Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g01211 ATGAATTCAAAGGAAAAAAGCTTAAAAGCAAAGGCAGAGGGAGAGACCACCGCAAACGAGTGGAAATTACCCAAGTCGTTGGCATCGAGTTCAAGATCATGGTCGGGATCGAGAAATCCGAGGATCGTGCGTGTTTCTCGAATGTTTGGAGGGAAAGACAGACATAGTAAAGTTTGTACAATCCGAGGATTGAGAGATAGGAGGATTAGGCTTTCAGTCCCAACTGCAATTCAACTATATGATCTTCAAGATAGACTTGGAGTAAATCAACCAAGCAAGGTAATCGATTGGTTGCTTGCCGTCACGAAGCTCGATATCGATAAGCTCCCTCCGCTCCAACTACCTCCTGGATTCGGTCAATTAGGTCGAGAAATCTTGACTTCTCAAGATCATTCAGAAATTATGTCGAAAAGTAAGCAAATCCAAAAAGGAGAGAATTTGGTGAAAGAAAAGTCGATTAAAACACACGAAGACGAAGAAGAACAAGTTCATCAAGCCATTTGGGATTATAACAACCAAATTTCCGGGCAAAAGCTATTCCAATCGGCAAATGTTTCGTCTTTGCCGAGTCTCGCTTACGATAACCGTTACTATTCGGATCAACCCTCTTGTTTATCTCTATCTCAGTTTGGAAATCATGGAGTTTTTCAACCCCAATCGGAGATTACCCAAACAGCCCATAATTCTCTACAAATTCCTCCATTATTATCAGCATCGTCTTCTCAAATTTTCTTCTGCCAACCTTCTGTAACACCAGCTGCTTTGTTTACCCCTTTTCCTTCTCATATCTCCACTCCATTGGAGAGTAGTGACACTACCAGGCTTTACAGCAATATCCAAATGTTAAATTCTACTCATCTTTTCAGCTCACCTGGCAAGTTTTTTCCTCCAAATCTTAGTCCAAAGCCTGAAAATTCAGAAAACAGGAACAGCCCAGAAAAGAATGATCCTAAGTAA 957 41.17 MNSKEKSLKAKAEGETTANEWKLPKSLASSSRSWSGSRNPRIVRVSRMFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGVNQPSKVIDWLLAVTKLDIDKLPPLQLPPGFGQLGREILTSQDHSEIMSKSKQIQKGENLVKEKSIKTHEDEEEQVHQAIWDYNNQISGQKLFQSANVSSLPSLAYDNRYYSDQPSCLSLSQFGNHGVFQPQSEITQTAHNSLQIPPLLSASSSQIFFCQPSVTPAALFTPFPSHISTPLESSDTTRLYSNIQMLNSTHLFSSPGKFFPPNLSPKPENSENRNSPEKNDPK 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35675705 35676746 - BLOR17794 Blo06g01211 62504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g01211 318 MobiDBLite consensus disorder prediction 22 37 - -
Blo06g01211 318 Pfam TCP family transcription factor 51 161 IPR017887 -
Blo06g01211 318 PANTHER TRANSCRIPTION FACTOR TCP17 2 301 - -
Blo06g01211 318 MobiDBLite consensus disorder prediction 1 37 - -
Blo06g01211 318 MobiDBLite consensus disorder prediction 293 318 - -
Blo06g01211 318 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 301 IPR005333 GO:0003700
Blo06g01211 318 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Blo06g01211 318 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01211 Blo-Chr6:35675705 Blo18g00411 Blo-Chr18:4427035 4.51E-46 dispersed
Blo16g00158 Blo-Chr16:3590696 Blo06g01211 Blo-Chr6:35675705 3.93E-64 wgd
Blo04g00796 Blo-Chr4:7977247 Blo06g01211 Blo-Chr6:35675705 4.75E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12550 PF03634 TCP 2.90E-26 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g01211 - - qsu:112017684 257.684