Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00112 ATGAAAATCCAGTGCGATGTTTGCGAGAAAGCTCCGGCGACGGTGATATGTTGTGCAGACGAGGCGGCACTGTGTGCGAAATGCGATATTGAAGTTCATGCAGCAAACAAACTTGCGAGCAAGCACCAGAGGCTTCGTCTGGAATGTCTCTCCACCAAGCTACCTAAATGCGACATTTGCCAAGACAAGATAGCTTTCATCTTCTGCGTCGAAGATAGGGCCCTGCTTTGTCGAGATTGTGACGAACCAATTCACTCGGCTGGTGGCCTTTCTGCAAATCACCAGAGGTTTCTTGCCACTGGAATCCGAGTGGCTCTGAGTTCCGATTGTGGAATGGATAAACAAAAGAATTGCATTGAACCTCCTCACCAGAAGATTCAACAACAATCTCATAAAATGCCTATACATCGAGATTCTAGTTTCACATCGCCATGGCCTGCTGACGATGTGCTTCGGTTTTCAGATTTAGAATCGGCTAATAAGAATGGGTCATTGGAGTTTGGAGAGCTTGATTGGCTGGCAGACATGGGTCTTCTGTTTGAGCAGATTCCTCGAGAGGGTGTAGCAGCGGCTGAAGTTCCTCAACTGTCAATGTCTCAAGCAAGTTTTGCCATGTCCAACCGACCCAAAATAGGCAGTCCACCAAACAAGAAGCCCCGGATTGAGATCGATGAAGGCGATGATCACGAGTACTTCACTGTTCCAGATCTCGGATGA 717 47.7 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLRLECLSTKLPKCDICQDKIAFIFCVEDRALLCRDCDEPIHSAGGLSANHQRFLATGIRVALSSDCGMDKQKNCIEPPHQKIQQQSHKMPIHRDSSFTSPWPADDVLRFSDLESANKNGSLEFGELDWLADMGLLFEQIPREGVAAAEVPQLSMSQASFAMSNRPKIGSPPNKKPRIEIDEGDDHEYFTVPDLG 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1568502 1570078 - BLOR18044 Blo07g00112 62636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00112 238 MobiDBLite consensus disorder prediction 204 238 - -
Blo07g00112 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Blo07g00112 238 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 238 - -
Blo07g00112 238 Gene3D Classic Zinc Finger 1 92 - -
Blo07g00112 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Blo07g00112 238 MobiDBLite consensus disorder prediction 215 238 - -
Blo07g00112 238 CDD Bbox1_BBX-like 5 47 - -
Blo07g00112 238 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Blo07g00112 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Blo07g00112 238 CDD Bbox1_BBX-like 56 98 - -
Blo07g00112 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Blo07g00112 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00195 Blo07g00112 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00195 Blo-Chr1:2610431 Blo07g00112 Blo-Chr7:1568502 5.88E-96 dispersed
Blo07g00112 Blo-Chr7:1568502 Blo18g00789 Blo-Chr18:22814417 7.94E-39 dispersed
Blo07g00112 Blo-Chr7:1568502 Blo07g00980 Blo-Chr7:29282753 4.79E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12567 PF00643 zf-B_box 1.10E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00112 - - jre:109005469 350.132