Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00181 ATGGGCGCAGCCCCAGAAAGGAGGCTTCCGGGAAGCCTCGCAACAGTGCTCCGGGCACACTTGGCAGATAGGCTGTGCGGCAGTGATGTGCTCCAGGGTCCTATCACTCGGAGTCGGGCCAAGAAACTTATTGCTTATCTAACGAACTTTTATTTTGTAGGAACTACCAAGATGTGGGATTCTTTGAAGGAGATTTCCATTAAGGTTTCCAAGCGTCTCTTGGAACCTGTCAGGCAGGCAGAGGCAGTAGGCGCAGAGAGCAGCGGCGCGCTGGGCGCGCCCCAGGCAGACACAGGCATCGGCAAGCCGCGCGCCGCGCGCACTGCAGAGAAGACGTCGGCATGCGTTCGGACAGGGTCGCGAGAAATGCGAGACACGTCAGCAATTCAGACAAGGCTCCGAGAAACACGGGCCACGGTGGCACGGACAGGGGCGGCGCACATTCCAGGAAGTTTGGAGTTGTCTGAAAGCCTCTCTGGGAGGAAGCTGAAGTGGGAAACCGAAATACTGTATCATCAGTCACCTATCTGTTGGCTTGCTTACTCCCGAGTCAGTGTAATGGAACGTTACGGTGGGGATACGGAGAATTCGCCTTCGGATCTGCAGCCTGAATGGACCTCTCAGAAATCCGAGACCGGGCTAGAGGAGCCTCTATGGCGGTTGGGACTGGGAGGAGAGGAGTCTTACCCAGAGCGACCTGATGAGGCCAACTGTATCTATTACATGCGTACGGGGGTTTGTGGGTACGGTTCGCGTTGCCGGTTCAATCATCCCCCTCGCAATGGGGTAATTTCTGGATCTGCAAGACATGAGAGAGGGAAGTACCCAAAGCGATTAGGCCAACCCGAATGCCAGTATTACATGAGGACTGGGATGTGTAAATTTGGATTGTCTTGTAAATATCACCATCCGACCCAGGGAGGTGGTTCTGTTGGCTACGTTTCGGTCTTACTAAATTACTACGGATACCCATTACGGCCGGGCGAAAGGGAATGTTCCTTTTATGCCAAAACGGGTTCGTGCAGTTTTGGTTCCACATGCAAATTCCATCACCCACAGCCTGTTGGCATGCAGCCTCCAGCCCCATCACCGGCTATGTATCCTCAAATGCAGTCTCCATCTGTCCCTTCTTCACAACAGTATGGAGTAGTAGTAGCTGGAAGGCCATCTTTGCTTCCTAGCTCGTATATCCATAGCCCTTATGGCCCTGTAATGATTTCTCCGAGCATTGTCCCATTTCTGAGCTGGAGTCATTATCCGACATCTATGAGCCAAGTTGCGCCTCCATCTCCTAGCACTCAACCTATAATTGATTCAGGAACACTATTTGGTGTAACACAACTTACTCCTCCACCTGCATATACTGGAGCGTACCAACCGATGCTTTCTTCTTCTGGTCCATCACTTGGTAACCAGTTATTTCCCGACAGACCTGGTCAATCAGATTGTCAGTATTACTTGAGAACAGGCAATTGTAAATATGGATCTTCTTGTAAATACCATCATCCGCCGGAATTAGTTGCTCTTAAAACAGATGTTTTTCACAGCTCTTCAGGTCTTCCTCTTCGTCCGAATCAAGTATTTTTCAGGGTGCAGCACTTTGTACTCACTTTCTACAAAATGGGTTCTGTAAGTTTGGCTCAGCCTGTAAATTTGACCATTCCTTGGAAACACTTGATGGAAGCCCCCATTGGTTGTCTCTTTCTGACCTCGCAATCATGTTCCCCGTCCGGGACCGTCGAGTTTAACGCCTCGGTTTCGTCTCTGTCAAGCACTGTCGAATGGAGACAAAAGACGTCAAGTATTGTCCCTCCTGGTAGTTCAAAGAAGAAGGACGATGGCGAAGACGAAGCTCATTGGCCGTTGGATAGCGGAATGGATGGCCAGGACTGA 1893 50.77 MGAAPERRLPGSLATVLRAHLADRLCGSDVLQGPITRSRAKKLIAYLTNFYFVGTTKMWDSLKEISIKVSKRLLEPVRQAEAVGAESSGALGAPQADTGIGKPRAARTAEKTSACVRTGSREMRDTSAIQTRLRETRATVARTGAAHIPGSLELSESLSGRKLKWETEILYHQSPICWLAYSRVSVMERYGGDTENSPSDLQPEWTSQKSETGLEEPLWRLGLGGEESYPERPDEANCIYYMRTGVCGYGSRCRFNHPPRNGVISGSARHERGKYPKRLGQPECQYYMRTGMCKFGLSCKYHHPTQGGGSVGYVSVLLNYYGYPLRPGERECSFYAKTGSCSFGSTCKFHHPQPVGMQPPAPSPAMYPQMQSPSVPSSQQYGVVVAGRPSLLPSSYIHSPYGPVMISPSIVPFLSWSHYPTSMSQVAPPSPSTQPIIDSGTLFGVTQLTPPPAYTGAYQPMLSSSGPSLGNQLFPDRPGQSDCQYYLRTGNCKYGSSCKYHHPPELVALKTDVFHSSSGLPLRPNQVFFRVQHFVLTFYKMGSVSLAQPVNLTIPWKHLMEAPIGCLFLTSQSCSPSGTVEFNASVSSLSSTVEWRQKTSSIVPPGSSKKKDDGEDEAHWPLDSGMDGQD 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2281253 2290216 + BLOR18113 Blo07g00181 62705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00181 630 SUPERFAMILY CCCH zinc finger 234 259 IPR036855 GO:0046872
