Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00200 ATGGCGGCTTCTGGTTTTGAGGGCTTTGAGAAGAGGCTGGAGCTCGATTTCTTCGGGGACGACGCGATTGAGCATATGGGTCTTCGGAGGTTGGACTACGAGTCATTGGAACACGTCCTTCACTCCGTCCAGTGCACCGTCGTTTCCGCCGTCGGGAACCACTACTTTGACGCTTACGTGCTATCGGAATCAAGCCTATTCGTCTACCCAACGAAGATCATCATCAAAACATGTGGGACGACGCAACTACTCAAATCGGTCCGTCCATTAATCCACTACGCAAATCTTTTAGGCCTCAATATCTGTTCTTGCCGATACACCAGAGGCAGCTTCATCTTCCCCAAATCACAGCCTTTTCCCCACACTAGTTTCAAAGAAGAAGTTATCTATCTGGAAGCGAATTTACCAATTAATCTCTGCTTCAGAAAAGCCTCAGTTATGCCCTCCAAACTCTCTTCTCACTCATGGCACGTTTTCTCCGCAACCGACGAACGCCGGGCGATGATTCATCGGCAAGAGCTATATTACACAGTTGAAATCTGCATGACGGAGCTCGATCGCGCTCTCACCCGAAAATTCTTCCGTCGTCCTAACGATGCCAAGACTGGCGACTCTGCCGGAAAAGAGATAACTGACATCACAGGCATAGGCGAAATCAATCGGAACGCTCTCGTTTGTGATTTCGCGTTCGACCCGTGCGGCTACTCGATGAACGGAATGGACGAAGATCGCTACTCAACCATCCACGTTACGCCGGAAGATGGTTACAGCTACGCTAGCTTCGAATGCATGGGGTCAGTCTACGACGATCCGGATAAGTTATTTCAGATGATGAAGAAAGTAGTTCAAATTTTCCGGCCATCGACGATGTCGGTTTCGACAACCAGCGCCGCGCATGAGGTGTGGACGCGCATAGCCAGCGCCCTTGAGCCACTCGGATTGAAACGCCGGAGTTGTTCATTAGACGAGTTCCCGGCGGCAGGAAACGTAGTGTTCCAGACGTTTAACACACGCCGGAAATATGTAGCCCCAGAATATGCTAGCACTGGAATGTTAAACGAAAGAAGCGATGTGTATAGTTTTGGGATTCTCATCATGGAGATCATCTCTGGACGGAATCCGGTCGACTATTGGCGTGCGCCTTGCGAGGTGAATTTGGTTGAGTGGCTTAAGACAAAGGTTACGAATCGGAATGCAGAGAGAGTTCTCGATCGGAAGTTGCTGGAGAAGCCTTCTTCACGAGCACTCAAACGAGCCCTTTTAGTAGCTTCACGGTGTGTGGATCTAAACGCTCAAAAGCGGCAGAAAATGGGGCACGTTATACACATGCTCGAGGCGGATGAGTTTCCTTTCAAAGATGATCGGAGAGCGGGACGAGAACTAGGACGATCCCAGCGGGAAAATCTGAGGGATCAGTTGATGGACAAAAGAGTGAGTGAATCAGGAGATAGCAGTGGGTATGAAAGTGGAGCTCAGATTCATCGCCTTCTATGGAGAAAGCAAGAATCTGAAGACCAATTATTGTGTAATGAAGTGGTCGCGACAGGAGTTAATAAGGAGGCCATTCCGGTGGAGCCTGTGGCGTATCCGGTGGAGACGCAAAGAGAGCATCGGTACCCTTCCTCGTCGGACGAAGAGTCGCCGGAATTGCTAGAACCCGGTCCTCTGAGAGTGGTAGGAAAACACATTTTGACAGAGAGATCGTTGGAGATTGTTTCTGTTCCCTCGCACGATTACCATTTGGAATTCTCACTTCTTTCGCACCGAGGCTATTACCCAGATTCCCCCGATAAACAAAACCAAGATAGTTTCTGTATTAGAACTCAAATCCAAGGTGACCCGAGTATTCATTTTTTCGGAGTTTTTGATGGGCACGGCCAATTCGGAGCAGAGTGTTCTAATTTCGTCAAGGACAGGCTCGTAGAGATACTATCAAACGACCCCACATTGTTGAGCGATCCGGTGAAAGCCTTCAATCTGGCGTTTTCAACGACGAATCACGAACTACACGAAAGTGAAATTGACGATTCCTTAAGTGGCACGACAGCAATCACTGCGCTTGTGATCGGAGAAACCCTTTTCGTTGCAAATGTGGGTGATTCTAGGGCGGTGATTGCCGTTAAAGAAGGGAATCAAATTATCGCCGAAGATCTTTCAAAAGATCAAACACCATTTAGGAAGGATGAGTGTAAGAGAGTAAAGCTCTGTGGGGCTAGGGTTTTGAGTGTTGATCAAGTGGAAGGATTGAAGGATCCTGATGTTCAGAGCTGGGGTGATGAAGAGAGTCAAGGGGGTGATCCTCCACGCTTGTGGGTCCAGGGTGGGATGTACCCTGGGACTGCATTTACAAGGAGCGTGGGAGATAGAATTGCTGAGGATATTGGTGTTATTGCAGAGCCTGAAGTGTCAATGATTCAGCTGGCTCTAAATCATCTTTTCTTTGTTGTGGCAAGTGATGGAGTTTTTGAGTTCCTCTCTAGCCAAACTGTCGTCGACATGGCGTCGAGATATACAGATCCCCGCGATGCCTGCTCTGCAATCGCTGGAGAATCATACAGACTATGGCTGGAACATGAAAACCGGACTGATGATATAACGATCATCGTTATTCATATCAAAGGGTTGTCGAATTCGGATGCCGTTGTTAGTGCTGCCTCCAGCGTGATGAGAACTAGGCCAGGAAAAGGAGCATCGGAGTTATCCGCTACCGCTGGTGGGTCCGAATTTTATCGTTCAGCAAGAAGTGACTTCTCCGATCTACCAATTTCTCATCGCGTGACGATAATGAATCATAGCCCTGCAATCGTTATACCGTCTCCAATGCATTGCAGACCTTTGGAAGTGGTACGTCCACCTTTTTAA 2862 48.43 