Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00030 ATGACCCATCATCAGAGGGTTGGACTTTCCATTGCCTTTCTCGCTTTCGCTGCTGTACAGTTCATAGAGCCTGTTGTTTACCTTAAAATGCTAGTTCTTAGCTATTCCGATTCGCCATTTCAAATTTCCATTCTCATTCTCTTCTCTTTCTCTCTCTACTTTCTGATTTTTCTGTCATTGGTTTTCTCCTTACAGCTCTATGGCGAAAACTGGGAAATGGGTTTTTCAGAGCAGGGATTATTAGCCAACACTGAGCAAGACGAAGATATATTTTCATCTGTGTTGGAAAATAGAATGCCGTTTTTACAGATGTTACAGGAAGCTCCGCCATTGTTACCCTTTAAAGAGCTCGGATTTCAAACTTTGCTGAAATTGCAGCATTTCAGGGATCCATGGCAGGTCGACGAGCTGAAAATAGGAGAAAAAATTCAAACTTTCGAACTAGAAAGCTGTGTAACCCACGACTTGATGGAGTTGCATTCCCCCAATAAATCAGAAAGCAATCAAATCGGATCGAACGAAGAAAAAATTTGTTTGAGAGAAGGAAGGAACACTTCGAAGCAGACCCAGCTGGGGAAATCTGCAGCTCTAGTGAGAGAAAGAAGAAAGAGAAAGAGAGCGAAGCCATTGAAGAACAAGGAAGAAGTAGAGAGCCAAAGAATGACCCACATTGCAGTTGAGAGAAACCGGAGACGACAAATGAACGATCACCTCAACGTTCTTCGCTCTCTAATGCCGTCTTCTTACATTCAAAGAGGTGATCAAGCGTCAATCATCGGAGGAGCGATAAACTTCGTGAAAGAACTCGAACAACTCCTCCATTCTCTCGAGTCGCATCGAAGAACAAGAAACCCAGAAGGAAGCAGCTCTGCAAAAAACCAGTCTTCAGTTTCGTCCTCTTCCTCCGGCATAGCAATGGCTTCCAACGGCTTCTTCATGTCTCTCTCTCAACACAGAATACCTTCAGACGACCAAGACAAGGAAAGCAGCTTGAAAGAACGAAGAATCGGAGACGGAGTAACTGCAGAGAACAAATCGGAAACGGCAGATATTGAAGTGACAGTGATTCAAACCCATGTAAACTTGAAAATTCAGTGCGAGAGAAGGCCGAGACAGTTGGTGAAAGCCATTGTAGCACTCGAAGATCTTAAGCTCACTGTTCTTCATCTCAACGTCACCACCTCACAATCTACAGTTCTTTATTCTTTCAATCTCAAGATAGAAGATGACTGTACACTAAGGTCAGCGGACGAGATAGCAGGATCAGTGCATCAAATTTTCAGCTACATCAACGGTAGATAA 1302 43.01 MTHHQRVGLSIAFLAFAAVQFIEPVVYLKMLVLSYSDSPFQISILILFSFSLYFLIFLSLVFSLQLYGENWEMGFSEQGLLANTEQDEDIFSSVLENRMPFLQMLQEAPPLLPFKELGFQTLLKLQHFRDPWQVDELKIGEKIQTFELESCVTHDLMELHSPNKSESNQIGSNEEKICLREGRNTSKQTQLGKSAALVRERRKRKRAKPLKNKEEVESQRMTHIAVERNRRRQMNDHLNVLRSLMPSSYIQRGDQASIIGGAINFVKELEQLLHSLESHRRTRNPEGSSSAKNQSSVSSSSSGIAMASNGFFMSLSQHRIPSDDQDKESSLKERRIGDGVTAENKSETADIEVTVIQTHVNLKIQCERRPRQLVKAIVALEDLKLTVLHLNVTTSQSTVLYSFNLKIEDDCTLRSADEIAGSVHQIFSYINGR 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 515651 517812 + BLOR17962 Blo07g00030 62554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00030 433 MobiDBLite consensus disorder prediction 287 302 - -
Blo07g00030 433 Gene3D - 210 284 IPR036638 GO:0046983
Blo07g00030 433 CDD bHLH_AtFAMA_like 221 293 - -
Blo07g00030 433 PANTHER TRANSCRIPTION FACTOR BHLH70 74 432 - -
Blo07g00030 433 MobiDBLite consensus disorder prediction 319 343 - -
Blo07g00030 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 285 IPR036638 GO:0046983
Blo07g00030 433 Pfam Helix-loop-helix DNA-binding domain 219 270 IPR011598 GO:0046983
Blo07g00030 433 SMART finulus 224 275 IPR011598 GO:0046983
Blo07g00030 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 269 IPR011598 GO:0046983
Blo07g00030 433 MobiDBLite consensus disorder prediction 279 302 - -
Blo07g00030 433 MobiDBLite consensus disorder prediction 320 341 - -
Blo07g00030 433 MobiDBLite consensus disorder prediction 201 220 - -
Blo07g00030 433 PANTHER MAX DIMERIZATION, MAD 74 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00988 Blo-Chr2:38229496 Blo07g00030 Blo-Chr7:515651 1.42E-20 dispersed
Blo03g00120 Blo-Chr3:3557025 Blo07g00030 Blo-Chr7:515651 1.48E-42 dispersed
Blo07g00030 Blo-Chr7:515651 Blo09g00040 Blo-Chr9:563293 4.25E-35 dispersed
Blo02g00230 Blo-Chr2:2182195 Blo07g00030 Blo-Chr7:515651 2.48E-64 transposed
Blo02g00182 Blo-Chr2:1636906 Blo07g00030 Blo-Chr7:515651 3.26E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12558 PF00010 HLH 5.70E-10 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00030 - - zju:107423782 374.785