Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00289 ATGGGAGGTGGGTCTGCAACTGCACGCAAGGTTATGGTGGTAGCAGACCCAACAAGAGAATCTGCAGCCGCCCTGCAATACGCTCTTTCCCATGCCGTGCTCGAGCGCGACGAGCTTATTCTCCTTCACGTCGACAACCCCAATTCATGGCGTCACACATTCTCCACTTTCCTCAAAAGGCCGACTTACCCAGCCTCTTCCACGTCGACGGCGTCCGAGGGCTCGGGCGGGGACGTCGATTTTCTCGAAGAGATGAAGAATGCTTGCAGAGCCACGCAGCCGAAAGTCCAGGTACGCCTGGTGAGAATGGAGGTGGACGGCAAAGACAAAGCAAGCACCATTATAGCACAGACCAAGGAGGTCGGAGTAGATCTACTAGTTGTAGGACAGAGGAGGAGTCTCTCCAATGCATTATTAGGATATAGGCGGCCTGGAGTGGCGATGAAAATGTTTGACACGGCGGAGTACTTGATCGAGAACAGCACGTGCACCTGCGTTAGCGTACAGAAAAAGGTTACATCGCCTTTCTCTCAGCCGCCTACCAATTCAAGCCCAACTTCCACTTCCGTGAGCGAATTCTTCACCTCTCATTTCGTCAGACGCATGGCTTCCCCTGCCATTGCTCCAGCTTCTACTTCCTTCACCGTCAACAAGAAAGATCTCAATCTCTCTGCTATTACTCTCTCTTCATCATTTTCGTCTCAGCGATGCGGAAGAACGGTTTCCAAGAAAATTGTTTCGGTTATGGCACCTCAACAAATGGAACGCAAGCCCTCCGCCACTGGCTCAGCTGGGTTTCTTTTCGTCAAGACGGCGATGACAATGACGGAAAAGATATTGGCTAGAGCTTCTGAGAAACCACACTTAAGCCCTGGGGAAAACGTTTGGGTTAATGTTGATGTTTTAATGACTCACGATGTTTGTGGTCCTGGTTCTATAGGAATTTTCAAAAAGGAATTTGGCGAGAATGCCAAGGTATGGGATCGGGAGAAGATTGTAATTATTCCTGACCATTATATCTTTACTAGTGATGAACGGGCAAACCGCAACGTAGACATTCTTAGGGATTTTTGCACGGAGCAGAACATTAAGTACTTTTATGACATTAAAGATCTTAGTAATTTTAAGGTAAACCCAGACTACAAAGGCGTCTGCCATATTGGTCTTGCTCAAGAAGGCCATTGCAGGCCGGGAGAGGTCTTGCTTGGTACAGACTCTCATACTTGTACTGCTGGAGCATTTGGCCAGTTTTCAACCGGAATTGGTAATACTGATGCAGGATTTGTGTTAGGAACTGGGAAATCCCTTCTCAAGGTCCCTCCAACCTTGAGATTTGTCATGGATGGTGAAATGCCTGACTTTTTGCTAGCCAAAGATTTGATTTTGCAAATTATTGGTGAAATATCTTTGTCTGGAGCTACATACAAAGCTATGGAGTTTGTTGGCACAGTGGTTGAAAGATTAAGTATGGAAGAGAGGATGACATTATGCAACATGGTTGTCGAAGCTGGAGGAAAGAATGGTGTTGTCCCTCCAGATTCTACTACATACAAATATCTGGAGGATAAGACATCTGCAGACTATGAACCAGTATACAGTGATGGAAATGCAAGGTTTCTTTCTGAGTATAGATTCGATGTTTCAAAGCTGGAACCTTTGGTGGCTAAGCCCCATTCCCCAGATAACCGGGCATTGGCAAGGGAATGCAAAGATGTGAAAATTGACAGGGTATATGTAGGATCTTGCACTGGAGGAAAAACAGAGGACTTTCTTGCTGCCGCTAGAGTTTTTCTTGCAGCAGCTGGAAAGAAGGTGAAAGTTCCAACATTTCTCGTCCCCGCAACCCAAAAGGTATGGATGGATTTGTATAGTATTCCGGTACCTGGGGCGGGCGGGAAAACTTGTTCCCAGATATTCGAAGAAGCTGGATGTGACACTCCTGCCAGTCCTGGTTGTGGTGCTTGTTTAGGGGGCCCTAAAGACACTTATGCACGAATGAACGAAGCTAAGGCAACTCATCTTTTTTACCCTTCCTTTATGAATCTTTTGATCAATTTATTCTCCTGA 2067 46.49 