Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00233 ATGGGAGCCGTGCCTTCAACGCCGCGCAGGGCCAGCGGCCGGCCGCAGGAAACGGCGGAGTATTTAATAGGCACCTTCGTTGGAGAAACTTCTTTCCCTATCACCTCTGATTTCTGGCAGAAATTGCTCGAGCTTCCTCTCAATCTGCAGTGGTCGAGTCACCGTGTTGACAAAGCGTGTGAGCTTTTCGGAAGAAACAACTATCGTACCAAGCATCTTGCAAAGATTTTTATACATCTTGTATGGTGCTTGAGAGAGTGTACTTCTACCTCTGGAGCTCCATCCATTATTTACGGGAAGGCAGTTAATGCAGTGTACCTTTCATCTGTTTTTTTGAAGTACTTGATTGAAAATGCCAAAAATGACCGAACTGTGGAGTTATATTTATCTTTGGATGATGAAGAACCAGTATCAAAGGGCATGATAAAAGATCAAAAGATTGAGGATCTTGTCATGCACGCTGTATATGATTTTATTGTCTCAATAGATCTTTCCTTTGCCAGCGCTCATACATATCTTCTCCATTGGGAACTGCTTAATTTTTTGCTCATTACAATGTCAACTCAGCTTCTTGCCGGGCCATCTCCAGGGCCTAATGATCTTAACCCATTTATTGATGCATCTATGGCTCAGGAAAGCACTCTGGTTATTGCAGTGGTCCGGAAACTGTTACTCAACTATATTACTCAGTCCAGCATTCCTTTGAATAATATATCATATTCTGTATTTTCTGAAGTAAGTCAGCCTGGTGTTATACAGAGAGTGGGTTCTGCAGCGGCGAATTTTGTGCTGCTACCATTCAGCTACCTGGTTAATTCAAGTGGTGGAGGCTCTACAAGTCCATTGGCCGATAGTAGTGTACATGTTCTACTAATTCTCATTCATTATCATAAATATGTTGTGGGAAAGGAGACAATAATGGAAAGAAATGATGACATTGCTACAACAGATTCTATTTTGAAAGGAAATATGTACTTCTCTGACAATCCATACTCCAAGGCTCTGGAAAACGCATCTGATATTGAATTTGATCGGACAGGACTGGAGGAAAATGTTCACAATGGTCCAGTGGTGATATTGCCTTTTGCTTCACTATTTGATACCTTTGGAATACGCCTGGCTGATGAGGCTGCTGTCCTTTTGCTTTACTCATTGTTGCAAGGGAATGCTGACTTTCTGGAGTATGTTTTGGTGCGAACTGATTTAGACACAGTGTTGACGCCCATTTTGGAAGCTTTATATAATGCTTCAAGGAGGTCATCTAATCAAATATACATGTTGTTGATTATACTCCTCATCCTTAGTCAAGATTCTTCTTTCAATGCAAGCATCCACAAGCTGATCCTTCCAGCTGTTCCATGGTATAAGGAACGCCTGCTTCATCAAACATCTCTTGGTTCCTTGATGGTGATAATTTTGATAAGGACTGTGCAGTTTAATCTATCTAAACTCCGAGATATTTATCTCCATACAACCTGCCTAGCTACTTTGGCAAATATGGCTCCACATGTCCACCGTTTGAGTTCATATGCATCACAGAGACTTGTCAGTCTCTTTGATATGCTCTCGCGGAAGTATAGCAAACTAGGAGTGCTAAAAGATGACAATATGCATGATGCCAAACGTAGTTCCATTGAAGGAAACAGCCTAACAGATGATATGTCTACTGAATTGCATATTTACACTGACTTCCTGAGACTTGTCCTTGAAATTCTTAATTCGATTCTCACTTATGCTTTGCCCCGAAATCCTGAGTTTATATATGCTGTAATCCACCGGCAGGAAGTTTTTCAACCATTCAAGAATCATCCACGCTTTAATGAGTTAATTGAGAACATTTTTACGGTATTAGACTTTTTCAATAGCCGCATTGATGCACAAAGATTGGATGGTGAATTGTCAGTGGAGAAAGTACTTCAAGTCATTATCATCAACTGTAGATCTTGGAGGGGAGAAGGGTTGAAGATGTTTACTCAATTGCGATTCACATATGAACAAGAGAGCCGCCCAGAGGAGTTCTTTATTCCCTATGTGTGGCAGCTAGTGCTCTCACGCTGTGGATTCACTTTTAATTCTGGAGCCATAAATTTGTTTCCAGCTGATCCAATAGCAGAAGAAGCGGGAGTCGTCGCACGAAATCGGTCTCCGTTGAGTTCAGCTCTTCTTCTACGCCCAGATCTTGCAAAGACGATATCTGCAGCAGCGACCTGCGAAATGGATTACCGGCGAAGAGAATTGTACAAGCTCGTCTTTCTGTTTCTCGTGAGCTTGTTCGGAAGGATTCAATCCTTGTCAGTCACAGTAAACCAGGAGGAATGTGTGTTCGAGTACGTATTCCACGACGGCGACAAAGTTTCTGGCAATTTCGTCGTAGTCGACCATGATATCTACTGGGGCTCCGATCATCCCGGTATCGACTTCACCGTGAAATCTACAGCAGGTAATCTTGTGAAGAGTATAAAGGGATCGACAGGAGAAAAGTTTGAATTTGATGCTCCACGCAGTGGAATGTATAAATTCTGTTTTCACAATCCTACCACCACTCCAGAGACTGTTTCTTTCTACATACATATTGGTCATATTCCCAACGAGCATGACCTCGCCAAAGACGAACATTTGGATCCTATAAACGTTAAAATTGCGGAGCTCAGAGAGGCACTGGAGTCTGTTACGGCTGAGCAGAAATATTTGAAAGCTCGAGATACTCGGCATCGTCTTAGTACGTGGCTTCTTTCCTTGAATATTTTGCTTTCTATCTCACCACTCCTGCACCTTCTACACAATGCATATATGGCTGTTCTTCAATCAGTTGCCAAATGCCCAGACGCATTGCGGAGCCCTCATTCCGAGGCAGTTTCTGCACTGAAAGATGGATTTCTTCCTCGCCACTTTGGCTCCGTTCACCCTGGCTCTGTCACCGTCAACCTTGGCTCCGGTGGTACCCTAGCCTATTCTCTGGACAGACAGAACCCATTTCTTCCAAGATTGTTTGCGGTTGTGGATGACATATTTTGCTTATTCCAAGGGCATATTGAGAATGTTGCTCTTCTTAAGCAGCAATATGGATTGAACAAAACAGCCAATGAGGTGATCATTGCAATAGAAGCTTACAGAACTCTTCGAGACAGAGGTCCCTATCCTGCCGATCAAGTCGTGAGAGATATTGTTGGGAAATATGCATTTATTCTCTATGACAGTTCGTGTAAAACAACATTTTTTGCTTCTGATGTCGATGGGAGCGTCCCGTTCTTTTGGGGGACTGATTCTGAAGGCCATCTTGTGTTATCAGATGATGCAGAGATTGTGAAGAAGGGCTGTGGAAAGTCTTTTGCACCATTTCCTAAAGGTTGCTTCTATACATCCTCGGGTGGGTTGAGGAGTTTTGAGCATCCTCTTAATGAGTTGAAGCCTGTACCAAGGGTGGACAGTTCTGGTCAGGTTTGTGGTGCAACTTTCAAGGTGGATTCAGAGGTTCGGAAAGAAAGCAGTGGGATGCCTAGGGTTGATAGTGCTGCAAACTGGTCTTCAAACTACTGA 3537 42.97 MGAVPSTPRRASGRPQETAEYLIGTFVGETSFPITSDFWQKLLELPLNLQWSSHRVDKACELFGRNNYRTKHLAKIFIHLVWCLRECTSTSGAPSIIYGKAVNAVYLSSVFLKYLIENAKNDRTVELYLSLDDEEPVSKGMIKDQKIEDLVMHAVYDFIVSIDLSFASAHTYLLHWELLNFLLITMSTQLLAGPSPGPNDLNPFIDASMAQESTLVIAVVRKLLLNYITQSSIPLNNISYSVFSEVSQPGVIQRVGSAAANFVLLPFSYLVNSSGGGSTSPLADSSVHVLLILIHYHKYVVGKETIMERNDDIATTDSILKGNMYFSDNPYSKALENASDIEFDRTGLEENVHNGPVVILPFASLFDTFGIRLADEAAVLLLYSLLQGNADFLEYVLVRTDLDTVLTPILEALYNASRRSSNQIYMLLIILLILSQDSSFNASIHKLILPAVPWYKERLLHQTSLGSLMVIILIRTVQFNLSKLRDIYLHTTCLATLANMAPHVHRLSSYASQRLVSLFDMLSRKYSKLGVLKDDNMHDAKRSSIEGNSLTDDMSTELHIYTDFLRLVLEILNSILTYALPRNPEFIYAVIHRQEVFQPFKNHPRFNELIENIFTVLDFFNSRIDAQRLDGELSVEKVLQVIIINCRSWRGEGLKMFTQLRFTYEQESRPEEFFIPYVWQLVLSRCGFTFNSGAINLFPADPIAEEAGVVARNRSPLSSALLLRPDLAKTISAAATCEMDYRRRELYKLVFLFLVSLFGRIQSLSVTVNQEECVFEYVFHDGDKVSGNFVVVDHDIYWGSDHPGIDFTVKSTAGNLVKSIKGSTGEKFEFDAPRSGMYKFCFHNPTTTPETVSFYIHIGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRLSTWLLSLNILLSISPLLHLLHNAYMAVLQSVAKCPDALRSPHSEAVSALKDGFLPRHFGSVHPGSVTVNLGSGGTLAYSLDRQNPFLPRLFAVVDDIFCLFQGHIENVALLKQQYGLNKTANEVIIAIEAYRTLRDRGPYPADQVVRDIVGKYAFILYDSSCKTTFFASDVDGSVPFFWGTDSEGHLVLSDDAEIVKKGCGKSFAPFPKGCFYTSSGGLRSFEHPLNELKPVPRVDSSGQVCGATFKVDSEVRKESSGMPRVDSAANWSSNY 1178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2918956 2936054 + BLOR18165 Blo07g00233 62757

