Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00125 ATGAAGCAGAAAGAGACGTCCACAGCTTCTGCGAAAGGCGCGTCTCTGCCTGCGGCACTTTCTCGACTCACAGCTTCTTCTAGTGCCAAGGTTTCTCCGAAACCAGGCTCTTTCAACGACGTATCTTCGCCTTCTCTTAAATCAAGAACCAATTCTGCAACTCCGAAGAGTAGGAGATCTCTGGTTTTGAATAGGACTGATTCGGGAAAGGAAACGGCAGTAGGTCAACAGGCTGAGAATCTCGACGGTGTTAGAGTCGTTGGTCCCGCTCGCCCTCCTGTCGAGCGAATTCCGCAGTTGAGACGGCACCAGCAGTCGAATAATAGCATAATTACGGCTACGAGAGGAGACGATTCCGACAGGAAGAGAATTGATTTGCAAAAGAAGCTTTACTTGAAAGAGAATATGATTAATGATTTGCGGTCCCAAGTGTCGAGTCTGATCGCAGAGCTGGATAAATTGAAATGCGCGAATGTGGAACTGCAGTTACAGAATAGTAAGCTATCGCGAGATCTTGCCGCTGCTGAAGAGAAAATAGTTGCTCTTAGCTGTAATAAGCAGTCACTTGCAGAGTATCAGAACCCTCGATTAGAAGAGATTCGTAACGCCATTGTCGACAAAACAAAGCGTTTGATGGAAAAAACAGATGAAATCAATGACAAAATCAAGACTAAGACACCAGCATCTACACCATTATCTCTAACTCAGAGAATGTCAGAACTCGGGGGCAACACTCCACTCTCCATGTCACTTCCACCACCTCCTCCCCCTCCTCTCCCACCTCGGCGCTCCTCCACAGCCATTGTTGCTCAAAAGTCTCCACATCTTGTACAACTTTTTCACTCATTAACAAAGAAAGAGAGGGAGAGAGATTCTCCAACGTCCGAAAAATTTCATAATCTGTCACCTGTTACAGCACACAGAAGCATTGTGGGAGAAATTCAAAATCGATCAGCCCATCTATTAGCTATCAAAGCTGACATTGAATCAAAAGGAGATTTCGTGAATGGCCTTATTGAAAAGGTGCTCGCTTCTGCTTTCACAGATATAGAAGAAGTCCTTAAATTTGTGGATTGGCTTGATGGAGAACTATCATCATTGTCTGACGAGAGGGCCGTATTAAAGCATTTCAAGTGGCCTGAGAGAAAAGCTGATGCCATGAGAGAAGCCGCTGTTGAATTTCGTGCCCTTAAACTTCTGGAAAGGGAGATTCGATTGTATAAGGATGACACTCGAATTCCATGTGAGAATGCCTTGAAGAAGATGACCAGCCTTTTAGACAAGTCAGAACAAAGTGTTCAATTGTTGATCAAGCGAAGAAATACAGTTATGCGATCATACCAAGATTGCAAAATTCCAATTGATTGGATGCTTGATACGGGAATGGAGAATAAAATAAAGAAAGCATCCATGAATCTGGCAAAAATGTACATGAAAAGAGTGAAAATGGAGCTGGAATTAAGTCGTACTACAAGCAGGGAATCGATTCAAGAGTCTCTTCTCCTTCAGGGCATACGTTTTGCATACAGGACTCATCAGTTTACGGGAGGTCTTGATTCTGAGACAATGTGCACTTTTGAAGAGATCAGACAAAACACCCCTCCAACCCCACACCTCTCGGATTTGTTGGCCGGCATCCCGTCATCGTAG 1650 44.3 MKQKETSTASAKGASLPAALSRLTASSSAKVSPKPGSFNDVSSPSLKSRTNSATPKSRRSLVLNRTDSGKETAVGQQAENLDGVRVVGPARPPVERIPQLRRHQQSNNSIITATRGDDSDRKRIDLQKKLYLKENMINDLRSQVSSLIAELDKLKCANVELQLQNSKLSRDLAAAEEKIVALSCNKQSLAEYQNPRLEEIRNAIVDKTKRLMEKTDEINDKIKTKTPASTPLSLTQRMSELGGNTPLSMSLPPPPPPPLPPRRSSTAIVAQKSPHLVQLFHSLTKKERERDSPTSEKFHNLSPVTAHRSIVGEIQNRSAHLLAIKADIESKGDFVNGLIEKVLASAFTDIEEVLKFVDWLDGELSSLSDERAVLKHFKWPERKADAMREAAVEFRALKLLEREIRLYKDDTRIPCENALKKMTSLLDKSEQSVQLLIKRRNTVMRSYQDCKIPIDWMLDTGMENKIKKASMNLAKMYMKRVKMELELSRTTSRESIQESLLLQGIRFAYRTHQFTGGLDSETMCTFEEIRQNTPPTPHLSDLLAGIPSS 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1702026 1705472 - BLOR18057 Blo07g00125 62649

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00125 549 Coils Coil 137 185 - -
Blo07g00125 549 MobiDBLite consensus disorder prediction 1 74 - -
Blo07g00125 549 Coils Coil 197 217 - -
Blo07g00125 549 MobiDBLite consensus disorder prediction 248 263 - -
Blo07g00125 549 PANTHER F11A17.16 1 548 - -
Blo07g00125 549 MobiDBLite consensus disorder prediction 224 246 - -
Blo07g00125 549 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 548 IPR040265 -
Blo07g00125 549 MobiDBLite consensus disorder prediction 216 265 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00125 - - - pavi:110764117 497.278
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00125 Blo-Chr7:1702026 Blo14g00431 Blo-Chr14:4920326 5.74E-91 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g269 . . . . . . . . . . . . Car06g01351 . Sed12g0731 Cpe08g00129 . Bhi01g01139 Tan10g1128 Cmetu06g1150 . Hepe05g1340 . Lcy11g1300 . . . . . . . . . . . . . . Cme06g00837 . Blo07g00125 . . . . . . . Cmo06g01585 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013373 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 2 1 1 27
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00125 Blo_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.279425 0.351694 0.230313