Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00139 ATGAGTGTAAATGCAACAGTGCTTGGAGTTCCTCTTCCTTCCAATCTCAACTTCAACGACGCCAGCCCGGAATGGATGAACAAAGGAGACAACGCTTGGCAACTCACGGCAGCAACGCTTGTCGGGCTACAGAGCGTTCCGGGGCAGATAATTCTGTACGGTGCGGCGGTGAAGAAGAAATGGGCTATAAACTCAGCGTTCATGGGGCTCTACGCCTTTGCCTGCGTTCTTATCTGTTGGGTTTTATGGGGTTATAGATTGTCGTTCGGAAATAAACTCACTCCGTTTTGGGGAAAAGTTAATGTAGCTGTAGATCAGAAGTTCTTGCTTCGTCAAGCATTTGCTGGGATGTTCCCTAACGCAACAATGGTGTATTTCCAGTTCGTCTTTGCAGCGATTACTCTGATTCAGATCTCTGGTTCAGTTTTGGGTCGGATGAATTTTTTAGCTTGGATGCTGTTTGTGCCTATATGGCTTACTTTTTCCTACACCGTCGGAGCGTTTTCCATTTGGAGTCCAAACGGATTCTTCACCAAACTCGGACTCATCGATTATTCCGGCGGTTATGTAATTCATCTGTCGTCCGGAGTGGCCGGTTTCACCGCAGCATATTGGGTGGGTCCACGTATGTCGACTGACCGGGAAAACTTTCATCCGAACAACGTCCTTCTCATGCTCGCCGGAGCGGGTTTGCTCTGGATGGGATGGACGGGATTCAACGGCGGAGACCCTTATGTCGTCAGTGTTGATGCTTCGTTGGCTGTTTTGAACACTCATATCTGCACTGCAGCTAGTCTGCTCACTTGGCTTGCTCTTGATGTCGTCTTCTTTAAAAAACCTTCCATTGTCGGCGCCATTCAAGGCATGATGACTGGTTTGGTCTGCATTACGCCCGCAGCTGGCGTAGTCGAAGGATGGGCAGCAATATTAATGGGAATATCATCAGGCTCAATTCCATGGTTTACAATGATGGTTGTCCACAAGAAGTCTAAGCTCCTCCAAATGGTGGACGACACAATGGCCATCTTCCACACTCACGCGGTGACCGGAAGCCTCGGTGGAATCCTTTCCGGCCTCTTTGCCAAGCCAAGCCTATGCTATTTGTTTTACAACACTTACGATAATCATGTCGGCCTATATTACGGCTTCCAAATGGGATCTGTTCATAAGGGGTTTCGGCAAATCGAAATTCAACTTTTTGGGATCTTATTCATCGTTATTCTCAATGTTGTTACTACAAGTTTGACTTGTTTGTTCGTGCAACTGATTGTTCCACTAAGGATGTCCGAGGCAGACATTGGCATTGGAGATGAAGCTGCTCATGGGGAAGAAGCTTATGCCATATGGGGAGATGGAGAAAAGCTTCCAAAATTTAAGCATGGTGGAATGAGTTCTAGTGATGTTGAAATTGGAAAGGCTTGA 1422 47.05 MSVNATVLGVPLPSNLNFNDASPEWMNKGDNAWQLTAATLVGLQSVPGQIILYGAAVKKKWAINSAFMGLYAFACVLICWVLWGYRLSFGNKLTPFWGKVNVAVDQKFLLRQAFAGMFPNATMVYFQFVFAAITLIQISGSVLGRMNFLAWMLFVPIWLTFSYTVGAFSIWSPNGFFTKLGLIDYSGGYVIHLSSGVAGFTAAYWVGPRMSTDRENFHPNNVLLMLAGAGLLWMGWTGFNGGDPYVVSVDASLAVLNTHICTAASLLTWLALDVVFFKKPSIVGAIQGMMTGLVCITPAAGVVEGWAAILMGISSGSIPWFTMMVVHKKSKLLQMVDDTMAIFHTHAVTGSLGGILSGLFAKPSLCYLFYNTYDNHVGLYYGFQMGSVHKGFRQIEIQLFGILFIVILNVVTTSLTCLFVQLIVPLRMSEADIGIGDEAAHGEEAYAIWGDGEKLPKFKHGGMSSSDVEIGKA 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1877222 1879713 - BLOR18071 Blo07g00139 62663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00139 473 Pfam Ammonium Transporter Family 32 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo07g00139 473 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo07g00139 473 PRINTS Rhesus blood group protein signature 223 241 IPR002229 GO:0005887
Blo07g00139 473 PRINTS Rhesus blood group protein signature 127 143 IPR002229 GO:0005887
Blo07g00139 473 PRINTS Rhesus blood group protein signature 254 276 IPR002229 GO:0005887
Blo07g00139 473 Gene3D Ammonium transporter AmtB like domains 13 449 IPR029020 -
Blo07g00139 473 SUPERFAMILY Ammonium transporter 25 428 - -
Blo07g00139 473 TIGRFAM amt: ammonium transporter 30 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo07g00139 473 PANTHER AMMONIUM TRANSPORTER 10 470 - -
Blo07g00139 473 PANTHER AMMONIUM TRANSPORTER MEP2 10 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00269 Blo-Chr6:14480165 Blo07g00139 Blo-Chr7:1877222 0 dispersed
Blo06g00424 Blo-Chr6:24638389 Blo07g00139 Blo-Chr7:1877222 0 dispersed
Blo07g00139 Blo-Chr7:1877222 Blo07g01119 Blo-Chr7:31092759 1.23E-178 dispersed
Blo07g00139 Blo-Chr7:1877222 Blo07g00141 Blo-Chr7:1892938 0 proximal
Blo02g00477 Blo-Chr2:6850474 Blo07g00139 Blo-Chr7:1877222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00139 K03320 - twl:119984133 734.176