Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00067 ATGGAAAAGGAGTTTTTCCTCAATGAAAGAGATGGCACTAGCACTCCTCAGACGGCCTGGAATTACTCGCAACTTCAGAGCTCCATTTACAACCAGAATTGGGAAAATTCGATGGATCAGAGTGATCCCTTTGAGTCTGCTTTGAGCTCCATTGTATCTTCTCCTGTAGCTTCCTCCGCCATCAACGGCGGTGGAGGAGAAAATTTCATGCTCAGAGAACTTATAGGAAGGCTCGGAAGCATCTGCAATTCCGGCGAGATTTCGCCGCATTCTTATGTTGGAGGAAGTAATAATACTTCTTGTTATAACACTCCATTAAATTCCCCTCCGAAGCTTAATTTATCAATGCCCGATCCGCGTGCCAGAGCTGGTTTTCAGTTTTCAGCTCATCATTTGCCTTCCCATCCAAATATTTCTCCATTTTCAGCGGACCCGGGGTTTTCAGAAAGAGCTGCGAGGTTTTCATGCTTTAATAACAATGGCAGCTTCAACGGGCGAATGGGTTTGAAAGAAACTGAAAAGACGGTTCGATCGATTTCTAGAGTTGATTCAGGCAAGTTCTCTAGAGTTTGTGCTCACCAATCGAAATCAGGAGGTCAAGAAGGCAAAGACGGGAATTCGATTCCAGAGAAGAAGTTCAACTGGTTTTCTAGATCTTCAACTCCAGAATATACAGAATTTGGGGGTTCTAGAGAAGGATCTACACTTTCTGAGCAGAACCCAGCTCGGGAATCGAGAGTAAAAATCAAAGGAGATTATAATTCAAGAAAAAGAAAATCAATTCCTAAAGGAGAAGCAAAAGAATCCAAGGCAGCAGAAGAGAAAGACGAATCAAAAACAAAGAAAAACAAACAAAATGAAGCTTCTGGGAATGAAAAGGATGCTTCAAAGGCAAAGGCAGAACCAACTGCAGACATGAAAGATGAACAAGATGGGAATCAGAAACAGACAAAGGAAAACTCAAAGCCTCCAGAACCTCCAAAAGATTACATCCATGTCAGGGCCAGAAGGGGTCAGGCAACTGATAGCCATAGTTTGGCTGAAAGAGTTAGAAGGGAGAAAATAAACAAAAGAATGAAATTTCTTCAGGATCTGGTTCCTGGATGTGACAAGGTAACAGGAAAAGCAGTGATGCTTGATGAAATTATAAACTATGTCCAGTCTTTGCAGCGCCAAGTTGAATTTCTATCTATGAAATTATCGACCATTAATCCAAGGTTGGACATAACTATGGAGGGTCTTCTGCCAAAAGATGTCTTTCAGTCTCGTGGGTCTTTTCCACGTACTCTTCATAATTCAGATCCATCGGTTCCACCATTTTCCTCTTGTTTTCAGCCTCTGCAATTCCCGGCCATTAATGGCAGAGCCTCTTCTGGGGCAGAGTTGAATCTTCCTATGAACTCTTTAAATGAAGTATTTAGAAGAAATAATCTTCATGCTGGATATGGAGAATCTTCGCACCAAGTTTCAGAATTCTGGGAAGACGACCTCCACAGTGTAGTTCAAATGGGTTATGATCAGAATCAGCAAAAGAGCTTTCATGGTAACAAGAATTTCATCTTGCTCTTACTGAATTAA 1578 41.7 MEKEFFLNERDGTSTPQTAWNYSQLQSSIYNQNWENSMDQSDPFESALSSIVSSPVASSAINGGGGENFMLRELIGRLGSICNSGEISPHSYVGGSNNTSCYNTPLNSPPKLNLSMPDPRARAGFQFSAHHLPSHPNISPFSADPGFSERAARFSCFNNNGSFNGRMGLKETEKTVRSISRVDSGKFSRVCAHQSKSGGQEGKDGNSIPEKKFNWFSRSSTPEYTEFGGSREGSTLSEQNPARESRVKIKGDYNSRKRKSIPKGEAKESKAAEEKDESKTKKNKQNEASGNEKDASKAKAEPTADMKDEQDGNQKQTKENSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKINKRMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTINPRLDITMEGLLPKDVFQSRGSFPRTLHNSDPSVPPFSSCFQPLQFPAINGRASSGAELNLPMNSLNEVFRRNNLHAGYGESSHQVSEFWEDDLHSVVQMGYDQNQQKSFHGNKNFILLLLN 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 975466 977636 - BLOR17999 Blo07g00067 62591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00067 525 PANTHER TRANSCRIPTION FACTOR BHLH78-LIKE ISOFORM X1 26 514 - -
Blo07g00067 525 MobiDBLite consensus disorder prediction 212 242 - -
Blo07g00067 525 Coils Coil 281 301 - -
Blo07g00067 525 CDD bHLH_AtBPE_like 329 414 - -
Blo07g00067 525 SMART finulus 345 395 IPR011598 GO:0046983
Blo07g00067 525 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 389 IPR011598 GO:0046983
Blo07g00067 525 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 407 IPR036638 GO:0046983
Blo07g00067 525 Gene3D - 336 409 IPR036638 GO:0046983
Blo07g00067 525 MobiDBLite consensus disorder prediction 243 330 - -
Blo07g00067 525 Pfam Helix-loop-helix DNA-binding domain 343 390 IPR011598 GO:0046983
Blo07g00067 525 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 26 514 IPR024097 GO:0006355
Blo07g00067 525 MobiDBLite consensus disorder prediction 180 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00277 Blo-Chr1:3498291 Blo07g00067 Blo-Chr7:975466 2.25E-114 dispersed
Blo01g00466 Blo-Chr1:5141924 Blo07g00067 Blo-Chr7:975466 4.66E-66 dispersed
Blo01g01485 Blo-Chr1:54299482 Blo07g00067 Blo-Chr7:975466 5.58E-47 dispersed
Blo05g00410 Blo-Chr5:5195203 Blo07g00067 Blo-Chr7:975466 1.74E-76 dispersed
Blo06g00398 Blo-Chr6:23064680 Blo07g00067 Blo-Chr7:975466 1.10E-81 dispersed
Blo07g00067 Blo-Chr7:975466 Blo16g01072 Blo-Chr16:39276599 5.75E-64 dispersed
Blo13g00032 Blo-Chr13:522851 Blo07g00067 Blo-Chr7:975466 2.57E-45 dispersed
Blo12g00154 Blo-Chr12:10470222 Blo07g00067 Blo-Chr7:975466 3.03E-104 wgd
Blo02g00401 Blo-Chr2:4969557 Blo07g00067 Blo-Chr7:975466 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12563 PF00010 HLH 5.20E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00067 - - vvi:100259005 543.502