Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00230 ATGATTGAATACTCACATTATCAAATCTCTGACTGTAATAATGGTGAGGACCCAGTTGAGAACCAGAGGGTTTATTGGGTGGGACAAGCTGCAATATCTCATCTATGCTTCATCGGAGTAGTTGGAGTTGAATGTATTGCTGTTCTAGCCCGGATCTGCTTTCTGGGAACTGATTATTGTGTAAATATCAAGCATTTTCACATTAGCCCCAAAAATTCCAAATGGCTTCAAGAAAATCTCACAGCAGATATGGATATGAAAGTGAAAGCTATGATAAAACTTATCGAAGAAGATGCAGAGTCTTTTGCGAGGAAGGCAGAAATGTACTACAAGAAAAGGCCAGAGCTGATGAAATTGTTAGAGGAAATTTACCGAGCTTACCGAGCGTTGGCGGAAAGATATGATTATGCAACTGTGGAGCTTCGTCAAGCCCATCGGACGATGGCGGAGGCATTTCCAAACCAAGTCCCTTGTGATCTGATCAATGAATCGCACTCAGAAACTTCCGTTTCTGGACCCGAAGATCCTCGTACTCCCGAAATGTCACATTCAATTCGTACATTATCCGACCTGGATGACTTGTCAATCAGCTTTCATGGAATTAGCAAAAGGGGTCATAGACAAGTCGACGAGGATGGATTTTCTCTATTATTGAGCGAAAACCAGAATCTCGAGGGATTTGGCGACTCATCAGAAACCGAAGTTGAAAGTGTGAATGGAATGTTGACCAAGATAGAAGCTGAGAAAGAATCTATTTTTCTTAAATACCAGCAGGCCTTAGAAAAATTATCAAGTCTGGAGACCGAACTTAAAAATGTGCAACAAGAGGCTGTGGGGCTTGATCAACGAGCAAGCAAGGCCGAAATTGAGATCAAAATATTGAAGGAAGCTCTTTCTGGAATGGAGTCAGAAAGAGATGCTAATCTTCTTCGGTATAATCAGTCGTTGGAAAGGATATCTAATCTGGAGAATCTACTGTCTCTTTCTCAGGAAGAAGCTACAGCGCTCGATATTAGAGCCGGCAAAGCAAAAACTGAATCTCAATATCTCAGATTACAACTTTCGAGTTTGGAGTACGAAAAGGAAGCCAGTCTTCGGCAGTACAAGCAATGTCTCGAGAAGATAGCTCTCATGGAGGCTAAGATTGCTGCAGCTGAGGAAAATTCGAGGGTACTAAATGACCGTGTAGAAAGAGCAGAATCTGAAGAAAATTCGTTGAAGGAGACGATTAATGAGTTGATTAAAGAGAAAGAAACGGCATCTCTCGAGAAGTGGTTGGAGACGATGGTGAAGATGGAGAGTGAAATTTCTCAGGCTCAAAATGATGCAAAAAAACTAAATGATGAACTCCTGACAGTCTCGAATAAGTTAGACAGTGCGGAAGTAAAATGTTCTCAATTGGAGGACTCAAATCGAGCCCTGCAATTAGAGGCGAACAATCTGATGGAGAAGATCACAATGAAAGATCAAGAACTTGCTCAAAGGCAAGTCGAATTTGAGAAATTTCAGATCCGAATGCAAGATGAACAGTCGCGGTTTAAGCAGGTTGAATCCAGTCTTCACACATTGCAAGACTTGCATTCTCGATCTCAAGATGAGCAGAAAGCTCTTACCCTGGAGCTTAAAAATGGTCTTCGGATGTTGAAGGATTCGGGCATACACAAACTTAGTATGGAGGAAGAGCTTCAAAAGGTTAAGGAAGAGAATAGGAGCCTGAAGAATCTAGAGAATGAAATTTTCAGCTTGAAGGAGATAAAACACAAACTTGAAGAAGAGGTATTTCACAGAGCAGATTATAGCAATGCGCTGGAGCGGGAAATTCACTGTTTGAGGGAAGAAATAAAAGGCATGAATGGAAGATACCAGGCGATAATGATGGAGGTTGAATCCGTAGGTATGAATCCGGAAAGCCTCTCATCTTCTGTAAAGGAATTGCAAAATGAGAATGCTAGGTTTGGAGACACCCTCGAGATGGAGCGTACCAGAGGAGAAGCTCTGTCTGCTAAGTTGAATTCTATGGAGAAAATTTCAAAAGATAATGCGATTCTTGAGATTTCTTTGGCAGAAATGAACGAAGAGTTGAAAAAGCTAAGGGTGAAGGAGAAGGACTTCCAAGAGACGTGCCATTTTCTTCAGGAAGAGAAAACCAGTCTTGTTGCTGAAAAGGCCAACTTGCTGATACAGCTGCAGATTGTAACAGAAAATATGCAGAAGCTCCTGGAGAAGAACACCTTACTGGAGAATTCCTTATGTGGTGCAAATGTTGAGCTTGAAGGTTTGAGGGATCATTCAAAGAGCTTAGAAGAAGTCTGCAAGTTACTGAAGAGTGAGAAATCTAATCTTCTTAGCGAAAGAGATGAATTGGTATCTCAATTGGCAAACGTCGAACTGGGGCTCGGAACTCTCGAAAAGAAATTTTCAAATCTTGAAGATAAGTATACTTCCTTGGAAAATGAAAACGAGATGACAATCGATCAAGTCGAAGAATTGAGGTCTTCCATTGTTGCCGAGAAAGAAGAGCGGGCAAGTTACAAGACATTAAATGAGACGAGAATGTCTGGTTTGGAGTCCAATATTCTTCTTCTGCAACAAAAAAGTAGACCGGGGAAGAAAGAATTTGAAGAAGAACTAGAGAAGGCTGTAAATGCTCAGGTAGAGATCTTCATCCTCCGGACATTTGTCGAAGATTTGGAGGCGAAAAATTGTTCGCTATTAATCGAATGTCAAAAACTTAACGAGACATCCAAATTTTCGAATAAGCTGATCGTGGAGTTGGAGCAGGAAAATCTCGAGCAGCAGGTGGAAATAGAATTCTTGGTGGACGAAATCGAAAACTTACGGAGGGGGATTCATAGAGTGTTCAAAGCTGTTCAATTCAATCCGGAATATGGACAAAAAGATGAGATTGAAAGAGAGAAACTTCTTTTATTGAACATTTTGGACACAGTTGAGGAATTGAAAACTTGTTTGTGCAGAAACAAAGATGAGAAACAGCAGCTTCTGATTGAGAACTCAGTCCTCATGACTCTGCTTGGGCAACTCGGAATCGATGGTGAAGAACTTCAGAGACAGAAAAATTTTCTCGAGAATGAGTTCAAAATCCTGAAAGAAGAGCTGGCTTTGAATGAAAAAGAGAAATATGATCTGCAAGAGAGGACGAGGCAATTGACGTTTGAAGCTACCCAGAAAGAGCAGCACGAGAAAATTTTGGCCGGCGAAATCCAAATTCAAAAACTCAAGTTGGAAAATTTGAGGAGAGATTACCTGGTACTACAGAAAGAAAATTCAGATTTGATTAAAGAAAAGAGGTCTGAGTTAGAGAAGTTTTCGGACCTCGAAGATGCATATCATGTTCTTGAAGAAGAAAATGAAATAATCATCGAAGCAGGTGTAGCACTCGACATATTCTCGTTAGTTTTCGAAAGCTTCACAGCAGCGAAAGCTATGGAAATGAAAGCTCTTAACGAAGATCTCGATTGTCTCCATCTGGCCAATAGTGATTTAAAGGACAAGGTAGAGGAGATGGACGAAGCATTGGTAATGAAAGAAACGGAAATTCTCCGATTGAATGAGTTGGTCGAGAAGTTAGACGATGAGCTGCATGAAGTCAAAAAGCATAATGATCTACTAATACATGAAATTGTACTTGGAAATAATTTTCTGAGACAGAAAGTAGAAGGGCTTTCGGAAACCGAACAAGAGTTGAGGGATTCGCAAGAATTAAACGCCAAACTGTGCAATAGAGTTGAGGAATTGAAGATAGAATGTAAAGAATTGACATTAATTCGAGAAAATCTAGAAATTGAGAATCTTGAACTCTGTACGGATGGCCACCGACAGCGCGAAGAAATCGATTGGCTTCTTGAAATGAATGAAACTTTAAAATCAGAGGTAGATGTGTTGTACGAGGAAGTCGAAGAATGCAGGATTAGAGAGGATAGCCTCAGTTCAGAGCTTCAAGAGAGAAGAGACAGGTTTGAACTTTGGGAAGCTGAAGCTGCATCGTTTTATTTCGATCTTCAAGTCTCGGCTGTTCGTGAGGTTTTTCTTGAAAGTAAGCTTCATGAAATTACTCGAGTATGCAAGAAGATTGGAGGTGAAAGTGCAGCGAAAGATGTGGAGATTCAAAGTCTAAGAGAAAGTTATCAGATCCTGGAAAGTGAAATGGTGAGGCTAAAAGCCGAGTTTTCTGCAACGGCTTCGAAAAAGAACGTAGAACTAATTTCAAACACAAGCGTTGAAGTAAGAGGATCGGCGAAAGACGGAGAAGAGTCCAAATTTGGGGGGACTTCACATTTAGAGATTGCAAATAATGGAAGGATGGCCCTTCGGAATGAGTTTGATCAAACTTTGAAGCCGCATGTGAAAAGATCCGGAAATGGGACACTCATGAAAGACATCCCTCTCGATCGAGTCTCGGGTTTTTCAATCTATGGACGGACTAAAAGGGAGAGCTGTGGGGCCAATGACCAAATGCTACAATTGTGGGAAACAGGGGAGCTGAAAACCGACCAGAATCTAATATCCAGTAAGGCTCATAACCCAACAATCTTACCTCTCCCGACCAACCAGAACAATCGCGAGGAACAAAATCATTCAGGTTCTTCGTCGGAAATAGAGACAGAACCCTTGTTGGGCGATGACAGGTACGAGAGATCCTCTAGCATCAGAGAACGAAGTCAAGGAGGCAAAAAGAGAAAGATTCTACTGAGGCTGGCCTCGGATGCTCAGAAATTGACGAATCTTCGAACTACAGTTCATGATTTGAACAAGAGAATGGAAACTAAAAACTGGAGCAAGAAGGAAAGCTATATCGAATACGAGATGGTTTATAAACACCTGAAAGAAGTCGAAGAAAGTGTTCTTCAGCTGGTTAACGTGAACGATCAATTGACGAAGAACGCAGAGCAAAGTCCTTCGTCCTTGGCCGGAAAAACCACTTCGGAGATGGAGATTGAAAACATCGCCAAAAACAACATGATGGAGCAGGCAAGAAAAGCGGCCGAAAAGATTGGAAAGCTGCATTTAGAGGTACAAAACATTCAAGTCGTGTTGCAGAAACTGGAAGAAGAGAAGAAAAGAAAATGGAAGACAAGATTTTCGAAGAACAAAACAAGCATCGTACTGAAGGATTTCATTTACAACGGCAGGAAAAGCGGCGACAAGGACAAGAAGAACAGCTTCTGTGGGTGCCAAGGACCTGCAAAGATCGAAGATTGA 5220 41.3 MIEYSHYQISDCNNGEDPVENQRVYWVGQAAISHLCFIGVVGVECIAVLARICFLGTDYCVNIKHFHISPKNSKWLQENLTADMDMKVKAMIKLIEEDAESFARKAEMYYKKRPELMKLLEEIYRAYRALAERYDYATVELRQAHRTMAEAFPNQVPCDLINESHSETSVSGPEDPRTPEMSHSIRTLSDLDDLSISFHGISKRGHRQVDEDGFSLLLSENQNLEGFGDSSETEVESVNGMLTKIEAEKESIFLKYQQALEKLSSLETELKNVQQEAVGLDQRASKAEIEIKILKEALSGMESERDANLLRYNQSLERISNLENLLSLSQEEATALDIRAGKAKTESQYLRLQLSSLEYEKEASLRQYKQCLEKIALMEAKIAAAEENSRVLNDRVERAESEENSLKETINELIKEKETASLEKWLETMVKMESEISQAQNDAKKLNDELLTVSNKLDSAEVKCSQLEDSNRALQLEANNLMEKITMKDQELAQRQVEFEKFQIRMQDEQSRFKQVESSLHTLQDLHSRSQDEQKALTLELKNGLRMLKDSGIHKLSMEEELQKVKEENRSLKNLENEIFSLKEIKHKLEEEVFHRADYSNALEREIHCLREEIKGMNGRYQAIMMEVESVGMNPESLSSSVKELQNENARFGDTLEMERTRGEALSAKLNSMEKISKDNAILEISLAEMNEELKKLRVKEKDFQETCHFLQEEKTSLVAEKANLLIQLQIVTENMQKLLEKNTLLENSLCGANVELEGLRDHSKSLEEVCKLLKSEKSNLLSERDELVSQLANVELGLGTLEKKFSNLEDKYTSLENENEMTIDQVEELRSSIVAEKEERASYKTLNETRMSGLESNILLLQQKSRPGKKEFEEELEKAVNAQVEIFILRTFVEDLEAKNCSLLIECQKLNETSKFSNKLIVELEQENLEQQVEIEFLVDEIENLRRGIHRVFKAVQFNPEYGQKDEIEREKLLLLNILDTVEELKTCLCRNKDEKQQLLIENSVLMTLLGQLGIDGEELQRQKNFLENEFKILKEELALNEKEKYDLQERTRQLTFEATQKEQHEKILAGEIQIQKLKLENLRRDYLVLQKENSDLIKEKRSELEKFSDLEDAYHVLEEENEIIIEAGVALDIFSLVFESFTAAKAMEMKALNEDLDCLHLANSDLKDKVEEMDEALVMKETEILRLNELVEKLDDELHEVKKHNDLLIHEIVLGNNFLRQKVEGLSETEQELRDSQELNAKLCNRVEELKIECKELTLIRENLEIENLELCTDGHRQREEIDWLLEMNETLKSEVDVLYEEVEECRIREDSLSSELQERRDRFELWEAEAASFYFDLQVSAVREVFLESKLHEITRVCKKIGGESAAKDVEIQSLRESYQILESEMVRLKAEFSATASKKNVELISNTSVEVRGSAKDGEESKFGGTSHLEIANNGRMALRNEFDQTLKPHVKRSGNGTLMKDIPLDRVSGFSIYGRTKRESCGANDQMLQLWETGELKTDQNLISSKAHNPTILPLPTNQNNREEQNHSGSSSEIETEPLLGDDRYERSSSIRERSQGGKKRKILLRLASDAQKLTNLRTTVHDLNKRMETKNWSKKESYIEYEMVYKHLKEVEESVLQLVNVNDQLTKNAEQSPSSLAGKTTSEMEIENIAKNNMMEQARKAAEKIGKLHLEVQNIQVVLQKLEEEKKRKWKTRFSKNKTSIVLKDFIYNGRKSGDKDKKNSFCGCQGPAKIED 1739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2855471 2861587 + BLOR18162 Blo07g00230 62754

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00230 1739 Coils Coil 1151 1213 - -
Blo07g00230 1739 Coils Coil 555 592 - -
Blo07g00230 1739 Coils Coil 908 942 - -
Blo07g00230 1739 Coils Coil 1218 1269 - -
Blo07g00230 1739 MobiDBLite consensus disorder prediction 1542 1564 - -
Blo07g00230 1739 MobiDBLite consensus disorder prediction 1513 1564 - -
Blo07g00230 1739 MobiDBLite consensus disorder prediction 1718 1739 - -
Blo07g00230 1739 Coils Coil 1671 1691 - -
Blo07g00230 1739 Coils Coil 256 304 - -
Blo07g00230 1739 MobiDBLite consensus disorder prediction 1513 1540 - -
Blo07g00230 1739 Coils Coil 673 714 - -
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 229 1399 - -
Blo07g00230 1739 Coils Coil 1291 1311 - -
Blo07g00230 1739 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 59 141 IPR011684 GO:0003779
Blo07g00230 1739 Coils Coil 1011 1045 - -
Blo07g00230 1739 Coils Coil 600 620 - -
Blo07g00230 1739 Coils Coil 1614 1634 - -
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 1409 1735 - -
