Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00194 ATGTCGATGCAGAGAAAATTCTGGGTTGTAATGATGGTGATTGCAGTAGTTTTTCGTGCTGATTTGTTCGAGGTGGAAGGTCGGCCAAGGCGCATTCTTTTGGATTCCGACATCGATACTGATGATTTGTTTGCTCTTCTGTATCTCTTGAAACTCGACAGATCAAAATTCGAGCTGGAGGCAGTGACGATCAACACAAATGCTTGGACTAATGCCGGGCATGCGGTCAATCAACTTTACGACATTCTGTACATGATGGGCCGGGACGATATCGCGGTCGGAGTGGGCGGCGAAGGAGGAATTCGAGAAGACAGTGAAATTCTCGCAGATGTTGGTGGATTTCTTCCAATAATCGAACAGGGAATGACAACGGCCGGATATTGCCGATATCGACAAGCGATTCCTGCCGGAAGTGGAGGCCGGCTCGATATTGATACGAATTACGGCATTCGAAAAGCTTTCCTTCCACAGGGAAGAAGAAAATACACTCCCCTGCGACAACCGACGGCGCAGCAGGTGATGATCGAGAAAATCCGGGCCGGTCCGATAACCGTATTCATTATTGGAGCACATACAAATTTTGCTCTTTTCCTAATGAGTAATCCACATTTGAAGAAGAATGTGGAGCATATATACATAATGGGGGGTGGTGTTAGGTCGGAAAACCCAACCGGTTGTTGCCCGAAAAACGCTTCCTCGTCTTGCACGCCTCGACAATGCGGCAATCGTGGAAATTTGTTTACAGATTACACGAGTAATCCTTACGGAGAGTTCAATATTTTCGGAGACCCTTTTGCCGCGTATCAGGTGATTCATTCTGGGATTCCAATAACCATTGTTCCTCTTGATGCTACCAATACAATACCCATCACCGAGGCTTTTTTCGATGTATTTGATCGGAGTCAGCATACGTACGAGGCAAAATACTGCTTCCAATCGTTGAAAATCGCTAGAGATACTTGGTTTGACGATCAATTTTACACGAGCTATTTCATGTGGGACTCGTTTACCTCCGGCGTGGCGACGTCGATCATGCTGAATTCTCGCGATCGCGATGGAGAAAATGAATTTGCTGTGATGGAATACATGAACATAACTGTCGTCACTTCGAACAAACCTTACGGTGTATCCGACGGGTCGAATCCCTTTTTCGACGGCCGGAAGACTCCGAAGTTCGGCCTGAAAAACGGCGGCGTTCACAGCGGTCACGTTCAGACCGGTCTCCGGGATCCATTTTGTTTAGCTAAAAATGGAAAGGGGAAATGCATGGACGGTTACACGAAGGAAGTGACGGATCTGGACGGAGTCCGGGTTCTCGTCGCGACGGAGGCGAAGCCGAACGAGGACGGTGACAGCCTGCTGAACAGAGAATTCTTCAAAAGCTTTCTGGAGGTTCTTAATCGCCCTCAACAAGCTGGAAGATTCAATTTCACTACACAATTCCCCTCCTACACACAAGTTATGTACAAACCAAATTTCGGAAACAAAAAACTCGGAAAACCATTCGTGTTCGACATGGATATGAGCCCCGGAGATTTTCTCGCTCTTTTTTATCTGCTAAAAGTGCCCGTCGAGGTTATCGATCTCAAGGCAATTATAGTGAGTCCAACAGGTTGGGCGAATGCGGCAACCATTGATGTCGTTTACGATATTCTTCACATGATGGGTCGAGACGATATCTCGGTCGGTCTAGGCGATGTCTATGCAATGAACCAGTCGGATTCGGTCTTCTCCGCCGTCGGAGATTGCAAGTATGCCCAGTCCATTCCTCACGGAAGTGGCGGATTTTTGGACTCTGATACTCTCTATGGTCTTGCTCGTAATCTACCGCGAAGCCCCAGAAGGTATACTGCAGAAAACTCGGTCAAATTCGGAGCGCCTCGAGATACCGATCATCCCGAACTGAGACAAGCTCTAGCAATGGAAGTTTGGGAGTCCATATTCAATACAGTTGAACCAGGATCTAAGATTACAGTATTAACTAATGGACCATTGACTAATTTAGCAAAGCTTATTGTATCAAACAAGAATTACAGCTCTCTCATTCAGGAAGTGTTTATAGTCGGAGGACACACCAGGAATGTGGATGGAGAAAAAGGAAATGTATTTACCGTCCCCTCGAATAAATATGCCGAGTTCAACATGTTTCTTGACCCGTTGGCTGCGAAGACTGTCTTCGATTCGGAGTTGAATATCACCCTCATTCCGATTGGTTCGCAGCAAAGGGCGAGTTCGTTTACGAAGATCTTGGAAAGTTTCCGAGGAGCTAGGAAGACTCCCGAGCTTGTTTTTGCTCGTCGTTTGCTGTCCATGCTCTATCGCCTGCAAAAGACAAACACGAGATATCAGCATATGGAAATATTCTTGGGGGAGATACTCGGCTCGGTAGTTTCGACCGGTGACTCTTCGAATCTGAAGGCAACATTTAAAACAATGGCTCTCAAAATCTTGGCTAATGGGGTTGAATCCAAAGATGGAGAAATTTTGATTGATAACAGAGCAGGAAGAGAAATCAGAGTCTTAGAAAATGTGAACTTGTCAACTTACTCGGAGTTATACGCGAAGCAGCTAAGCGAGGAGAAGCAGTCGGCCATTGTTGGAAGCTTCAAAGTGCAAACCCGAATGTGGAGTAAGCTGCAAAAGCAAATTAATCCTGCAAATTAA 