Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo07g00181 | ATGGGCGCAGCCCCAGAAAGGAGGCTTCCGGGAAGCCTCGCAACAGTGCTCCGGGCACACTTGGCAGATAGGCTGTGCGGCAGTGATGTGCTCCAGGGTCCTATCACTCGGAGTCGGGCCAAGAAACTTATTGCTTATCTAACGAACTTTTATTTTGTAGGAACTACCAAGATGTGGGATTCTTTGAAGGAGATTTCCATTAAGGTTTCCAAGCGTCTCTTGGAACCTGTCAGGCAGGCAGAGGCAGTAGGCGCAGAGAGCAGCGGCGCGCTGGGCGCGCCCCAGGCAGACACAGGCATCGGCAAGCCGCGCGCCGCGCGCACTGCAGAGAAGACGTCGGCATGCGTTCGGACAGGGTCGCGAGAAATGCGAGACACGTCAGCAATTCAGACAAGGCTCCGAGAAACACGGGCCACGGTGGCACGGACAGGGGCGGCGCACATTCCAGGAAGTTTGGAGTTGTCTGAAAGCCTCTCTGGGAGGAAGCTGAAGTGGGAAACCGAAATACTGTATCATCAGTCACCTATCTGTTGGCTTGCTTACTCCCGAGTCAGTGTAATGGAACGTTACGGTGGGGATACGGAGAATTCGCCTTCGGATCTGCAGCCTGAATGGACCTCTCAGAAATCCGAGACCGGGCTAGAGGAGCCTCTATGGCGGTTGGGACTGGGAGGAGAGGAGTCTTACCCAGAGCGACCTGATGAGGCCAACTGTATCTATTACATGCGTACGGGGGTTTGTGGGTACGGTTCGCGTTGCCGGTTCAATCATCCCCCTCGCAATGGGGTAATTTCTGGATCTGCAAGACATGAGAGAGGGAAGTACCCAAAGCGATTAGGCCAACCCGAATGCCAGTATTACATGAGGACTGGGATGTGTAAATTTGGATTGTCTTGTAAATATCACCATCCGACCCAGGGAGGTGGTTCTGTTGGCTACGTTTCGGTCTTACTAAATTACTACGGATACCCATTACGGCCGGGCGAAAGGGAATGTTCCTTTTATGCCAAAACGGGTTCGTGCAGTTTTGGTTCCACATGCAAATTCCATCACCCACAGCCTGTTGGCATGCAGCCTCCAGCCCCATCACCGGCTATGTATCCTCAAATGCAGTCTCCATCTGTCCCTTCTTCACAACAGTATGGAGTAGTAGTAGCTGGAAGGCCATCTTTGCTTCCTAGCTCGTATATCCATAGCCCTTATGGCCCTGTAATGATTTCTCCGAGCATTGTCCCATTTCTGAGCTGGAGTCATTATCCGACATCTATGAGCCAAGTTGCGCCTCCATCTCCTAGCACTCAACCTATAATTGATTCAGGAACACTATTTGGTGTAACACAACTTACTCCTCCACCTGCATATACTGGAGCGTACCAACCGATGCTTTCTTCTTCTGGTCCATCACTTGGTAACCAGTTATTTCCCGACAGACCTGGTCAATCAGATTGTCAGTATTACTTGAGAACAGGCAATTGTAAATATGGATCTTCTTGTAAATACCATCATCCGCCGGAATTAGTTGCTCTTAAAACAGATGTTTTTCACAGCTCTTCAGGTCTTCCTCTTCGTCCGAATCAAGTATTTTTCAGGGTGCAGCACTTTGTACTCACTTTCTACAAAATGGGTTCTGTAAGTTTGGCTCAGCCTGTAAATTTGACCATTCCTTGGAAACACTTGATGGAAGCCCCCATTGGTTGTCTCTTTCTGACCTCGCAATCATGTTCCCCGTCCGGGACCGTCGAGTTTAACGCCTCGGTTTCGTCTCTGTCAAGCACTGTCGAATGGAGACAAAAGACGTCAAGTATTGTCCCTCCTGGTAGTTCAAAGAAGAAGGACGATGGCGAAGACGAAGCTCATTGGCCGTTGGATAGCGGAATGGATGGCCAGGACTGA | 1893 | 50.77 | MGAAPERRLPGSLATVLRAHLADRLCGSDVLQGPITRSRAKKLIAYLTNFYFVGTTKMWDSLKEISIKVSKRLLEPVRQAEAVGAESSGALGAPQADTGIGKPRAARTAEKTSACVRTGSREMRDTSAIQTRLRETRATVARTGAAHIPGSLELSESLSGRKLKWETEILYHQSPICWLAYSRVSVMERYGGDTENSPSDLQPEWTSQKSETGLEEPLWRLGLGGEESYPERPDEANCIYYMRTGVCGYGSRCRFNHPPRNGVISGSARHERGKYPKRLGQPECQYYMRTGMCKFGLSCKYHHPTQGGGSVGYVSVLLNYYGYPLRPGERECSFYAKTGSCSFGSTCKFHHPQPVGMQPPAPSPAMYPQMQSPSVPSSQQYGVVVAGRPSLLPSSYIHSPYGPVMISPSIVPFLSWSHYPTSMSQVAPPSPSTQPIIDSGTLFGVTQLTPPPAYTGAYQPMLSSSGPSLGNQLFPDRPGQSDCQYYLRTGNCKYGSSCKYHHPPELVALKTDVFHSSSGLPLRPNQVFFRVQHFVLTFYKMGSVSLAQPVNLTIPWKHLMEAPIGCLFLTSQSCSPSGTVEFNASVSSLSSTVEWRQKTSSIVPPGSSKKKDDGEDEAHWPLDSGMDGQD | 630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2281253 | 2290216 | + | BLOR18113 | Blo07g00181 | 62705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo07g00181 | 630 | SUPERFAMILY | CCCH zinc finger | 234 | 259 | IPR036855 | GO:0046872 | |