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00233 1178 PANTHER DYMECLIN 1 703 IPR019142 -
Blo07g00233 1178 ProSiteProfiles GOLD domain profile. 771 858 IPR009038 -
Blo07g00233 1178 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 771 866 IPR036598 -
Blo07g00233 1178 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 983 1129 IPR029055 -
Blo07g00233 1178 Coils Coil 880 900 - -
Blo07g00233 1178 Pfam Aluminium induced protein 935 1154 IPR024286 -
Blo07g00233 1178 CDD Wali7 935 1154 - -
Blo07g00233 1178 Pfam emp24/gp25L/p24 family/GOLD 767 905 IPR009038 -
Blo07g00233 1178 SMART DUF3700_2 931 1154 IPR024286 -
Blo07g00233 1178 SMART EMP24_GP25L_2 763 928 IPR009038 -
Blo07g00233 1178 Pfam Dyggve-Melchior-Clausen syndrome protein 1 681 - -
Blo07g00233 1178 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 997 1126 IPR029055 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00233 K23951 DYM; dymeclin - qsu:112016408 1073.92
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00623 Blo-Chr4:5453827 Blo07g00233 Blo-Chr7:2918956 3.33E-24 dispersed
Blo07g00208 Blo-Chr7:2651634 Blo07g00233 Blo-Chr7:2918956 3.03E-56 dispersed
Blo07g00233 Blo-Chr7:2918956 Blo14g00384 Blo-Chr14:4181934 9.25E-63 dispersed
Blo13g00441 Blo-Chr13:24717804 Blo07g00233 Blo-Chr7:2918956 1.42E-23 dispersed
Blo17g00240 Blo-Chr17:2412250 Blo07g00233 Blo-Chr7:2918956 9.32E-34 dispersed
Blo01g00110 Blo-Chr1:1524844 Blo07g00233 Blo-Chr7:2918956 1.65E-64 wgd
Blo12g00342 Blo-Chr12:19297851 Blo07g00233 Blo-Chr7:2918956 3.37E-47 wgd
Blo02g00590 Blo-Chr2:11165995 Blo07g00233 Blo-Chr7:2918956 3.09E-158 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g558 . . . . . . . . . . . Cma14g01746 Car06g01186 Car14g01575 Sed02g1343 Cpe08g00285 Cpe03g01466 Bhi01g00759 Tan10g0790 Cmetu06g0219 . Hepe05g1587 . Lcy11g1583 . . . . . . . . . Cone7ag0280 Cone4ag0272 Lsi05g01638 . . Cme06g00574 . Blo07g00233 Bda11g00598 . . Bpe13g00586 . Bma06g01571 . Cmo06g01383 Cmo14g01783 . . . . . . . . . . . . . Cla05g00508 Cam05g0559 Cec05g0571 Cco05g0569 Clacu05g0556 Cmu05g0527 Cre05g0596 . Csa03g01290 Chy06g00544 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006298 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00233 Blo_Chr07 FPKM 13.963326 16.139284 26.210449 27.664064 20.033497 18.127344 23.127388 20.483625 19.01527 19.796881