Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00079 ATGGGAAGGTCTTTTCTTCAAGTTGCAGCCACTGAGGAGGTTGCTCCCTCTCTGAGAGTGGTTCAGATTGAAGGATTGGTAATCTTAAAGATAATCAAACACTGCAAGGAGTTTTCACCAGCTCTCGTCACAGGGCAACTTCTCGGATTAGATGTTGGTAGCATTCTAGAAGTTACTAACTGCTTTCCCTTCCCGATACGAGAGGAAGATGAGGAGATTGAAGCAGAGGGTGCTAATTACCAGCTCGACATGATGAGATGTTTGAGAGATGTCAATGTTGACAATAACACCGTTGGATGGTACCAATCTACCTTCTTAGGTTCTTATCAAACATCAGAATTGATCGAAACCTTTATGAATTACCAGGAAAGTATTAGACGGTGTGTCTGCATAATTTATGATCCGTCGCGATCCAATCAAGGTGTCTTAGCTCTCAAGGCATTGAAGCTTTCTGATTCATTTATGGAGCTTTACCGAAGTAAAAATTTTACAGGAGAGAAATTGAGGGAGAACAACTTATCTTGGGTGGATATATTTGAAGAAATACCTATTAAAGTTCTGAATTCTGCCCTTATCAGTGCTTTTATGTCAGATCTGGAAGCAGATACCCCTGTCACTCAGTGTGACTATGATCGGCTGCAACTTTCTACGAAACCGTTTGTGGAAAGGAATATTGAATTTCTGATTGAATGTATGGATGATTTGTCAGTGGAGCAGCAAAAGTTCCAATTCTATAATCGAAATCTGTCACGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAAAGAAGAACTGAGAACATGGGGCGAAAAGCAGCTGGTGAAGAACCTTTACCAGAGGAGGATCCTTCAAATCCAATCTTTAAGCCTATTCCCGAGCCATCACGGTTGGATAGCTTCCTCATAACAAATCAAATTGGGAACTACTGTAACCAAATAAATGGGGTTGCTGGACAGAGCTTTAGCAGATTGTACTTAGTGAAAGCATTGCACGACAACAATTCATAA 1008 41.27 MGRSFLQVAATEEVAPSLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSILEVTNCFPFPIREEDEEIEAEGANYQLDMMRCLRDVNVDNNTVGWYQSTFLGSYQTSELIETFMNYQESIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSKNFTGEKLRENNLSWVDIFEEIPIKVLNSALISAFMSDLEADTPVTQCDYDRLQLSTKPFVERNIEFLIECMDDLSVEQQKFQFYNRNLSRQQAQQQAWLQKRRTENMGRKAAGEEPLPEEDPSNPIFKPIPEPSRLDSFLITNQIGNYCNQINGVAGQSFSRLYLVKALHDNNS 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1140088 1143842 - BLOR18011 Blo07g00079 62603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00079 335 MobiDBLite consensus disorder prediction 256 290 - -
Blo07g00079 335 Gene3D Cytidine Deaminase, domain 2 3 210 - -
Blo07g00079 335 MobiDBLite consensus disorder prediction 264 278 - -
Blo07g00079 335 CDD MPN_eIF3h 19 282 IPR027524 GO:0003743|GO:0005737|GO:0005852
Blo07g00079 335 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 17 123 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo07g00079 335 SMART pad1_6 20 153 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo07g00079 335 ProSiteProfiles MPN domain profile. 21 154 IPR037518 -
Blo07g00079 335 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 1 333 - -
Blo07g00079 335 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 1 333 - -
Blo07g00079 335 Pfam C-terminal region of eIF3h 139 333 IPR045810 -
Blo07g00079 335 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 16 333 IPR027524 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00079 Blo-Chr7:1140088 Blo18g00834 Blo-Chr18:24587297 3.48E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00079 K03247 - twl:120013111 584.334