Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00287 ATGCTGGGCTTAGAACTTGATTTTTTTCTTCTTTATTCAGCTTCTAATAAAGAGACAGTTCTTTTTCCTACTGATTGTAAAGATGAAGACTATGGAAAATGCCCAATCACCGGAGAATCACTCACCATGGATGATGTTGTTCCAATTAAAACTGGCAAGATAGTAAAGCCCAGACCTGTTCAAGCTGCTAGCATTCCTGGCATGTTAGGAATGTTCCAGAATGAATGGGATGGATTGATGCTATCTAATTTTGCACTTGAACAACAATTGCATACGGCTAGACAAGAGCTTAGCCATGCCTTGTACCAGCATGATGCTGCATGTCGAGTGATCGCCAGACTAAAAAAAGAAAGGGATGAAGCTAGGTCAATACTTGCTCAAGCTGAAAGGCAAATGCCCGTTGTAGCATCAGCACCAGTTGTAAATGCTTCTGTTCATAGCAACGGGAAAAGAGGCGCTGAAGATGAAGAGTTGGGCCCTGATGGAAAAAGAATGCGCCAGGGAATAACTACTAGTATCATCTCTGAGCTTACAGAGTGTAATGCTGCACTTTCACAGCAGCGGAAGAAGCGACAAATACCAGCAACTTTGGCTCCTGTTGATCGTTTGGAGGGGTATACCCAGATATCTAGCCATCCTCTCCATAAAACAAGCAAACCAGGCATTTTATCTCTCGACATTCATTACAGCAAGGACTTAGTTGCTACTGGTGGGCTTGACTCCAATGCTGTAATTTTTGATCGATCTTCAGGACAGATTTTATCAACACTTTCTGGTCATTCTAAGAAGGTGACTGGTGTAAAGTTTGTGGCGCAAGATGCATTATTCTTGACTGGTTCGGCTGATAAGACTGTTCGCATTTGGCAAGGCTCTGATGATGGGAACTATGATTGTAGGCATATCTTAAAAGATCATACTGCTGAGGTCCAAGCAGTTACTGTTCATGCTACAAACAACTACTTTGTGACCGCGTCGCTTGATAACACATGGTGCTTTTATGAAATTGCTTCTGGATTATGTCTAGCACAGGTTGCAGACACTTCAGGAACGGAGGGCTACACATCAGCAGCCTTTCATCCTGACGGTCTTATCCTTGGAACAGGTACATCTGAGGCTCTTGTTAAGATTTGGGATGTTAAAAGTCAGACAAATGTTGCCAGATTTGATGGACATGTTGGAGCTGTAACTGCAATTTCTTTTTCAGAAAATGGTTACTTCCTTGCGACTGCTGCTCGAGATGGTGTAAAGCTGTGGGATCTACGCAAATTGAAGAACTTCCGGACATTTTCTCCATATGATTCAGATACACCAGCAAACTCTGTTGAATTTGACCAAAGTGGAAGTTACCTTGCAATTGCAGGATCAGATATAAGGGTTTACCAAGTTGCAAGCGTGAAATCTGAATGGAATTGTATCAAGACCATTCCAGATTTGTCTGGAACAAGTAAATCAACGTGCATCAAGTTCGGTCCAGATGCAAAATACTTAGCAGTAGGATCAATGGATCGAAACCTCCGGATATTTGGTTTGACCGAGGAAGATGATTTTGTTCGCGTTCCCCACACTCTTCTCACTGCAAATGAGGGAATCTCTGTCTGCAAGCTCCTCCCATTCGCTGAATCTGGGTCTGACTACACTACCTTGGTCTATAAGGGGTGTGCGAAGCAAGCTTTTTCAGATCCAACGGGTGTCTACTCTCAAGCGCTCTCGGCGCTGTTTGGGTCTTTGATTTCTCAGTCCACCAAGTCTAAGTTTTACAAGACTAGCTCTGGAAGTGGGCAAACCTCCATTGACGGTCTCTTCCAATGCAGAGGGGACCTCAGCAACTCCGACTGCTACAACTGTGTGAGCCAGCTCCCAGAAATTGCAGATAAACTATGTGGCAAAACCATTGCTGCTAGAGTTCAACTAACTGGCTGCTACTTGCTTTACGAGGTTTCTGGGTTTGACCAGATTTCAGGGTTTCAAATGCTCTTCAAAACTTGTGGGGCCACTAATGTGGCCGGAAGTGGGTTTGAAGAACGAAGAGATGCAGCCCTTTCTGTTTTGGAGAACGGTGTCGTGAGTGGCCATGGGTTTTACACGACGAGCTATGAATCGGTCTATATGTTGGCGCAGTGCGAAGGAGATTTGGGAGATTCAGATTGTGGGGAGTGTGTGAAAAGTGCCGTCCAAAAAGCTCAGGTTGAATGCGGGAGCTCTATTTCCGGCCAAGTCTACCTGCATCGATGCTTTATTAGTTACAGTTACTATCCTAATGGGGTTCCCAGGAGATCGTCGTCCTCATCATCATCTTCAGATTCTTCATCGTCTTCAGCACATAATGACTCAGAATATTTGGGAACAGGGGGTACTACAGGGAAGACTGTTGCAATTATATTAGGAGGGGCTGCAGGAGTGGGGTTTCTAGTCATTTGCTTGCTGTTTGCTAGAAATTTGCTGAGAAAACACGATGGTGAGTGTAAATAA 2469 44.27 MLGLELDFFLLYSASNKETVLFPTDCKDEDYGKCPITGESLTMDDVVPIKTGKIVKPRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSILAQAERQMPVVASAPVVNASVHSNGKRGAEDEELGPDGKRMRQGITTSIISELTECNAALSQQRKKRQIPATLAPVDRLEGYTQISSHPLHKTSKPGILSLDIHYSKDLVATGGLDSNAVIFDRSSGQILSTLSGHSKKVTGVKFVAQDALFLTGSADKTVRIWQGSDDGNYDCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYEIASGLCLAQVADTSGTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQTNVARFDGHVGAVTAISFSENGYFLATAARDGVKLWDLRKLKNFRTFSPYDSDTPANSVEFDQSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDLSGTSKSTCIKFGPDAKYLAVGSMDRNLRIFGLTEEDDFVRVPHTLLTANEGISVCKLLPFAESGSDYTTLVYKGCAKQAFSDPTGVYSQALSALFGSLISQSTKSKFYKTSSGSGQTSIDGLFQCRGDLSNSDCYNCVSQLPEIADKLCGKTIAARVQLTGCYLLYEVSGFDQISGFQMLFKTCGATNVAGSGFEERRDAALSVLENGVVSGHGFYTTSYESVYMLAQCEGDLGDSDCGECVKSAVQKAQVECGSSISGQVYLHRCFISYSYYPNGVPRRSSSSSSSSDSSSSSAHNDSEYLGTGGTTGKTVAIILGGAAGVGFLVICLLFARNLLRKHDGECK 