Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00144 ATGGCTACTGGACAACTCTTCTCTCGCACTACTCAAGCTTTATTTTACAACTACAAGCAACTTCCCATTCAGAGGATGCTAGATTTTGACTTCCTTTGCGGTGTGGAAACTCCATCAGTTGCTGGAATAATTAACCCTGGGGCTGAGGGATTTCAAAAACTATTTTTTGGTCAAGAAGAAATTGCTATTCCAGTGCATTCAGCGATTGAAGCAGCCTGTGCTGCACATCCTACTGCAGATGTTTTCATCAATTTCGCATCTTTTAGAAGTGCTGCTGCTTCATCAATGGCTGCTTTGAAACAGCCAACAATAAGAGTTGTGGCTATCATAGCTGAAGGTGTTCCGGAGTCAGACACCAAGCAATTGATTGCATATGCACGTGCAAACAATAAGGTTGTTCTTGGGCCAGCTACTGTTGGAGGCATTCAAGCGGGAGCATTTAAGATTGGTGACACTGCAGGAACAATTGATAATATAATTCAGTGCAAGTTGTATAGGCCAGGCTCTGTTGGTTTCGTATCCAAATCCGGCGGGATGTCTAATGAATTGTACAATACCGTTGCACGCGTGACAGATGGAATATATGAAGGAATTGCTATTGGAGGAGATGTTTTTCCAGGGTCTACTCTTTCTGACCACATTTTGCGTTTTAACAACATTCCACAGGTTAAGATGATGGTTGTACTTGGAGAACTTGGGGGGAGAGACGAATATTCTTTAGTTGAAGCACTCAAACAAGGTAAAGTCACCAAACCAGTGGTTGCTTGGGTCAGTGGGACATGTGCTCGGCTCTTTAAGTCCGAAGTTCAATTTGGTCATGCTGGCGCTAAGAGTGGTGGTGAAATGGAATCTGCCCAAGCAAAAAATGAAGCTCTGAGAGAAGCTGGAGCTATAGTGCCCACTTCATACGAGGCCCTTGAAAGTGCAATAAGAGAAACATTTGAGAAGCTGGCCGAACAAGGAAACATCACACCTGTGAAAGAATTTACTCCCCCTCAGATTCCTGAGGACCTTAGCTCAGCAATTAAAAGTGGGAAAGTCCGTGCTCCTACTCATATAATTTCCACTATATCTGATGACAGAGGCATGCTCTATCACCCCTTTTCGCTGTTAGAGCCATGCTATGCTGGAGTGCCTATGTCATCCATTGTAGAACAAGGTTATGGTGTTGGTGATGTTATCTCACTTTTGTGGTTCAAGCGAAGCCTTCCTCGTTACTGTACACATTTCATCGAGATATGTATCATGCTATGTGCCGACCATGGTCCTTGTGTCTCTGGTGCTCACAACACAATAGTAACAGCAAGGGCTGGGAAGGACCTTGTTTCGAGCTTAGTGTCAGGATTGCTTACAATTGGTCCTCGATTTGGTGGTGCCATTGATGATGCTGCACGGTATTTTAAGGATGCTTATGACAGGGGTCTCACACCTTATGAATTTGTTGAAAGCATGAAAAAGAAAGGCATTCGTGTACCAGGAATAGGACACAGGATAAAGAGAGGTGACAATAGAGATAAGAGAGTGGAGCTATTGCAGCGGTTTGCACGCACCCATTTCCCCTCTGTGAAGTACATGGAATATGCTGTGGAGGTCGAAACCTACACGCTCTCGAAGGCAAACAACCTGGTTCTTAATGTAGATGGTGCAATTGGGTCCCTTTTCTTGGATTTGCTTGCCGGCAGTGGACTGTTCAGCAAGCAAGAGATTGATGAAATAGTTGAGATTGGCTACTTGAACGGCCTCTTCGTGCTGGCTCGCGCCATCGGTTTAATCGGGCATACTTTCGACCAGAAGCGATTGAAACAACCATTGTACCGTCACCCCTGGGAGGATGTTCTCTACGCCAAGAATGGTAGGACAGGATTGGTGGGTCAGTGGCAAGTCCTAAAATTTGATGCGAATAATCAAGAGCTTTGTTCTTCTGCTTTCTCGCCGCATCGGGATAGGGGTCAGCTCAGCCAATTGAATCGAATCTCAATTTGTGAGAGACTTTCTGAATCAGGCGAAATAATGGCTTCCGGTAGTAACGCAGCTCAGTCCGAACATCAACAAGGGCAGTCCTCTAACGCAAACACGAGCAACACCGTCGTGCTCCGGTCAGAATCCGTCAGCAAAGCCATAGCGCAGTACACCGTCGATGCTCGTCTCCACGCGGTCTTCGAGCAGTCGGGCAAGTCTGGAAAGTCCTTTGACTACTCCCAGTCTGTGAAAACCTCCACACAATCGGTTCCTGAACAACAAATTACAGGTTACCTTTCCAAGATTCAAAGGGGAGGGCGTATCCAGCCCTTTGGCTGTATGATGGCAGTAGAGGAAGCTAGTTTTCAAGTCATCGCATATAGCTTTAACGCCCAAGAAATGCTAGGCCTCACTCCCCAATCCGTTCCTAACCTGGAAAAGCCAGAAATTCTCACAATCGGTACCGATGTGAGGAGTTTATTCACCCAATCTAGCGTACTTTTACTCGAGAGAGCGTTTAGGTCTCGAGAAATCACCTTGTTGAATCCAGTGTGGATTCATTCGAAGAATTCTGGGAAACCATTCTACGCGATTTTGCATAGAATTGATGTTGGGATTGTGATTGATTTAGAACCTGCAAGGACTGAGGATCCTGCCCTGTCGATTGCAGGGGCAGTGCAGTCTCAGAAGCTAGCGGTTCGAGCTATTTCCCAGCTGCAATCACTTCCGGGCGGTGATGTTAAACTCTTGTGCGATACTGTGGTTGATTGTGTTAGGGAGCTTACTGGTTATGATCGAGTTATGGTATTTAAATTCCACGAAGACGAGCATGGAGAGGTTGTAGCAGAGAGTAAGAAGTCGAATTTAGAGCCGTATATTGGATTACACTATCCAGCAACTGACATTCCTCAGGCTTCGAGGTTTCTCTTCAAGCAGAATCGGGTACGGATGATCGTTGACTGTCATTCAACTCCTGTTCGTGTCATTCAGGATGAAGGATTGGTGCAGCCCTTGTGTTTGGTCGGTTCAACTTTAAGAGCTCCCCATGGTTGTCATGCTCAATACATGGCTAATATGGGTTCGGTCGCATCGTTAGCAATGGCAGTCATTATCAACGGTACTGATAACGAAACGGGTGGTGGCCGGAACTCGATGAGGCTCTGGGGTTTGGTTGTCTGCCACCATAATTCAGCTCGGTGCATCCCCTTCCCGCTCCGTTATGCTTGCGAGTTTCTAATGCAGGCGTTTGGACTGCAACTGAATATGGAACTCCAGTTGGCCTCGCAGTTATCGGAAAAACATGTTTTGAAAACTCAAACTCTTTTGTGCGATATGATTCTTCGAGATTCGCCTGCCGGAATTGTTACCCAAAGTCCGAGTATTATGGATTTAGTGAAATGTGATGGGGCAGCACTTTACTACAAAGGGAAGTGTTATCTACTAGGAGTGACCCCAACCGAAGCCCAAATAAAAGATATCGCAAATTGGTTGTTGGCTTTTCATGGCGATTCGACTGGGCTAAGTACCGACAGCTTAGCCCAGGCCGGCTACCCCGGAGCAGCATTGCTCGGCAATGCGGTATGTGGAATGGCTGTTGCTTATATCACTAAACGGGATTTTCTCTTCTGGTTTCGATCTCACACAGCCAAAGAGATCAAGTGGGGTGGAGCAAAGCATCATCCCGAGGACAAAGACGACGGTCAGAGAATGCATCCACGCTCTTCGTTCAACGCCTTTCTAGAAGTCGTAAAAAGCCGGAGTTTGCCTTGGGAGAATGCAGAGATGGATGCTATTCATTCTTTGCGGCTTATTCTGCGAGACTCGTTCAAAGACTCCGAATTCAACAACTCTAAGGCAGTTATAGATGCCCTCCCCAAGGATCTCGAAATGCAAAGGTTGGATGAACTCAGTTCGGTTGCAAGAGAAATGGTTAGGTTGATAGAAACCGCTACTGCCCCCATTTTCGCCGTAGATGTCGATGGTCGAATAAATGGATGGAACACTAAGGTTGCTGAGTTGACCGGCTTTCCAGTGGAAGAGGCTATGGGGAAATCCTTGGTCCAAGATCTCGTATATAAGGAATCGGAAGAAACCGTCGAGAAACTTCTTCAACGAGCTTTGAGAGGCGAAGAAGACAAGAATGTAGAGATAAAATTGAAGATGTTTGGCTCAGAACAACATAAACGGCCCATTTTTGTAGTCGTCAATGCGTGCTCTAGCCGGGATTGCACGGACAATATCGTCGGAGTTTGTTTTGTCGGTCAGGATGTTACCGACCAAAAAGTTGTTATGGATAAGTTCATTAACATACAAGGAGATTACAAGTCTATAATTCACAGTCCGAACCCTTTGATCCCTCCCATATTCGCATCGGACGACAACACATACTGCTCAGAGTGGAATACTGCCATGGAAAACCTCACCGGTTGGTCAAAAGGGGAAATCATCGGAAAAATGTTGGTTGGAGAGGTCTTTGGCGGTTGTTGTCGGCTCAAGGGTTCGGATGGATTGACGAAATTTATGATTGTCTTACACAACGCCATTGGAGGAAACGATAGTGACAAATTTCCGTTTTCGTTTTTTGACCGGAACGGGAAATACGTGCAGGCCCTTTTAACGGCAAACAAGAGGGTCGATATGGAGGGCAATATCATTGGAGCTTTCTGCTTCTTACAGATAGCCAGTCCTGAATTACAGCAAGCGCTTAAAGTCCAGAGGTTGCAGGAGAAGAGATGTGTGGCAAGGATGAAGGAGCTTGCCTACATTTGTCAAGAAGTCAAAAATCCTTTTAATGGAATTCGATTTACTCACTCGCTTTTGGAAGCGACAGAATTGACCGACGATCAAAAGCAGTTTTTGGAGATAAGCACCGCGTGCGAGAAGCAGATGTCGAAGATTATGAAAGATGTGGATTTGGAAAGCATCGAAGACGGTACGTTGGAGCTTGAGAAGTCGGAGTTCGTGCTCGGGAGTGTCATTAACGCCGTTGTTGGCCAAGTAATGATAGCAGTTAGAGAAAGAAACTTGCAGCTAATTCGAGATATCCCAGAAGAAGTAAAAAGTCTCACAGTTTATGGCGATCAATTCAGAATTCAACAAGTTCTGACCGATTTTCTGTTGAATATGGTGCGATATGCGTCATCGCCGGATGGTTGGGTTGAGATTCAAGTCTGTCCGAGCTTGAAGCAAATCTCGGAGGGACTCACACTTGTGCATAATGAATTCAGGATTTTGTGCTCCGGCGAAGGACTTCCGCCAGAATTGGTTCAAGACATGTTTCATAGCAGTCGACGGGTGACTCGAGAAGGCCTCGGATTGAGCATGTGTCGCAAGATTTTGAAGCTCATGAATGGGCAAGTCCAGTACATCAGAGAGTCGGAAAACTGTTGCTTCCTAATTATTTTTGAGCTTCCTATGACTTGA 5382 45.88 MATGQLFSRTTQALFYNYKQLPIQRMLDFDFLCGVETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPESDTKQLIAYARANNKVVLGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNEALREAGAIVPTSYEALESAIRETFEKLAEQGNITPVKEFTPPQIPEDLSSAIKSGKVRAPTHIISTISDDRGMLYHPFSLLEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTHFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLTPYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQRFARTHFPSVKYMEYAVEVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGLFSKQEIDEIVEIGYLNGLFVLARAIGLIGHTFDQKRLKQPLYRHPWEDVLYAKNGRTGLVGQWQVLKFDANNQELCSSAFSPHRDRGQLSQLNRISICERLSESGEIMASGSNAAQSEHQQGQSSNANTSNTVVLRSESVSKAIAQYTVDARLHAVFEQSGKSGKSFDYSQSVKTSTQSVPEQQITGYLSKIQRGGRIQPFGCMMAVEEASFQVIAYSFNAQEMLGLTPQSVPNLEKPEILTIGTDVRSLFTQSSVLLLERAFRSREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVDCVRELTGYDRVMVFKFHEDEHGEVVAESKKSNLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHSTPVRVIQDEGLVQPLCLVGSTLRAPHGCHAQYMANMGSVASLAMAVIINGTDNETGGGRNSMRLWGLVVCHHNSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLKTQTLLCDMILRDSPAGIVTQSPSIMDLVKCDGAALYYKGKCYLLGVTPTEAQIKDIANWLLAFHGDSTGLSTDSLAQAGYPGAALLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSLPWENAEMDAIHSLRLILRDSFKDSEFNNSKAVIDALPKDLEMQRLDELSSVAREMVRLIETATAPIFAVDVDGRINGWNTKVAELTGFPVEEAMGKSLVQDLVYKESEETVEKLLQRALRGEEDKNVEIKLKMFGSEQHKRPIFVVVNACSSRDCTDNIVGVCFVGQDVTDQKVVMDKFINIQGDYKSIIHSPNPLIPPIFASDDNTYCSEWNTAMENLTGWSKGEIIGKMLVGEVFGGCCRLKGSDGLTKFMIVLHNAIGGNDSDKFPFSFFDRNGKYVQALLTANKRVDMEGNIIGAFCFLQIASPELQQALKVQRLQEKRCVARMKELAYICQEVKNPFNGIRFTHSLLEATELTDDQKQFLEISTACEKQMSKIMKDVDLESIEDGTLELEKSEFVLGSVINAVVGQVMIAVRERNLQLIRDIPEEVKSLTVYGDQFRIQQVLTDFLLNMVRYASSPDGWVEIQVCPSLKQISEGLTLVHNEFRILCSGEGLPPELVQDMFHSSRRVTREGLGLSMCRKILKLMNGQVQYIRESENCCFLIIFELPMT 1793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1906954 1919183 - BLOR18076 Blo07g00144 62668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00144 1793 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 136 IPR036291 -