Blo07g00181 | 630 | SUPERFAMILY | CCCH zinc finger | 282 | 305 | IPR036855 | GO:0046872 | |
Blo07g00181 | 630 | SUPERFAMILY | CCCH zinc finger | 329 | 353 | IPR036855 | GO:0046872 | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 195 | 212 | - | - | |
Blo07g00181 | 630 | PANTHER | PROTEIN PHOSPHATASE RELATED | 200 | 590 | - | - | |
Blo07g00181 | 630 | SUPERFAMILY | CCCH zinc finger | 481 | 504 | IPR036855 | GO:0046872 | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 113 | 128 | - | - | |
Blo07g00181 | 630 | ProSiteProfiles | Zinc finger C3H1-type profile. | 477 | 505 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | ProSiteProfiles | Zinc finger C3H1-type profile. | 326 | 354 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 191 | 212 | - | - | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 84 | 128 | - | - | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 597 | 630 | - | - | |
Blo07g00181 | 630 | ProSiteProfiles | Zinc finger C3H1-type profile. | 278 | 306 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 479 | 504 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 234 | 259 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 280 | 304 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 328 | 353 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | Gene3D | - | 475 | 579 | - | - | |
Blo07g00181 | 630 | Gene3D | - | 230 | 308 | - | - | |
Blo07g00181 | 630 | ProSiteProfiles | Zinc finger C3H1-type profile. | 232 | 260 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 | 200 | 590 | - | - | |
Blo07g00181 | 630 | MobiDBLite | consensus disorder prediction | 608 | 623 | - | - | |
Blo07g00181 | 630 | Gene3D | - | 309 | 362 | - | - | |
Blo07g00181 | 630 | SMART | c3hfinal6 | 232 | 259 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | SMART | c3hfinal6 | 278 | 305 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | SMART | c3hfinal6 | 326 | 353 | IPR000571 | GO:0046872 | |
Blo07g00181 | 630 | SMART | c3hfinal6 | 477 | 504 | IPR000571 | GO:0046872 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo07g00181 | Blo12g00022 | CCT | |
Blo07g00181 | Blo12g00022 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g00181 | Blo-Chr7:2281253 | Blo12g00022 | Blo-Chr12:1544529 | 3.33E-124 | dispersed | |
Blo09g00223 | Blo-Chr9:10063263 | Blo07g00181 | Blo-Chr7:2281253 | 5.14E-23 | dispersed | |
Blo06g00314 | Blo-Chr6:18140309 | Blo07g00181 | Blo-Chr7:2281253 | 2.88E-13 | transposed | |
Blo01g00086 | Blo-Chr1:1154513 | Blo07g00181 | Blo-Chr7:2281253 | 2.53E-20 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12579 | PF00642 | zf-CCCH | 1.50E-09 | CL0537 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo07g00181 | - | - | jre:108995077 | 439.884 |