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3350530 3358653 + BLOR18219 Blo07g00287 62811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00287 822 ProSiteProfiles Trp-Asp (WD) repeats profile. 388 428 IPR001680 GO:0005515
Blo07g00287 822 MobiDBLite consensus disorder prediction 145 164 - -
Blo07g00287 822 MobiDBLite consensus disorder prediction 149 163 - -
Blo07g00287 822 SUPERFAMILY WD40 repeat-like 218 508 IPR036322 GO:0005515
Blo07g00287 822 SMART WD40_4 250 289 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 381 419 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 205 247 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 295 334 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 468 509 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 422 461 IPR001680 GO:0005515
Blo07g00287 822 SMART WD40_4 337 378 IPR001680 GO:0005515
Blo07g00287 822 Pfam WD domain, G-beta repeat 471 508 IPR001680 GO:0005515
Blo07g00287 822 Pfam WD domain, G-beta repeat 251 288 IPR001680 GO:0005515
Blo07g00287 822 Pfam WD domain, G-beta repeat 384 418 IPR001680 GO:0005515
Blo07g00287 822 MobiDBLite consensus disorder prediction 759 780 - -
Blo07g00287 822 Coils Coil 111 131 - -
Blo07g00287 822 Gene3D - 655 752 IPR038408 -
Blo07g00287 822 Gene3D - 545 649 IPR038408 -
Blo07g00287 822 Pfam Salt stress response/antifungal 666 750 IPR002902 -
Blo07g00287 822 Pfam Salt stress response/antifungal 557 645 IPR002902 -
Blo07g00287 822 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 257 289 - -
Blo07g00287 822 Gene3D - 198 510 IPR015943 GO:0005515
Blo07g00287 822 ProSiteProfiles Trp-Asp (WD) repeats profile. 346 387 IPR001680 GO:0005515
Blo07g00287 822 ProSiteProfiles Gnk2-homologous domain profile. 546 649 IPR002902 -
Blo07g00287 822 Pfam Prp19/Pso4-like 62 127 IPR013915 -
Blo07g00287 822 ProSiteProfiles Gnk2-homologous domain profile. 654 753 IPR002902 -
Blo07g00287 822 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 289 IPR001680 GO:0005515
Blo07g00287 822 CDD WD40 221 508 - -
Blo07g00287 822 PANTHER PRE-MRNA-PROCESSING FACTOR 19 29 511 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00771 Blo07g00287 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00287 Blo-Chr7:3350530 Blo10g00282 Blo-Chr10:4075343 6.24E-49 dispersed
Blo02g00771 Blo-Chr2:26049284 Blo07g00287 Blo-Chr7:3350530 1.46E-112 transposed
Blo13g00939 Blo-Chr13:31827783 Blo07g00287 Blo-Chr7:3350530 1.78E-10 transposed
Blo10g00634 Blo-Chr10:19545549 Blo07g00287 Blo-Chr7:3350530 1.58E-100 wgd
Blo02g00770 Blo-Chr2:25991592 Blo07g00287 Blo-Chr7:3350530 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00287 K10599 - vvi:100249408 847.81