Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00066 ATGCAGCCAAGAAACGCGATCTTGAAGGAAACGCAGTCGCCTGAGCTGTCTTCTTCGCCGATTTCTGGTCTGTTCCCCAAATCAAAACCTACTCGGAAGCAGAGATCTTCTAAGGAGAATGCGCCGCCGTCGGATTTGAACTCAATGGCAGCGGATTCGAAACCCTCGCCTGCAACAGCAGCTAAGTTGAAGAGCCCGTTGCCTCCGAGGCCACCGTCTTCAAATCCCCTTAAGCGCAAGCTAATCATTGAGTCCGTGCCTGAGAATTCGAATTCTGGGCTTTCAGATTCTGGAGTGAAGGTTGTAGTGCGAATGAGGCCACCCTGCAAAGACAGGGATGAAGGCGAGGTTATAGTAGAAAAACTTTCTGATGATTCTTTGTCAATTAATGGGCAAACCTTTAATTTTGATGCTCTTGATATTTTTGAGCTTGTAGGAGCACCTCTTGTTGAAAACTGTATGTCAGGTTTCAACAGTTCTGTTTTTGCTTATGGGCAGACTGGAAGTGGAAAGACATACACGATGTGGGGTCCTGCTAATGCTTTATCAGATGAAAATTCACTTTGCCATCAACAAGGCTTAACTCCCCGTGTGTTTGAACGTCTATTTGCTCGCATAAGTGAAGAGCAAATAAAGCACGCTGACAAACAACTAAAGTATCAATGTCATTGCTCTTTTCTTGAGATTTACAACGAACAAATCACTGATTTATTGGATCCAAACAGAAAAAACCTTCAGATTAGAGAAGATGTTAAATCTGGTGTATATGTTGAAAATTTATCAGAAGAGTGTGTGTGTACTATGGCGGATGTTACTCAATTGCTAATAAAGGGCTTATCAAACAGAAGAACTGGCGCGACTAGTATAAATTCAGAAAGTTCGCGCTCACATACAGTTTTTACTTGTGTTGTTGAATCTCGATGCAAGATCATGGCAGATGGTTTAAGCAGCTTTAAAACAAGCAGAATTAATCTTGTTGATCTAGCTGGATCAGAAAGACAAAAGCTAACTGGTGCAGCAGGAGAGCGTCTGAAGGAGGCAGGAAATATCAACCGCTCTCTTTCACAACTTGGAAATTTGATCAACATCCTTGCTGAGATCTCCCATACTGGGAAGCAAAGGCATATCCCTTATAGAGACTCCAGGTTGACTTTTTTATTACAAGAATCTCTTGGGGGAAATGCAAAATTAGCTATGATCTGTTCCATTTCTCCTGCTCAAAGCTGTAAGAGTGAAACATTTAGTACTCTTAGATTTGCCCAACGTGCCAAGTCTATAAAAAACAAGGCGGTTATTAATGAAGTAATGCAAGACGATGTAAAACACTTGCGTGAAGTAATACGGCAGCTAAAGGATGAACTGCATCGGATAAAAGAAAATGGATACAACCCAAATGATACAAATGGAGGTCACTCTACAGCATGGCTTCGTAGAAGTTTAAGTCTACTAAAGTCCGGTCTGCATCATCCTGTTACATTACCCCATTTAGATGATGACAGTGATGAGGAGATGGAAATTGATGAGGAAGCAGTAGAGAAACTTTGTGTTGAATTGGGTAACAAATCAGCTGGCTGTGAGACTGGTAATTTGAGAAATAGTGATACTTCTGATTTAAAGTCAGCTACAGCATCAGAAATTTTGTGCTTTAGTGAGTCAGTGCCCTCCATATCATGCCGTGAATGTGCTGTGGAAGATTGTTGTGATGTGGATGTAAAAATGGAGGTTGAAACATCTACGAAAGATGAGGTTATAACTGACAGTCTTACAGTAATAGACCAAAAAACTCCTGAATTTTCCAAAGCTAGTTTGTCAAATAGTGAGAACCTTAAGCAAAACAATCCAAATTCAATTGATTTGTTATGCACAAGGGATATCAAGGAGGTATCTATTATAAGCTCTTCCTTAGACAAAATTATGAATGAAGAATCACCATGCAAGACAGTATCTAACTCACACAGCAACCTTTTTGATGGTTTTCCCGAAAGCATGTCATTTGCAGATGCACAGAACAGTAATCTTACCCCTTCAACTCTCAGCATGGTAAAAAGTAATGTATCCCCAGTTCTAAAGTCTCCAACACCAAGTATTTCTCCTAGAATCAGCAGTAGCAGGAAAAGTTTGAGGACTTCATCAATGCTGACTGCTTCACAGAACCTTCATGATGACAATGAATTTGTTCCCGAGGATGTACATAATTCTTTTTCTAAATCTATTAAAAGTGGCTCTTCTAACAGATTGTCAACACAAAAATGTAGTAGTGTTGCACCAACTGAAAAGTTGGCAGAAAGTATCCGTCATGGGCTTGAAGTTATTGACGGTTACCGCCAGAGTTTAGCAGTGAGACGCTCTTCATTCAGGTTCTCTTTCAAACCAGCGGAATTGAAGTTAAATGTACAGGTTGACAAAGTTGATGTTGGGGTGCAAACTTTGTCTCATGATGAGGCAGCAGAAGAAAACTTGGTATCATTTGTGTGCAATAGTTGCAAGAGTAAGATGATGCAGCTTGAGGTTTGCGAGGCGGATGACAGCCCAAATTTGCAGTTGGTACCCGTAAATGGCTCAGATTCTGCTGAAAAATCCAGGATGCAACTCCCAAAAGTGGTTGAAAAAGTTCTGGCAGGAGCCATTAGAAGAGAAATGGCACTAGAAGAGTTTTGTTCCAGGCAAGCTTCTGAGATTGTCCAACTCAACCGTTTGGTGCAACAGTACAAGCATGAGAGAGAATGTAACTCTGTATTAGGACAAACAAGGGAGGATAAAATTCTTCGTCTTGAGAGCCTGATGGATGGTGTTTTACCAAATGAAGACTTTCTAGAGGAAGAATTAGCATCTCTGACTCATGAGCATAAGGTTTTGAAAGAAAAATATGAGAATCATCCAGAAGTCTTAAGGACACAAATAGAATTAAAACGAACTCAAGATGAGTTGGAAAATTACCGAAATTTCTATGACTTGGGTGAGAAAGAAGTGTTATTAGAAGAGATTCAAGATTTAAGAAGCCAGCTGCAGTATTATGTTGACTCATCCTGCTCAATATCTCGAAAACATAATGCTGTTTTGCTATTGAACTATTCCGAGCAAAATTTGGCTCCTCCTCGAAACTCAATCCCAGATCTGACAGATGAGAGCCCCGAGGAGAAGCTAAAACAGGAAAGAATACGTTGGACAGAGACAGAGAGCAAGTGGATTTCTCTATCAGAAGAACTTAGAAGTGAACTTGAAGCTTGTAGGTCACTTGTTGAAAAGAAAAATTGTGAGCTTGAAATTGAAAAAAAATGTGGCGAAGAACTGAAGGAAGCAATGCAAATGGCTATGAAAGGTCATGCGCGCTTGTTAGAACAGTATGCAGACCTTGAAGAGAAACACATGCAGCTGCTTGCAAGGCATAGGAAGATTCAAGAAGGAATAGTGGATGTCAAAAAAGCAGCCTCTAAAGCAGGAGTTAAGGGCGCTGAGTCAAAGTTTATTAATGCTCTTGCTTCTGAAATTTCAGCCCTGAAAGTGGAAAGAGAAAAAGAGAGGCGGTATTTTAGAGATGAGAATAAAGGACTCCAAGCTCAACTGAGAGATACGGTTGAAGCTGTGCAGGCTGCAGGAGAGCTACTTGTACGCCTCAGGGAAGCTGAAGATGCTGTTGTAGCTTCCCAGAAACGAGCTATAGAAGCAGAACAAGAAACTGAGAAGGCTTACAAACATATTGAGAAATTGAAGAAAAGACATGAAAAAGAGAGTAGAACTCTTCCTTTGCTCAATGGAGAGTCACGTTTTCCAACTGAAGTAATGTCTTATGATGATACTGATGTGGCCAAATATGATAAAGTAGAGCCTCATGCTGCAGATGATCAACAATGGAGAAAGGAATTCGAACCCTTTTATGATTACGCAGATGTGTGTAGAGTAGTGGTGAAAGGTGATGGGTATGGTTCTTTGAGTGATGGGTATGGTTCTTGA 3951 40.65 MQPRNAILKETQSPELSSSPISGLFPKSKPTRKQRSSKENAPPSDLNSMAADSKPSPATAAKLKSPLPPRPPSSNPLKRKLIIESVPENSNSGLSDSGVKVVVRMRPPCKDRDEGEVIVEKLSDDSLSINGQTFNFDALDIFELVGAPLVENCMSGFNSSVFAYGQTGSGKTYTMWGPANALSDENSLCHQQGLTPRVFERLFARISEEQIKHADKQLKYQCHCSFLEIYNEQITDLLDPNRKNLQIREDVKSGVYVENLSEECVCTMADVTQLLIKGLSNRRTGATSINSESSRSHTVFTCVVESRCKIMADGLSSFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEISHTGKQRHIPYRDSRLTFLLQESLGGNAKLAMICSISPAQSCKSETFSTLRFAQRAKSIKNKAVINEVMQDDVKHLREVIRQLKDELHRIKENGYNPNDTNGGHSTAWLRRSLSLLKSGLHHPVTLPHLDDDSDEEMEIDEEAVEKLCVELGNKSAGCETGNLRNSDTSDLKSATASEILCFSESVPSISCRECAVEDCCDVDVKMEVETSTKDEVITDSLTVIDQKTPEFSKASLSNSENLKQNNPNSIDLLCTRDIKEVSIISSSLDKIMNEESPCKTVSNSHSNLFDGFPESMSFADAQNSNLTPSTLSMVKSNVSPVLKSPTPSISPRISSSRKSLRTSSMLTASQNLHDDNEFVPEDVHNSFSKSIKSGSSNRLSTQKCSSVAPTEKLAESIRHGLEVIDGYRQSLAVRRSSFRFSFKPAELKLNVQVDKVDVGVQTLSHDEAAEENLVSFVCNSCKSKMMQLEVCEADDSPNLQLVPVNGSDSAEKSRMQLPKVVEKVLAGAIRREMALEEFCSRQASEIVQLNRLVQQYKHERECNSVLGQTREDKILRLESLMDGVLPNEDFLEEELASLTHEHKVLKEKYENHPEVLRTQIELKRTQDELENYRNFYDLGEKEVLLEEIQDLRSQLQYYVDSSCSISRKHNAVLLLNYSEQNLAPPRNSIPDLTDESPEEKLKQERIRWTETESKWISLSEELRSELEACRSLVEKKNCELEIEKKCGEELKEAMQMAMKGHARLLEQYADLEEKHMQLLARHRKIQEGIVDVKKAASKAGVKGAESKFINALASEISALKVEREKERRYFRDENKGLQAQLRDTVEAVQAAGELLVRLREAEDAVVASQKRAIEAEQETEKAYKHIEKLKKRHEKESRTLPLLNGESRFPTEVMSYDDTDVAKYDKVEPHAADDQQWRKEFEPFYDYADVCRVVVKGDGYGSLSDGYGS 1316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 962245 971512 + BLOR17998 Blo07g00066 62590

