Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00090 ATGGAGAGACAAAACCAAGTAGAGAGAGATTGCGGGGAAAGGAAGCCGGAGATGGCTGCCTACTCTTACGAAGAATCAGAATCTTGGCTTTCTGACTACCCAGAAGATGTAAATTCGGAAAATTCAACTGAGTTTGGCTCGGAATTTGATATATGGTCGAGAATGAAGAGCGAATCGATGGTGACGACGACGAAGAAGAAGAAGAAGAACCAGGTTCTGTTAGAAGGTTATGTTGAGGCTGCAGATGAGGATGATTTAACCAGAACGAAGAGCTTGACCGATGAAGATCTGGATGAACTCAAAGGCTGCTTAGATCTGGGATTTGGGTTTAGTTACGATGAGATTCCGGAGCTCTGCAACACTCTGCCGGCGCTAGAGCTCTGTTATTCGATGAGTCAGAAGTTCATCGACGACCACCAGAAGTCGCCGGAGAATTCTCCGGCCGCATCGTCAGATTCATGCTCCACCACTTCTAGCCCTATTGCGAATTGGAAAATCTCCAGCCCCGGTGATCATCCAGAAGATGTAAAAGCAAGGCTCAAATATTGGGCTCAGGCGGTGGCTTGTACAGTGAGATTATGCAGCTGA 588 47.28 MERQNQVERDCGERKPEMAAYSYEESESWLSDYPEDVNSENSTEFGSEFDIWSRMKSESMVTTTKKKKKNQVLLEGYVEAADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFIDDHQKSPENSPAASSDSCSTTSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1307019 1307698 + BLOR18022 Blo07g00090 62614

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00090 195 Pfam Protein of unknown function (DUF1685) 92 148 IPR012881 -
Blo07g00090 195 PANTHER OSJNBA0071G03.3 PROTEIN 40 195 - -
Blo07g00090 195 MobiDBLite consensus disorder prediction 143 165 - -
Blo07g00090 195 MobiDBLite consensus disorder prediction 139 170 - -
Blo07g00090 195 PANTHER EXPRESSED PROTEIN 40 195 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00090 - - - jre:108980121 259.996
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00090 Blo-Chr7:1307019 Blo11g00457 Blo-Chr11:4046704 2.40E-26 dispersed
Blo14g00873 Blo-Chr14:32494339 Blo07g00090 Blo-Chr7:1307019 3.80E-08 transposed
Blo02g00429 Blo-Chr2:5613288 Blo07g00090 Blo-Chr7:1307019 1.80E-87 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1193 . . . . . . . . . . Cma06g01664 . Car06g01406 Car14g01297 . Cpe08g00077 Cpe03g01232 . . . . . . . . . . . . . . Cone14ag0576 . . Cone11ag0614 . . . Cme07g01904 . Blo07g00090 . . . . . Bma06g01421 . Cmo06g01658 . . . Car08g00063 . . Cpe17g00989 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001176 2 2 2 2 2 2 5 2 2 2 1 2 3 2 2 4 2 3 4 2 2 2 2 2 2 2 2 8 6 1 77
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00090 Blo_Chr07 FPKM 7.558816 4.8523 7.052669 8.398442 8.626508 7.731621 9.150061 20.651178 19.68121 22.050995