Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00223 ATGCTGCCACTTGTGAGCGACCGGAGGGATCCACAACAGTCGGAGGTTGGGGAAGTGCCATTTGCAGTGCTGTTTGTGAGGAAATTCATACAAGGAGTTAAGCTAGTGATCATTGAGGAATTGCATGGGCAATCGAGGATGATGAAGACGACTCTGATCTTCGCCATGGTGACGATGCTCTGGGCCGGAGCTGACTCGCAGTCGTCGTCTTGTACGAGCGTGTTAATCAGTCTGTCTCCGTGCTTAAACTACATTACCGGAAACTCTTCGACCCCATCTTCTGGGTGCTGCTCGCAGCTGGCAAGCGTCGTCCAGTCGCAGCCTCAATGCCTATGCCAGGTCCTCAATGGCGGCGGTTCGTCGCTTGGGCTCAACATTAACCAAACTCTGGCTCTGGCCCTACCCACCGCCTGCAATGTTCAGACTCCATCCCTTACTAGATGCAATGGTGAGCACAGATGCAAAGCCCATATTAGTTATGTTGTAGGTGCAAGGTATTGGGGGGCTTTGAGGGTAACCAATCCTAGGGTGTCCAAGGAGTTCCCTTATTTAGTGAGAGTTGAAGCTTTGGTCGAGGTAGAGAACAAGGGCTCTCAAAGGAGTCCTCTCCTAAAAGTCGGGTTTCAAAAAGAACTATTGAAGAAATATGCTAAGTCTGCACTAATGGCGAAAAATGGCTCTGCATGGTATGCGGAGGAAAGTTATAGAAGAAGAAGACCCATATCGTCCTTTTTCAGTTGTCCGAAACTATTTACTGGTTTTTCAGTGAAGGGCTTTACGGAAATGGAAACTCAGATGAGTCCGACTTCCATACTTGATACCAAATCATTTTCTTGTTTGATTAATCCTTTCTGGTACAAAACGAAGACCCCCAAAACGTCGCCGACCGAAAGTAGACGCCATTGGGACAAGATGGATTCGAAGAGAATAGGCCTCGGCATTGTTGATGATCTCACCGATCAAAGTTTTCCAATGGTTCTGTTCGGTTCGCACCTTAAGATTCGAAGCCCTTCTCTCTACCCTCCATTCCCTTCTCCTCCAGAACCTCCGAAATCATCAGCTGATTTTTGCATCAAGACTGAAAGTTCTCGAGTGGGATCCTTTTCGCCGAGAAAGTCAATCTCCGGCATTGAGACGACCTCTCGGGCTTTCACCCGGTGTCTCTCCGCTACTGAAATGGAGCTTTCTGAGGAATATACTTGCGTGATTTCTCATGGACCAAACCCCAAAACCACTCATATATTCGACGACTGCATTGTGGAGAGCTGCACTGGTTTGTTCTCTGCTTCTGCGAAGAAGAAGAAGAACAAGGATCGCCATGAAAACTTCCTCAGCTTCTGTTTCACTTGCAAGAAGAGCCTTGGGCAAGGAAGAGACATATACATGTACAGGTTGCAATTCGAACCCAAATCTTTCACTTTGATCTTCAATTCCATGCATTGCTGTTCATCAGATTATTCAATTTCTTCCATGTTTAAATCAAACGCAACTACAGTTTTAGATCCATAG 1509 46.79 MLPLVSDRRDPQQSEVGEVPFAVLFVRKFIQGVKLVIIEELHGQSRMMKTTLIFAMVTMLWAGADSQSSSCTSVLISLSPCLNYITGNSSTPSSGCCSQLASVVQSQPQCLCQVLNGGGSSLGLNINQTLALALPTACNVQTPSLTRCNGEHRCKAHISYVVGARYWGALRVTNPRVSKEFPYLVRVEALVEVENKGSQRSPLLKVGFQKELLKKYAKSALMAKNGSAWYAEESYRRRRPISSFFSCPKLFTGFSVKGFTEMETQMSPTSILDTKSFSCLINPFWYKTKTPKTSPTESRRHWDKMDSKRIGLGIVDDLTDQSFPMVLFGSHLKIRSPSLYPPFPSPPEPPKSSADFCIKTESSRVGSFSPRKSISGIETTSRAFTRCLSATEMELSEEYTCVISHGPNPKTTHIFDDCIVESCTGLFSASAKKKKNKDRHENFLSFCFTCKKSLGQGRDIYMYRLQFEPKSFTLIFNSMHCCSSDYSISSMFKSNATTVLDP 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2791803 2799901 - BLOR18155 Blo07g00223 62747

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00223 502 Pfam Probable lipid transfer 55 148 IPR016140 -
Blo07g00223 502 ProSiteProfiles Zinc finger FLZ-type profile. 442 502 IPR007650 -
Blo07g00223 502 CDD AAI_LTSS 78 140 - -
Blo07g00223 502 Pfam zinc-finger of the FCS-type, C2-C2 434 464 IPR007650 -
