Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00171 ATGGAAGGCTTCAACTCCGGGGCCTTCTCTGATATTGTGGTTCACGCAGCAGGCTCCACCTACCATCTCCATCGCTTAATTCTATCTCGTAGCTCCTACTTCCGGAACATGCTTCATGGGCCTTGGAAAGAAGCTACTTCTCCTGTAGTAACCTTGCATGTGGATGATAAGAATGTTAACGGGGAGGCAATTGCAATGGCCTTGGCTTATATGTACGGACATCAACCTAAGCTTACAGACAATAATGCATTTCGAGTTCTGGCTGCTGCTTCCTTTCTTGACCTTCAGGACTTATGTGGAACATGTACGGACTTCATTATAGCTGAATTGTGGACTTCAAATTTTTTAGAATATCAGGTTTTTGCCGAGAACCAAGATTATGGCATACATGGAGACCGTGTGAGAAATGCTTGTTGGGGTTATCTTTGTCAAAGCGGTGCCATAGAATTGAAAGAGGTGCTTCCAAAACTTTCATCTCAAACTTTGCATGTCTTGCTGACATCAGATGAATTGTGGGTATCTAGTGAAGAAAAAAGGTTTGAATTGGCACTTTATACATTCCTTATTAAAGGGTCTCTTTCCAAGTCAGAAATTTCTGAACAAGGACGGTGTAGTTTCGAGTCAGGATCTGAAGCTCTTTCTGAAACTTCTAAGGCAAAAGATATATTTTTAATCGATAGCTGCAATAACATGGGGTTGGAGTCTGAACTGGGACATTTAAGTTTGAAGGATAGCTTCAGTCTTTGTAATACTGCTCAAAATCTTGTGGTTGAGCTCCCAGGGTGTGCGATTAACTCTCAAAAAGGGATCTCCAATTCTAAACAACAGATGCAACAACCAGCTTACCCTCCACCAAATTTGGATCCCAAATATGTATGCAACATGGAAGGGTCATCATCATTGAATAGTTCTTACTCTGATAACAATGGAGTAAGGACGTCATGTTCTTCAGTAGACATGGCTGATGGTGTTGGAGTAAGTGGACCGGGGGCCAACGGGGTCGCTGTGGAAGGGCCATCTGATGAAGGCTCATGTTATGAGTTGGATAACAATTCTTGGCTTTCTGGGGTACAACCTGGGCATTTTTCTGTGGGGAACTCTTCTAGTAATGGACAAAGACAGAATGATTGGGGAAGTTGTGGTTTGCATGCTCTTTCATGGGGTGGCAGGGTTGTAGGAAGAAGGCAACTTAAAAGTCATGCTAAAGGGAGCTTTGGTGTTCGTTCCGAGGAGTATGAAACATTTGATAATATATTTGAAGGGGGTTCCCTTTTATATTGTAGCATGTCTTTTGAAGCCCTTCTGAATGTTAGAAAGCAACTTGAGGAATTGGGTTTTCCGTGCAAAGCTGTAAATGATGGGTTGTGGCTGCAGATGCTTTTAAGTCAAAGGGTGCAAGAAATTGGTTCTGATACATGCAAAAATTGTTGCCTCACAAGCATGATGTGCGCTTGCAGACTGCCTTATGGCTTTTCTCGTGGAGTTGAATCCTCAGGATACTATGTAAATGAGAATGGCCAGAACAATTCTGGCAACTTGGGAAATATATATGTTACTGATTCTGTGCCAGGTGAAACTAATGGCCTTTTCAGACCTGTGCGAGTGCATGTTAGGGGACCTGTTGAAGGACTAGCAGGAATTGGACGTGGAACAACATTTGTGCCAGCAAGTGCTTGGCCTCCAACACGGTTTGTTTTTTCTCGTGTGCCATTTGGTATGGGCAACAGAAATTCTCAGCCGTCTCTTGCTAATGATGATTCAGATACAAGAACGGATCTCAATGGCGAGTTATCTGGTGATGGTTTGACTGCTTTAGTTGGGCTAAGCCAAGGAGGGACTAGTTCAGCTGCTGTCCAGGGAGAGCAAACGGAAAGAGGATATGAGATTGATAATCAAAGCAGAGTACTTGGAGCCTCCGTGGCTGGACCAAGTACCTCTGGTATTCCTGTGCAGATACAACAGTCACCAGAGCATGCCCTTGGAATTGAATGGGAAAGCGGGAGCAGTTCTATATCTCTGGATGTGAGAACGCCTTTGAGCCACTTTCCTCCTTTTCGCTTTGGAGTGCAATTTGAGTATGTGCACAGGCTTGGTGATGGCCAAGTCAAGCACTCACCTGAATTTTTTTATGCTGGCTCTTTATGGAAGATTAGTGTTCAGGCTTTTGGTGATGAAGATCCTCAAGGAAGACGAACTCTTGGCTTATTTCTTCACAGACGAAAAGGAGAGGCAATCGATCCTCATAGAAAGGTAAATTTCGGTCTGGATTACCCATCATGCTTGATCCTATGGGTAATGTATGTCGATTCCCGTGAAAAGGTTACGGCTCGATATCAGAATCTTCGATTCTCTAGCGATCTTCGACTGAAATTTGGCGTGCTGTTGAACGGCTCAAAAGGAACAAAGAAGAAGATCAGGTCTCGGCAGAATCGCCTTGAAAGTTTAGGAATGGGGGAGAGTGAGAAGCGAGTGATGGTGATCGGTGTCGACGAGAGTGAACATAGCTTTTACGCTTTGCAGTGGACACTTGAACATTTCTTCGCTTCTCATTTCCAATCTTTGTTCAAACTTGTCGTCATCCACGCAAAAACAGCTCCATCTTCAGTTCTCGGAGTCGCTGGGCCAGGTTCCGTGAATGTTTTACCAATCCTTGATGCCGATTTGAAGAAAACAGCAGCCAGAACCATTAACAAAGCTAAGGAGAAGTGCAAAAGTAACATGGGTCTTATTCTCATCCACTTCGCCTGTTTTATTAGTCAATTTAGTATTTTATTTTGCTTTTGTAGTTAA 