MAASGFEGFEKRLELDFFGDDAIEHMGLRRLDYESLEHVLHSVQCTVVSAVGNHYFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSVRPLIHYANLLGLNICSCRYTRGSFIFPKSQPFPHTSFKEEVIYLEANLPINLCFRKASVMPSKLSSHSWHVFSATDERRAMIHRQELYYTVEICMTELDRALTRKFFRRPNDAKTGDSAGKEITDITGIGEINRNALVCDFAFDPCGYSMNGMDEDRYSTIHVTPEDGYSYASFECMGSVYDDPDKLFQMMKKVVQIFRPSTMSVSTTSAAHEVWTRIASALEPLGLKRRSCSLDEFPAAGNVVFQTFNTRRKYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYWRAPCEVNLVEWLKTKVTNRNAERVLDRKLLEKPSSRALKRALLVASRCVDLNAQKRQKMGHVIHMLEADEFPFKDDRRAGRELGRSQRENLRDQLMDKRVSESGDSSGYESGAQIHRLLWRKQESEDQLLCNEVVATGVNKEAIPVEPVAYPVETQREHRYPSSSDEESPELLEPGPLRVVGKHILTERSLEIVSVPSHDYHLEFSLLSHRGYYPDSPDKQNQDSFCIRTQIQGDPSIHFFGVFDGHGQFGAECSNFVKDRLVEILSNDPTLLSDPVKAFNLAFSTTNHELHESEIDDSLSGTTAITALVIGETLFVANVGDSRAVIAVKEGNQIIAEDLSKDQTPFRKDECKRVKLCGARVLSVDQVEGLKDPDVQSWGDEESQGGDPPRLWVQGGMYPGTAFTRSVGDRIAEDIGVIAEPEVSMIQLALNHLFFVVASDGVFEFLSSQTVVDMASRYTDPRDACSAIAGESYRLWLEHENRTDDITIIVIHIKGLSNSDAVVSAASSVMRTRPGKGASELSATAGGSEFYRSARSDFSDLPISHRVTIMNHSPAIVIPSPMHCRPLEVVRPPF 953
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2474188 2488168 + BLOR18132 Blo07g00200 62724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00200 953 SMART PP2C_4 582 870 IPR001932 -
Blo07g00200 953 Pfam Protein tyrosine and serine/threonine kinase 337 444 IPR001245 GO:0004672|GO:0006468
Blo07g00200 953 MobiDBLite consensus disorder prediction 458 487 - -
Blo07g00200 953 MobiDBLite consensus disorder prediction 458 482 - -
Blo07g00200 953 Pfam Adenosylmethionine decarboxylase 4 335 IPR001985 GO:0004014|GO:0006597|GO:0008295
Blo07g00200 953 SUPERFAMILY Protein kinase-like (PK-like) 332 444 IPR011009 -
Blo07g00200 953 MobiDBLite consensus disorder prediction 533 552 - -
Blo07g00200 953 ProSitePatterns S-adenosylmethionine decarboxylase signature. 58 68 IPR018166 GO:0004014
Blo07g00200 953 Pfam Protein phosphatase 2C 606 848 IPR001932 -
Blo07g00200 953 SUPERFAMILY S-adenosylmethionine decarboxylase 9 336 IPR016067 GO:0004014|GO:0008295
Blo07g00200 953 ProSiteProfiles PPM-type phosphatase domain profile. 582 872 IPR001932 -
Blo07g00200 953 Gene3D - 64 338 - -
Blo07g00200 953 SUPERFAMILY PP2C-like 569 874 IPR036457 -
Blo07g00200 953 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 4 1 340 - -
Blo07g00200 953 ProSitePatterns PPM-type phosphatase domain signature. 618 626 IPR000222 GO:0043169
Blo07g00200 953 CDD PP2Cc 588 872 IPR001932 -
Blo07g00200 953 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 1 340 IPR001985 GO:0004014|GO:0006597|GO:0008295
Blo07g00200 953 Gene3D - 1 63 - -
Blo07g00200 953 TIGRFAM SAM_DCase: S-adenosylmethionine decarboxylase proenzyme 6 297 IPR001985 GO:0004014|GO:0006597|GO:0008295
Blo07g00200 953 Gene3D - 574 874 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00200 Blo-Chr7:2474188 Blo14g00511 Blo-Chr14:7094929 1.95E-131 dispersed
Blo02g00563 Blo-Chr2:10228097 Blo07g00200 Blo-Chr7:2474188 0 transposed
Blo02g01216 Blo-Chr2:44134734 Blo07g00200 Blo-Chr7:2474188 3.49E-159 transposed
Blo17g00541 Blo-Chr17:9349407 Blo07g00200 Blo-Chr7:2474188 5.27E-07 transposed
Blo02g00562 Blo-Chr2:10177700 Blo07g00200 Blo-Chr7:2474188 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84369 PF01536 SAM_decarbox 6.00E-101 No_clan Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00200 - - mdm:103403816 594.349