MGGGSATARKVMVVADPTRESAAALQYALSHAVLERDELILLHVDNPNSWRHTFSTFLKRPTYPASSTSTASEGSGGDVDFLEEMKNACRATQPKVQVRLVRMEVDGKDKASTIIAQTKEVGVDLLVVGQRRSLSNALLGYRRPGVAMKMFDTAEYLIENSTCTCVSVQKKVTSPFSQPPTNSSPTSTSVSEFFTSHFVRRMASPAIAPASTSFTVNKKDLNLSAITLSSSFSSQRCGRTVSKKIVSVMAPQQMERKPSATGSAGFLFVKTAMTMTEKILARASEKPHLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCTEQNIKYFYDIKDLSNFKVNPDYKGVCHIGLAQEGHCRPGEVLLGTDSHTCTAGAFGQFSTGIGNTDAGFVLGTGKSLLKVPPTLRFVMDGEMPDFLLAKDLILQIIGEISLSGATYKAMEFVGTVVERLSMEERMTLCNMVVEAGGKNGVVPPDSTTYKYLEDKTSADYEPVYSDGNARFLSEYRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYVGSCTGGKTEDFLAAARVFLAAAGKKVKVPTFLVPATQKVWMDLYSIPVPGAGGKTCSQIFEEAGCDTPASPGCGACLGGPKDTYARMNEAKATHLFYPSFMNLLINLFS 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3365310 3372658 - BLOR18221 Blo07g00289 62813

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00289 688 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 139 - -
Blo07g00289 688 Gene3D HUPs 5 168 IPR014729 -
Blo07g00289 688 Gene3D Aconitase, domain 3 274 552 IPR015931 -
Blo07g00289 688 Pfam Universal stress protein family 8 167 IPR006016 -
Blo07g00289 688 SUPERFAMILY Aconitase iron-sulfur domain 272 669 IPR036008 -
Blo07g00289 688 Pfam Aconitase family (aconitate hydratase) 293 661 IPR001030 -
Blo07g00289 688 Gene3D Aconitase, domain 3 555 674 IPR015931 -
Blo07g00289 688 PRINTS Aconitase family signature 644 657 IPR001030 -
Blo07g00289 688 PRINTS Aconitase family signature 472 485 IPR001030 -
Blo07g00289 688 PRINTS Aconitase family signature 486 499 IPR001030 -
Blo07g00289 688 PRINTS Aconitase family signature 410 425 IPR001030 -
Blo07g00289 688 PRINTS Aconitase family signature 396 409 IPR001030 -
Blo07g00289 688 CDD USP_Like 10 163 - -
Blo07g00289 688 PANTHER DEHYDRATASE, PUTATIVE-RELATED 178 669 - -
Blo07g00289 688 PANTHER HOMOACONITASE, MITOCHONDRIAL-RELATED 178 669 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00289 K01703 leuC, IPMI-L; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] - zju:107410237 825.083
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00289 Blo-Chr7:3365310 Blo15g00493 Blo-Chr15:8236508 7.38E-15 dispersed
Blo07g00289 Blo-Chr7:3365310 Blo16g00161 Blo-Chr16:3688367 4.30E-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g789 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag0354 Cone4ag0366 . . . . . Blo07g00289 Bda11g00650 . . Bpe13g00536 . Bma06g01618 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 1 1 1 2 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00289 Blo_Chr07 FPKM 11.603826 12.820638 8.674126 10.158072 6.518987 5.577992 6.506818 22.155695 23.602118 20.940363