Blo07g00144 1793 Pfam His Kinase A (phospho-acceptor) domain 1571 1631 IPR003661 GO:0000155|GO:0007165
Blo07g00144 1793 SMART HKATPase_4 1679 1792 IPR003594 -
Blo07g00144 1793 SUPERFAMILY PYP-like sensor domain (PAS domain) 755 869 IPR035965 -
Blo07g00144 1793 ProSiteProfiles PAS repeat profile. 1292 1363 IPR000014 -
Blo07g00144 1793 TIGRFAM sensory_box: PAS domain S-box protein 1299 1414 IPR000014 -
Blo07g00144 1793 Gene3D PAS domain 1283 1420 - -
Blo07g00144 1793 SMART gaf_1 899 1087 IPR003018 GO:0005515
Blo07g00144 1793 SUPERFAMILY GAF domain-like 1085 1262 - -
Blo07g00144 1793 CDD HisKA 1567 1623 IPR003661 GO:0000155|GO:0007165
Blo07g00144 1793 Pfam Citrate synthase, C-terminal domain 398 606 IPR002020 GO:0046912
Blo07g00144 1793 Pfam Phytochrome region 1090 1264 IPR013515 GO:0006355|GO:0009584
Blo07g00144 1793 CDD PAS 1437 1545 IPR000014 -
Blo07g00144 1793 Gene3D - 1082 1255 IPR043150 -
Blo07g00144 1793 SUPERFAMILY GAF domain-like 879 1074 - -
Blo07g00144 1793 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 259 275 IPR017440 -
Blo07g00144 1793 ProSiteProfiles PAS repeat profile. 1426 1478 IPR000014 -
Blo07g00144 1793 PANTHER TWO-COMPONENT HISTIDINE KINASE 679 1792 - -
Blo07g00144 1793 SUPERFAMILY PYP-like sensor domain (PAS domain) 1440 1543 IPR035965 -
Blo07g00144 1793 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 899 1067 IPR016132 -
Blo07g00144 1793 SUPERFAMILY Citrate synthase 130 612 IPR036969 GO:0046912
Blo07g00144 1793 Gene3D - 138 323 IPR016102 -
Blo07g00144 1793 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 3. 168 193 IPR017866 -
Blo07g00144 1793 Gene3D PAS domain 1439 1551 - -
Blo07g00144 1793 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1679 1791 IPR003594 -
Blo07g00144 1793 ProSitePatterns Phytochrome chromophore attachment site signature. 999 1008 IPR013516 -
Blo07g00144 1793 Gene3D Citrate Synthase, domain 1 408 606 IPR016142 -
Blo07g00144 1793 Pfam CoA-ligase 174 298 IPR005811 GO:0003824