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 67 211 - -
Blo07g00230 1739 MobiDBLite consensus disorder prediction 164 183 - -
Blo07g00230 1739 Coils Coil 722 749 - -
Blo07g00230 1739 Coils Coil 1074 1122 - -
Blo07g00230 1739 Coils Coil 368 491 - -
Blo07g00230 1739 SUPERFAMILY Tropomyosin 220 418 - -
Blo07g00230 1739 Coils Coil 1375 1395 - -
Blo07g00230 1739 Coils Coil 757 833 - -
Blo07g00230 1739 Pfam KIP1-like protein 67 135 IPR011684 GO:0003779
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 4A 1409 1735 - -
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 4A 67 211 - -
Blo07g00230 1739 PANTHER PROTEIN NETWORKED 4A 229 1399 - -
Blo07g00230 1739 Coils Coil 312 332 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00230 - - - csv:101218746 1442.56
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00526 Blo07g00230 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00737 Blo-Chr5:26232015 Blo07g00230 Blo-Chr7:2855471 1.31E-21 dispersed
Blo07g00230 Blo-Chr7:2855471 Blo10g00017 Blo-Chr10:179770 2.60E-42 dispersed
Blo13g00093 Blo-Chr13:1633458 Blo07g00230 Blo-Chr7:2855471 4.61E-09 dispersed
Blo02g00526 Blo-Chr2:8659444 Blo07g00230 Blo-Chr7:2855471 0 wgd
Blo05g00374 Blo-Chr5:4475287 Blo07g00230 Blo-Chr7:2855471 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g541 . . . . . Bpe14g01206 . . . . Cma06g01386 Cma14g01737 Car06g01195 Car14g01566 Sed02g1335 Cpe08g00276 Cpe03g01456 Bhi01g00773 Tan10g0800 Cmetu06g0678 . . . . . . . . . . . . . . . Lsi05g01629 . . Cme06g00583 Blo02g00526 Blo07g00230 Bda11g00592 Bda13g00105 . Bpe13g00592 Bma02g00829 . . Cmo06g01392 Cmo14g01776 . . . . . . . . . . . . . Cla05g00517 Cam05g0568 Cec05g0580 Cco05g0578 Clacu05g0565 Cmu05g0536 Cre05g0605 . Csa03g01300 Chy06g00554 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003822 2 2 2 1 2 1 2 1 1 1 1 1 4 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00230 Blo_Chr07 FPKM 450.343933 463.85202 423.709503 393.075958 84.966026 87.058556 74.443031 190.05011 205.571747 194.083862