Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00132 ATGGCGAAACATGAAGAGCTACCCATCCCCATATTCTCTACCTTGGAGCCTGTCTATGGTGACGGCTCTCAGCTCGAAGAAGCTCAGCTTCGATTCGACTATTTGAAGTCCAAATTTGTTCAGGTCTTCGGCCACCCGCCTGAGGTTTTCGCTCGCTCTCCCGGTAGAGTAAACTTGATCGGCGAGCACATTGATTATGAGGGTTACTCGGTGTTGCCCATGGCGATTCGCCAAGATACTATCGTCGCAATAAGGAAGAATTATGGCGAAAAGCTTCTCAGAATTGCTAATGTGAATGGCAAATATTCCATTTGCTCTTATCCTGCTGATCCTGATCAGGAAATTGATTTGAAGAATCACAAATGGGGGCATTATTTTGTTTGTGGGTACAAAGGCTTTAATGAATATGCTAGATCGAAAGGAATTGATGTTGGATTACCGGTCGGACTCGATGTTCTTGTTGATGGCACAGTTCCTACAGGCTCTGGTCTGTCAAGCTCTGCAGCATTTGTTTGCTCGTCCACTATTGCCATAATGGCTGCCTTTGATGTGAATTTTCCTAAGAAAGAAATTGCCCAGCTTACATGTGATTGCGAGAGACACATTGGTACACAATCCGGTGGAATGGATCAAGCAATTTCAGTTATGGCCAAATCTGGGTTTACAGAGTTGATTGAATTTAATCCAATTCGAGCCACTGATGTGAAACTTCCGGCCGGTGGAACTTTTATCATAGCTCATTCTTTGGCGGAATCGCAGAAAGCAGTCACGGCTGCTACGAATTACAATAACAGAGTTGTCGAATGTCGGCTTTCTGCAATCGTTCTTGGGATAAAGCTCGGAATGAAACCAAAAGAAGCAATATCGAAAGTGAAAACACTGTCTGACGTTGAAGCGTTGTGCTCATCGTTTGCCTCTGGTCATGGCTCGTCAGATCCCCTACTTGCTGTCGAGGTCCTATTGAAGGAAGAACCTTATACTGCTGAAGAGATCGAGGAACTCATCGAGGAAAATCTATCATTGGTCTTGGGCGATTCTCCGACATCACTGGACGTGTTGAAAGCCGCAAAGCACTTCAAGTTGCATCAGAGAGCCTCTCATGTCTACTCCGAAGCCAGAAGAGTGTACGTGTTTAAGGACACCGTATCGTCCAATTTAAATGAGGAAGATTTGTTGAAGAAGCTTGGGGATCTTATGAATGACAGCCATTACAGCTGCAGTGTCCTCTACGAGTGCAGCTGTCCGGAGTTGGAAGAACTGGTAAATATATGCCGAGAAAATGGTGCGTTGGGGGCAAGGCTGACGGGGGCAGGATGGGGAGGTTGTGCAGTTGCTTTGGTTAAAGAGAGCATGGTCCCTAAGTTTATCCTCGATTTGAAGGAAAGCTTCTACCAATCAAGGATTGATAAAGAGATGATCAACAGGAATGATCTTGGTCTCTACATCTTTGCTTCCAAGCCTTCAAGTGGAGCTGCAATATTCAAGTTTTAG 1491 45.2 MAKHEELPIPIFSTLEPVYGDGSQLEEAQLRFDYLKSKFVQVFGHPPEVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNYGEKLLRIANVNGKYSICSYPADPDQEIDLKNHKWGHYFVCGYKGFNEYARSKGIDVGLPVGLDVLVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKEIAQLTCDCERHIGTQSGGMDQAISVMAKSGFTELIEFNPIRATDVKLPAGGTFIIAHSLAESQKAVTAATNYNNRVVECRLSAIVLGIKLGMKPKEAISKVKTLSDVEALCSSFASGHGSSDPLLAVEVLLKEEPYTAEEIEELIEENLSLVLGDSPTSLDVLKAAKHFKLHQRASHVYSEARRVYVFKDTVSSNLNEEDLLKKLGDLMNDSHYSCSVLYECSCPELEELVNICRENGALGARLTGAGWGGCAVALVKESMVPKFILDLKESFYQSRIDKEMINRNDLGLYIFASKPSSGAAIFKF 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1807661 1811106 - BLOR18064 Blo07g00132 62656

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00132 496 PRINTS Galactokinase signature 149 167 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Blo07g00132 496 PRINTS Galactokinase signature 363 377 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Blo07g00132 496 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Blo07g00132 496 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Blo07g00132 496 Gene3D - 37 235 IPR014721 -
Blo07g00132 496 SUPERFAMILY GHMP Kinase, C-terminal domain 242 472 IPR036554 -
Blo07g00132 496 PANTHER BNAA01G32760D PROTEIN 1 495 - -
Blo07g00132 496 TIGRFAM gal_kin: galactokinase 35 471 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Blo07g00132 496 ProSitePatterns GHMP kinases putative ATP-binding domain. 158 169 IPR006203 GO:0005524
Blo07g00132 496 Gene3D - 261 411 - -
Blo07g00132 496 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 239 IPR020568 -
Blo07g00132 496 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 495 - -
Blo07g00132 496 Pfam GHMP kinases N terminal domain 151 216 IPR006204 GO:0005524
Blo07g00132 496 PIRSF Galactokinase 23 496 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Blo07g00132 496 Gene3D - 236 465 - -
Blo07g00132 496 Pfam Galactokinase galactose-binding signature 38 86 IPR019539 -
Blo07g00132 496 PRINTS Mevalonate kinase family signature 156 178 - -
Blo07g00132 496 PRINTS Mevalonate kinase family signature 53 77 - -
Blo07g00132 496 PRINTS Mevalonate kinase family signature 198 217 - -
Blo07g00132 496 PRINTS Mevalonate kinase family signature 431 448 - -
Blo07g00132 496 Pfam GHMP kinases C terminal 392 464 IPR013750 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00132 K18674 GALK2; N-acetylgalactosamine kinase [EC:2.7.1.157] - zju:107407595 839.721
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00471 Blo07g00132 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00132 Blo-Chr7:1807661 Blo14g00698 Blo-Chr14:16312834 8.02E-07 dispersed
Blo02g00471 Blo-Chr2:6700954 Blo07g00132 Blo-Chr7:1807661 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g44 . . . . . Bpe14g01089 . . . . Cma06g01572 Cma14g01579 Car06g01336 Car14g01390 Sed02g1128 Cpe08g00143 Cpe03g01318 Bhi01g01101 Tan10g1088 Cmetu06g1064 . Hepe05g1365 . Lcy11g1328 . . . . . . . . Cone15ag0720 . . Lsi05g01410 . . Cme06g00801 Blo02g00471 Blo07g00132 . Bda13g00226 . . Bma02g00937 . . Cmo06g01566 Cmo14g01611 . . . . . . . . . . . . . Cla05g00717 Cam05g0784 Cec05g0790 Cco05g0786 Clacu05g0774 Cmu05g0739 Cre05g0813 . Csa03g01530 Chy06g00767 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005121 1 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 4 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00132 Blo_Chr07 FPKM 3.660558 4.817832 0.0 0.228378 0.475075 0.587695 0.756985 0.618761 0.886047 0.999509