2790 43.55 MEGFNSGAFSDIVVHAAGSTYHLHRLILSRSSYFRNMLHGPWKEATSPVVTLHVDDKNVNGEAIAMALAYMYGHQPKLTDNNAFRVLAAASFLDLQDLCGTCTDFIIAELWTSNFLEYQVFAENQDYGIHGDRVRNACWGYLCQSGAIELKEVLPKLSSQTLHVLLTSDELWVSSEEKRFELALYTFLIKGSLSKSEISEQGRCSFESGSEALSETSKAKDIFLIDSCNNMGLESELGHLSLKDSFSLCNTAQNLVVELPGCAINSQKGISNSKQQMQQPAYPPPNLDPKYVCNMEGSSSLNSSYSDNNGVRTSCSSVDMADGVGVSGPGANGVAVEGPSDEGSCYELDNNSWLSGVQPGHFSVGNSSSNGQRQNDWGSCGLHALSWGGRVVGRRQLKSHAKGSFGVRSEEYETFDNIFEGGSLLYCSMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIGSDTCKNCCLTSMMCACRLPYGFSRGVESSGYYVNENGQNNSGNLGNIYVTDSVPGETNGLFRPVRVHVRGPVEGLAGIGRGTTFVPASAWPPTRFVFSRVPFGMGNRNSQPSLANDDSDTRTDLNGELSGDGLTALVGLSQGGTSSAAVQGEQTERGYEIDNQSRVLGASVAGPSTSGIPVQIQQSPEHALGIEWESGSSSISLDVRTPLSHFPPFRFGVQFEYVHRLGDGQVKHSPEFFYAGSLWKISVQAFGDEDPQGRRTLGLFLHRRKGEAIDPHRKVNFGLDYPSCLILWVMYVDSREKVTARYQNLRFSSDLRLKFGVLLNGSKGTKKKIRSRQNRLESLGMGESEKRVMVIGVDESEHSFYALQWTLEHFFASHFQSLFKLVVIHAKTAPSSVLGVAGPGSVNVLPILDADLKKTAARTINKAKEKCKSNMGLILIHFACFISQFSILFCFCS 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2180663 2188183 - BLOR18103 Blo07g00171 62695

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00171 929 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 1 779 - -
Blo07g00171 929 Pfam BTB/POZ domain 4 108 IPR000210 GO:0005515
Blo07g00171 929 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 1 779 - -
Blo07g00171 929 SUPERFAMILY POZ domain 4 107 IPR011333 -
Blo07g00171 929 CDD USP_Like 823 868 - -
Blo07g00171 929 Gene3D Potassium Channel Kv1.1; Chain A 2 128 IPR011333 -
Blo07g00171 929 MobiDBLite consensus disorder prediction 575 598 - -
Blo07g00171 929 ProSiteProfiles BTB domain profile. 10 80 IPR000210 GO:0005515
Blo07g00171 929 SMART BTB_4 10 110 IPR000210 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00171 - - - qsu:111988508 1136.32
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00307 Blo-Chr5:3460182 Blo07g00171 Blo-Chr7:2180663 1.12E-28 dispersed
Blo06g00488 Blo-Chr6:26495778 Blo07g00171 Blo-Chr7:2180663 2.92E-28 dispersed
Blo02g00504 Blo-Chr2:7970199 Blo07g00171 Blo-Chr7:2180663 1.24E-43 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g300 . . . . . . . . . . Cma06g01502 . Car06g01293 . . . . . . . . . . . . . . . . . . . . . . Lsi05g01544 . . Cme06g00736 . Blo07g00171 Bda11g00523 . . Bpe13g00667 . . . Cmo06g01500 . . . . . . . . . . . . . . Cla05g00656 Cam05g0717 Cec05g0728 Cco05g0727 Clacu05g0712 Cmu05g0677 Cre05g0751 . Csa03g01470 Chy06g00708 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 31
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12577 PF00651 BTB 2.00E-14 CL0033 Blo TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00171 Blo_Chr07 FPKM 16.569038 13.792214 13.219095 8.84117 12.670116 7.870555 9.840595 9.59915 8.717976 9.244025