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00066 1316 MobiDBLite consensus disorder prediction 1 25 - -
Blo07g00066 1316 Coils Coil 1205 1243 - -
Blo07g00066 1316 ProSitePatterns Kinesin motor domain signature. 321 332 IPR019821 GO:0003777|GO:0005524|GO:0007018
Blo07g00066 1316 Coils Coil 1101 1128 - -
Blo07g00066 1316 Coils Coil 935 955 - -
Blo07g00066 1316 PANTHER CENTROMERE PROTEIN E 64 1296 - -
Blo07g00066 1316 Coils Coil 1066 1086 - -
Blo07g00066 1316 MobiDBLite consensus disorder prediction 40 54 - -
Blo07g00066 1316 Coils Coil 433 460 - -
Blo07g00066 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 458 IPR027417 -
Blo07g00066 1316 MobiDBLite consensus disorder prediction 685 709 - -
Blo07g00066 1316 MobiDBLite consensus disorder prediction 1 77 - -
Blo07g00066 1316 Gene3D Kinesin motor domain 90 460 IPR036961 -
Blo07g00066 1316 PANTHER KINESIN-LIKE PROTEIN KIN-12B 64 1296 - -
Blo07g00066 1316 SMART kinesin_4 96 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 PRINTS Kinesin heavy chain signature 156 177 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 PRINTS Kinesin heavy chain signature 322 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 PRINTS Kinesin heavy chain signature 287 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 PRINTS Kinesin heavy chain signature 376 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 Pfam Kinesin motor domain 138 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo07g00066 1316 ProSiteProfiles Kinesin motor domain profile. 98 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00066 K10400 KIF15; kinesin family member 15 - csv:101216258 1618.59
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00025 Blo07g00066 CCT
Blo01g00025 Blo07g00066 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00495 Blo-Chr4:4104420 Blo07g00066 Blo-Chr7:962245 1.34E-22 dispersed
Blo07g00066 Blo-Chr7:962245 Blo07g00875 Blo-Chr7:27461134 3.63E-06 dispersed
Blo07g00066 Blo-Chr7:962245 Blo03g01111 Blo-Chr3:37577728 1.13E-66 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g244 Blo01g00025 . . . . . . Bma05g00987 . . . . Car06g01297 . . Cpe08g00117 . . . . . . . . Cla06g00398 Cam06g0419 Cec06g0427 Cco06g0427 Clacu06g0406 Cmu06g0406 Cre06g1185 . Cone15ag0698 . . . . . . . Blo07g00066 Bda11g00439 . Bpe05g00795 Bpe13g00757 . Bma06g01400 . . . . . . . Cpe12g00346 . Bhi12g01988 . . . . . Lcy12g0897 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005762 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00066 Blo_Chr07 FPKM 8.092105 10.21754 2.073592 3.706198 14.961238 11.960014 20.354815 1.493134 2.611022 1.694126