Blo07g00181 630 SUPERFAMILY CCCH zinc finger 282 305 IPR036855 GO:0046872
Blo07g00181 630 SUPERFAMILY CCCH zinc finger 329 353 IPR036855 GO:0046872
Blo07g00181 630 MobiDBLite consensus disorder prediction 195 212 - -
Blo07g00181 630 PANTHER PROTEIN PHOSPHATASE RELATED 200 590 - -
Blo07g00181 630 SUPERFAMILY CCCH zinc finger 481 504 IPR036855 GO:0046872
Blo07g00181 630 MobiDBLite consensus disorder prediction 113 128 - -
Blo07g00181 630 ProSiteProfiles Zinc finger C3H1-type profile. 477 505 IPR000571 GO:0046872
Blo07g00181 630 ProSiteProfiles Zinc finger C3H1-type profile. 326 354 IPR000571 GO:0046872
Blo07g00181 630 MobiDBLite consensus disorder prediction 191 212 - -
Blo07g00181 630 MobiDBLite consensus disorder prediction 84 128 - -
Blo07g00181 630 MobiDBLite consensus disorder prediction 597 630 - -
Blo07g00181 630 ProSiteProfiles Zinc finger C3H1-type profile. 278 306 IPR000571 GO:0046872
Blo07g00181 630 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 479 504 IPR000571 GO:0046872
Blo07g00181 630 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 234 259 IPR000571 GO:0046872
Blo07g00181 630 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 280 304 IPR000571 GO:0046872
Blo07g00181 630 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 328 353 IPR000571 GO:0046872
Blo07g00181 630 Gene3D - 475 579 - -
Blo07g00181 630 Gene3D - 230 308 - -
Blo07g00181 630 ProSiteProfiles Zinc finger C3H1-type profile. 232 260 IPR000571 GO:0046872
Blo07g00181 630 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 200 590 - -
Blo07g00181 630 MobiDBLite consensus disorder prediction 608 623 - -
Blo07g00181 630 Gene3D - 309 362 - -
Blo07g00181 630 SMART c3hfinal6 232 259 IPR000571 GO:0046872
Blo07g00181 630 SMART c3hfinal6 278 305 IPR000571 GO:0046872
Blo07g00181 630 SMART c3hfinal6 326 353 IPR000571 GO:0046872
Blo07g00181 630 SMART c3hfinal6 477 504 IPR000571 GO:0046872
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00181 Blo12g00022 CCT
Blo07g00181 Blo12g00022 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00181 Blo-Chr7:2281253 Blo12g00022 Blo-Chr12:1544529 3.33E-124 dispersed
Blo09g00223 Blo-Chr9:10063263 Blo07g00181 Blo-Chr7:2281253 5.14E-23 dispersed
Blo06g00314 Blo-Chr6:18140309 Blo07g00181 Blo-Chr7:2281253 2.88E-13 transposed
Blo01g00086 Blo-Chr1:1154513 Blo07g00181 Blo-Chr7:2281253 2.53E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12579 PF00642 zf-CCCH 1.50E-09 CL0537 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00181 - - jre:108995077 439.884