Blo07g00144 1793 PRINTS Phytochrome signature 1107 1127 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 999 1020 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1408 1428 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 814 836 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 914 933 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1295 1311 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1192 1211 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1314 1329 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1388 1405 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 PRINTS Phytochrome signature 1225 1243 IPR001294 GO:0006355|GO:0009584
Blo07g00144 1793 MobiDBLite consensus disorder prediction 671 693 - -
Blo07g00144 1793 CDD CCL_ACL-C 377 614 - -
Blo07g00144 1793 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1642 1788 IPR036890 -
Blo07g00144 1793 Pfam GAF domain 900 1077 IPR003018 GO:0005515
Blo07g00144 1793 CDD PAS 1303 1410 IPR000014 -
Blo07g00144 1793 Gene3D PAS domain 754 1002 - -
Blo07g00144 1793 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 174 203 IPR033847 -
Blo07g00144 1793 Pfam PAS fold 1295 1410 IPR013767 GO:0006355
Blo07g00144 1793 Pfam PAS fold 1426 1545 IPR013767 GO:0006355
Blo07g00144 1793 Gene3D - 2 137 - -
Blo07g00144 1793 Coils Coil 1345 1365 - -
Blo07g00144 1793 Gene3D - 459 570 IPR016143 -
Blo07g00144 1793 SMART HisKA_10 1567 1631 IPR003661 GO:0000155|GO:0007165
Blo07g00144 1793 Gene3D - 880 1238 IPR029016 -
Blo07g00144 1793 CDD HATPase_Phy-like 1678 1790 IPR044767 -
Blo07g00144 1793 Pfam PAS fold 751 866 IPR013654 GO:0006355
Blo07g00144 1793 PANTHER PHYTOCHROME 679 1792 - -
Blo07g00144 1793 Gene3D - 1607 1785 IPR036890 -
Blo07g00144 1793 SUPERFAMILY PYP-like sensor domain (PAS domain) 1297 1406 IPR035965 -
Blo07g00144 1793 ProSiteProfiles Histidine kinase domain profile. 1574 1793 IPR005467 -
Blo07g00144 1793 SMART pas_2 1294 1361 IPR000014 -
Blo07g00144 1793 SMART pas_2 1425 1495 IPR000014 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00030 Blo07g00144 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00029 Blo-Chr1:388292 Blo07g00144 Blo-Chr7:1906954 0 dispersed
Blo01g00030 Blo-Chr1:401409 Blo07g00144 Blo-Chr7:1906954 0 dispersed
Blo01g00879 Blo-Chr1:17349254 Blo07g00144 Blo-Chr7:1906954 0 dispersed
Blo07g00144 Blo-Chr7:1906954 Blo18g00692 Blo-Chr18:15174709 0 dispersed
Blo07g00144 Blo-Chr7:1906954 Blo02g00140 Blo-Chr2:1219131 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00144 K12121 - zju:107418995 1912.12