Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00235 ATGAAAGAGAGCTCGGAGCAGCACCTTGTAATCAAAACCCATTTCCAAGACTCCATGAATCCCCCTCAGAAAGCTCCAAAAACCGCCCAGAACGGTAAAGGTCCGCCCCACAACGAAACCCACAACGGTAAGTGTCAAAACCAAGCTTCTCCACCGACGAAAATCAAGGGAAGAAGAAGGGGAAGAGGCGGCAGGAAATCAGACCAGAGCGACGTTTATCTCCGGCCAAGCTCCCGTCACTGTACAGTGGTGCATAAACCGGTTACGCCGGAGCCGCCAGACGGTGGCAACTTGTGTGAAACGGCGATGGGTTTTCCTAGTTCAACCAAAGCTTTAAATTTTACTCCTAGGCCCGGGCAAGGGCAGACTGGAACGAAGTGTATCGTAAAGGCCAACCATTTTTTTGCAGAATTACCAGAAAAAGACTTGAATCAATATGATGTTAGTATAACTCCTGAAGTTGCATCAAGAACTGTAAACAGAGCTATAATGGCGGAACTGGTTAGATTATATAAAGCTTCTGAATTGGGAATGAGATTACCTGCTTACGATGGAAGAAAGAGTTTATACACAGCTGGGGAGCTTCCCTTTGTTTGGAAAGAGTTTGATATTAAGCTGATTGATGAAGAAGATGGAATCAATGGTCCCAAGAGGGTAAGGCTATACAAAGTCGTTATTAAATTTGTAGCTCGTGCCAATTTGCATCATCTCGGCCAGTTCTTAGCTGGTCGGCGAGCAGACGCCCCTCAAGAAGCTTTGCAAATACTCGACATTGTATTAAGGGAGCTATCGATCAAAAGGTTGTGCCCCGTGGGAAGGTCCTTTTTTTCACCGAATATTAGATCGCCTCAGCGCCTTGGCGATGGCTTAGAATCATGGTGTGGGTTTTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCACTGAATATTGACATGGCATCGGCTGCATTTATCGAACCTCTCCCGGTACTTGAGTTTGTCGGCCAGCTTCTCAGCAAGGACGTTCTGTCAAGGCCATTGTCTGATTCCGATCGTGTGAAGATCAAGAAGGCCTTGAGAGGAGTGAAAGTCGAAGTCACCCACAGAGGAAATGTTCGAAGAAAGTATCGTGTTTCGGGATTGACATCTCAGCCAACCCGAGAACTCATATTCCCAGTAGATGACAACTCAACGATGAAGTCGGTCGTTGAATACTTCCAGGAGATGTATGGATTCACCATTCAACATGCACATCTCCCTTGTCTTCAAGTAGGAAATCAGAAGAAGGCCAATTATTTGCCAATGGAGGCCTGCAAAATTGTTGAAGGTCAACGGTATACGAAAAGATTAAACGAGAAACAGATCACTGCCCTCCTAAAAGTTACCTGCCAAAGACCGAGGGACCGAGAAAATGACATTCTTCAGACTGTTCAACATAATAACTATGATCAAGATCCTTACGCCAAGGAGTTTGGTATCAAAATCAGTGAGAAAATGGCTTCTGTCGAGGCTCGAATACTTCCTGCTCCTTGGCTTAAATATCACGAGACCGGCAAGGAAAAGGATTGTTTGCCTCAAGTAGGCCAATGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTCAGTCGATGGGCATGCATTAACTTCTCGAGGAGCGTGCAAGAAAGCGTGGCTCGTGGATTTTGTAACGAACTGGCTCAAATGTGTCAAGTCTCCGGAATGGAATTTAATCCGGAACCTGTCATTCCAATATACAATGCTCGGCCCGAGCAAGTGGAGAGATCATTGAAGCATGTTTTACATGCTTCTATGAACAAAACTAAAGGAAAAGAGTTAGAGCTATTACTGGCTATTTTACCCGACAACAACGGATCCCTCTATGGTGATCTCAAGCGAATTTGCGAGACAGATCTTGGCTTGATATCACAATGTTGTCTTACAAAACACGTGTTTAAGATCAGCAAACAATACTTAGCAAACGTGTCGTTGAAGATCAATGTCAAGATGGGAGGTAGAAACACTGTTCTTCTTGACGCCATCAGCTGCAGAATACCTTTAGTCAGTGACATACCAACCATAATATTCGGAGCTGACGTGACTCACCCAGAAAACGGAGAAGATTCTAGCCCTTCCATAGCTGCTGTAGTAGCCTCACAGGATTGGCCAGAAGTTACCAAATATGCCGGACTGGTTTGTGCTCAAGCCCACCGACAAGAACTCATTCAAGACTTGTACAAAACTTGGCACGAACCCGTCCGAGGTGCAGTTAGCGGTGGCATGATCAGAGACCTTCTGGTATCGTTCAGGAAGGCAACGGGCCAGAAGCCGTTGAGGATTATATTTTACAGGGACGGAGTGAGCGAGGGCCAGTTTTATCAAGTCTTACTTTACGAGCTAGACGCAATCAGGAAGGCTTGTGCATCGTTAGAACCAAATTATCAACCGCCCGTCACTTTTATAGTCGTGCAAAAACGACACCATACTCGTTTTTTTCCCAACAATCATAGAGACCGGAGCAGCACCGACAAGAGCGGGAATATTTTGCCAGGAACTGTGGTTGATTCCAAGATATGTCATCCTACCGAATTCGATTTCTACCTTTGCAGCCATGCTGGTATCCAGGGGACGAGTCGGCCGGCTCATTACCATGTTCTTTGGGACGAGAACAATTTTACGGCCGATGGGATTCAGTCGCTGACGAACAATCTATGTTACACTTACGCGAGGTGTACTCGATCCGTTTCTGTTGTTCCTCCGGCGTATTATGCGCATCTAGCTGCTTTTCGAGCACGATTTTACTTGGAACCGGAGATGCAAGACAACAACTCGACTAATCAATCGACCAAAATGACTCGGCCGGTAGGAGAGTCAGGAGTTCGACCATTGCCGGCTTTGAAGGAGAACGTAAAGAGAGTCATGTTTTATTGCTAA 