Blo07g00223 502 Gene3D - 68 145 IPR036312 -
Blo07g00223 502 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 70 149 IPR036312 -
Blo07g00223 502 PANTHER FCS-LIKE ZINC FINGER 8 218 491 IPR044593 -
Blo07g00223 502 PANTHER FCS-LIKE ZINC FINGER 8 218 491 - -
Blo07g00223 502 SMART aai_6 71 148 IPR016140 -
Blo07g00223 502 PRINTS Plant phospholipid transfer protein signature 70 86 IPR000528 GO:0006869|GO:0008289
Blo07g00223 502 PRINTS Plant phospholipid transfer protein signature 91 105 IPR000528 GO:0006869|GO:0008289
Blo07g00223 502 PRINTS Plant phospholipid transfer protein signature 125 142 IPR000528 GO:0006869|GO:0008289
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00223 - - - zju:107407937 257.684
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00175 Blo-Chr3:4398055 Blo07g00223 Blo-Chr7:2791803 1.67E-06 dispersed
Blo06g00810 Blo-Chr6:31360667 Blo07g00223 Blo-Chr7:2791803 5.52E-10 dispersed
Blo07g00223 Blo-Chr7:2791803 Blo12g01092 Blo-Chr12:28596716 1.01E-22 dispersed
Blo17g00575 Blo-Chr17:10692345 Blo07g00223 Blo-Chr7:2791803 1.69E-08 dispersed
Blo07g00223 Blo-Chr7:2791803 Blo07g00225 Blo-Chr7:2799681 5.16E-09 proximal
Blo07g00223 Blo-Chr7:2791803 Blo07g00224 Blo-Chr7:2796072 8.13E-13 tandem
Blo04g01303 Blo-Chr4:27910351 Blo07g00223 Blo-Chr7:2791803 4.62E-11 transposed
Blo10g00019 Blo-Chr10:197555 Blo07g00223 Blo-Chr7:2791803 4.36E-34 transposed
Blo11g00046 Blo-Chr11:374728 Blo07g00223 Blo-Chr7:2791803 1.54E-08 transposed
Blo14g00313 Blo-Chr14:3209602 Blo07g00223 Blo-Chr7:2791803 6.01E-14 transposed
Blo15g00782 Blo-Chr15:26690039 Blo07g00223 Blo-Chr7:2791803 5.25E-13 transposed
Blo01g00122 Blo-Chr1:1664574 Blo07g00223 Blo-Chr7:2791803 1.06E-59 wgd
Blo02g00532 Blo-Chr2:8898226 Blo07g00223 Blo-Chr7:2791803 1.27E-09 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g527 . . . . . . . . . . Cma06g01397 . Car06g01204 . Sed02g1301 . . Bhi01g00791 Tan10g0822 Cmetu01g2184 . Hepe05g1566 . Lcy11g1562 . . . . . . . . . . . . . . Cme06g00596 . Blo07g00223 Bda11g00584 Bda13g00111 . Bpe13g00600 Bma02g00835 . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g01309 Csa03g01312 Chy06g00564 Cme01g01576
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001192 1 2 1 1 1 3 3 3 3 3 3 3 3 3 3 3 3 4 3 3 2 2 1 2 3 3 3 2 3 4 77
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00223 Blo_Chr07 FPKM 0.170804 0.29459 4.565042 4.698373 27.181328 24.663958 23.546972 16.679623 17.801968 15.896869