2664 46.21 MSMQRKFWVVMMVIAVVFRADLFEVEGRPRRILLDSDIDTDDLFALLYLLKLDRSKFELEAVTINTNAWTNAGHAVNQLYDILYMMGRDDIAVGVGGEGGIREDSEILADVGGFLPIIEQGMTTAGYCRYRQAIPAGSGGRLDIDTNYGIRKAFLPQGRRKYTPLRQPTAQQVMIEKIRAGPITVFIIGAHTNFALFLMSNPHLKKNVEHIYIMGGGVRSENPTGCCPKNASSSCTPRQCGNRGNLFTDYTSNPYGEFNIFGDPFAAYQVIHSGIPITIVPLDATNTIPITEAFFDVFDRSQHTYEAKYCFQSLKIARDTWFDDQFYTSYFMWDSFTSGVATSIMLNSRDRDGENEFAVMEYMNITVVTSNKPYGVSDGSNPFFDGRKTPKFGLKNGGVHSGHVQTGLRDPFCLAKNGKGKCMDGYTKEVTDLDGVRVLVATEAKPNEDGDSLLNREFFKSFLEVLNRPQQAGRFNFTTQFPSYTQVMYKPNFGNKKLGKPFVFDMDMSPGDFLALFYLLKVPVEVIDLKAIIVSPTGWANAATIDVVYDILHMMGRDDISVGLGDVYAMNQSDSVFSAVGDCKYAQSIPHGSGGFLDSDTLYGLARNLPRSPRRYTAENSVKFGAPRDTDHPELRQALAMEVWESIFNTVEPGSKITVLTNGPLTNLAKLIVSNKNYSSLIQEVFIVGGHTRNVDGEKGNVFTVPSNKYAEFNMFLDPLAAKTVFDSELNITLIPIGSQQRASSFTKILESFRGARKTPELVFARRLLSMLYRLQKTNTRYQHMEIFLGEILGSVVSTGDSSNLKATFKTMALKILANGVESKDGEILIDNRAGREIRVLENVNLSTYSELYAKQLSEEKQSAIVGSFKVQTRMWSKLQKQINPAN 887
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2417426 2421844 + BLOR18126 Blo07g00194 62718

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00194 887 Pfam Inosine-uridine preferring nucleoside hydrolase 503 755 IPR001910 GO:0016799
Blo07g00194 887 Pfam Inosine-uridine preferring nucleoside hydrolase 32 343 IPR001910 GO:0016799
Blo07g00194 887 Gene3D - 20 379 IPR036452 GO:0016799
Blo07g00194 887 SUPERFAMILY Nucleoside hydrolase 500 855 IPR036452 GO:0016799
Blo07g00194 887 SUPERFAMILY Nucleoside hydrolase 29 376 IPR036452 GO:0016799
Blo07g00194 887 Gene3D - 500 859 IPR036452 GO:0016799
Blo07g00194 887 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 4 879 - -
Blo07g00194 887 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE FAMILY PROTEIN 4 879 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00194 - - - jre:109005929 1349.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00194 Blo-Chr7:2417426 Blo17g00142 Blo-Chr17:1317321 2.26E-07 dispersed
Blo07g00194 Blo-Chr7:2417426 Blo01g01197 Blo-Chr1:44462023 5.73E-06 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g387 . . . . . . . . . . . Cma14g01653 . Car14g01487 . . Cpe03g01397 . . . . . . . . . . . . . . . . Cone7ag0188 . Lsi05g01487 . . Cme06g00677 . Blo07g00194 . . . Bpe13g00641 . Bma06g01525 . . Cmo14g01697 . . . . . . . . . . . . . Cla05g00603 Cam05g0664 Cec05g0673 Cco05g0668 Clacu05g0658 Cmu05g0627 Cre05g0696 . Csa03g01402 Chy06g00645 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001428 0 17 1 1 1 2 2 2 2 2 2 1 2 2 2 2 2 3 2 2 2 2 3 3 3 2 2 2 3 2 74
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00194 Blo_Chr07 FPKM 11.943093 10.055325 0.41169 0.550039 11.743212 10.649031 10.746175 0.0 0.0 0.0