2919 45.7 MKESSEQHLVIKTHFQDSMNPPQKAPKTAQNGKGPPHNETHNGKCQNQASPPTKIKGRRRGRGGRKSDQSDVYLRPSSRHCTVVHKPVTPEPPDGGNLCETAMGFPSSTKALNFTPRPGQGQTGTKCIVKANHFFAELPEKDLNQYDVSITPEVASRTVNRAIMAELVRLYKASELGMRLPAYDGRKSLYTAGELPFVWKEFDIKLIDEEDGINGPKRVRLYKVVIKFVARANLHHLGQFLAGRRADAPQEALQILDIVLRELSIKRLCPVGRSFFSPNIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVGQLLSKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELIFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNNYDQDPYAKEFGIKISEKMASVEARILPAPWLKYHETGKEKDCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPVIPIYNARPEQVERSLKHVLHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHEPVRGAVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRFFPNNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPEMQDNNSTNQSTKMTRPVGESGVRPLPALKENVKRVMFYC 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2953226 2958047 - BLOR18167 Blo07g00235 62759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00235 972 SUPERFAMILY PAZ domain 316 477 IPR036085 GO:0005515
Blo07g00235 972 Pfam Mid domain of argonaute 519 595 IPR032473 -
Blo07g00235 972 SMART PAZ_2_a_3 322 458 IPR003100 GO:0005515
Blo07g00235 972 SMART Piwi_a_2 610 931 IPR003165 GO:0003676
Blo07g00235 972 Pfam N-terminal domain of argonaute 126 260 IPR032474 -
Blo07g00235 972 ProSiteProfiles Piwi domain profile. 610 931 IPR003165 GO:0003676
Blo07g00235 972 Gene3D paz domain 315 440 - -
Blo07g00235 972 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 971 - -
Blo07g00235 972 MobiDBLite consensus disorder prediction 1 77 - -
Blo07g00235 972 Pfam Piwi domain 611 929 IPR003165 GO:0003676
Blo07g00235 972 SUPERFAMILY Ribonuclease H-like 599 931 IPR012337 -
Blo07g00235 972 Pfam PAZ domain 348 452 IPR003100 GO:0005515
Blo07g00235 972 Pfam Argonaute linker 2 domain 462 508 IPR032472 -
Blo07g00235 972 Gene3D - 679 972 IPR036397 GO:0003676
Blo07g00235 972 PANTHER PROTEIN ARGONAUTE 10 55 971 - -
Blo07g00235 972 MobiDBLite consensus disorder prediction 11 53 - -
Blo07g00235 972 CDD Piwi_ago-like 480 930 IPR045246 -
Blo07g00235 972 ProSiteProfiles PAZ domain profile. 322 436 IPR003100 GO:0005515
Blo07g00235 972 Pfam Argonaute linker 1 domain 270 319 IPR014811 -
Blo07g00235 972 Gene3D - 500 673 - -
Blo07g00235 972 CDD PAZ_argonaute_like 321 435 - -
Blo07g00235 972 SMART DUF1785_2 269 321 IPR014811 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00591 Blo07g00235 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00235 Blo-Chr7:2953226 Blo11g00190 Blo-Chr11:1501109 8.87E-144 dispersed
Blo01g01233 Blo-Chr1:46585136 Blo07g00235 Blo-Chr7:2953226 8.06E-54 transposed
Blo03g01067 Blo-Chr3:37048208 Blo07g00235 Blo-Chr7:2953226 0 transposed
Blo06g00918 Blo-Chr6:32438208 Blo07g00235 Blo-Chr7:2953226 0 transposed
Blo13g00109 Blo-Chr13:2042432 Blo07g00235 Blo-Chr7:2953226 0 transposed
Blo02g00591 Blo-Chr2:11306131 Blo07g00235 Blo-Chr7:2953226 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00235 K11593 - pvy:116141441 1795.4