed
Blo15g00345 Blo-Chr15:4346480 Blo06g01207 Blo-Chr6:35642734 4.20E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01207 - - cmo:103494059 820.076