Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00296 ATGTTTGTGATCCTAACGCAAATACTGGTCCTGGCAGCCAAGAGACGCATACCCACTACACTGGAAGGCCCTTTCAAGCCCGTCACTCGCCGCTTTGATCCGTTGCTACGGCGAGGCAGCGACGATCTTCCCATGGACAGCCCCAGACTGAAGAAAAACGTCACCTCCAACTTCCCAGAACAGATAGCTCTCGCCATTTCTACTCCCACCTCGATGTGGGTCTCTTGGGCGACGGGTACTGATTTCCATGATTCTGAGTACTTGGTTTTGATTTTGTTCGTCATCATTCTGAGTGCTCAGTTGGCTACGACTGCTTCAGGGGACGCTCAGATTGGTTGCGATGTGACTCCTCTCGATCCTTCATCGGTTGCGAGCGAGGTTTGGTACGGGAAACAAAGTGGCAACTATACCAGTAGAAGAAGAGGATTTTCCTCGGTTTACAGCCAGTTATACCCATATGAACGCCTACTAAATTACACATCCCCCATCATTCACCATGTCAGGATTGACGGTCTTGAGCCTGGATCCAAGTATTATTATAGATGTGGAGATAGCTCTCTTTCGGCTATGAGCGAAGAACTTGCCTTTGAAACACTTCCAAAACCAAGCTCCACCTCATATCCTCGCAGAATAGCAGTAGTTGGAGATCTGGGTCTCACCAGCAACTCGACCAAAACCGTAGATCACTTGGCTCAGAATGACCCTTCACTGATTCTAATGGTGGGGGACTTGAGCTATGCAAATCAGTACCTCACCACTGGAGGCAAAGGAGCTCCATGTTACTCGTGTGCATTTCCTGATACGCCTATCAGAGAGACGTATCAGCCTCGTTGGGATGGATGGGGCAGGTTCATGGAGCCGCTTGTATCCAGAGTTCCTATGATGGTGATTGAGGGAAATCATGAGATTGAGCCTCAAATTTCTGGGATCACATTCAAATCATACGCAACAAGATTTGCTGTTCCCTCCAATGAATCGGGCTCGACCAGTAACTTTTACTACTCTTTTGATGCCGGAGGGGTACATTTTCTCATGCTAGGTGCATACGTCGATTACAATGCCACCGGAGCTCAGTACGCATGGCTGAAGGAAGATTTAAAAAGAGTGGATCGCAATGTGACCCCTTGGGTGGTAGCTGCATGGCATCCACCCTGGTATAACAGCTACTCTTCTCACTATCAGGAATTTGAATGCATGAGACAAGAGATGGAAGAAATTCTATTCCACCATAACATCGATATTGTCTTTTCTGGTCACGTGCATGCCTATGAGAGGATGAACAGAGTCTATAATTATACGATAGATCCTTGTGGGCCAGTGTACATAACAGTTGGAGACGGTGGAAATATTGAGAAAGTGGATGTAGATCATGCAGATGATCCTGGAAGGTGCCCTTCTCCGACGGACAACATACCGGAATATGGAGGGCAGTGCAGCGTTAATTTCTCTTCTCCAGGTGCAAAGGGAAAGTTTTGCTGGGACAGACAACCAGAATGGAGTGCTTTCAGAGAAAGCAGCTTTGGGCATGGAATCCTCGAGGACTCTATGTTGGATCAAGTGGAATTATCTTTGAATTCTATTATTGGATTAACTCATTCACGATCTATGCGATTATGGGGCAGCGTTAAGAAGAGGCAAGTAATAATTCTAATTGATGCTATCTTGGAATGTAGGTCTCCAACATCCATTCGACAATTACATGGATTTCTCGGTTTGACAAGTTATTATCGTAAATTTGTCTCGGGTTATGACAGTATTGCATTACCACTAACAGAACAATTAAAAAAAGATCAGTTTTGTTGGTCAGAGGAAGCTGAAATAGCCTTTCAGGAATTGAAAATCGCTATGAGTTCATTACCTGTTTTAGCTATACAGAATTTTAAAGAAACATTCGTAGTGGACACAGATGCATCAGGCAATGGAGTGAGTGCTGTTCTTATGCAAAATCAAAAGTCGATTGCTTATTTTAGTCAACAATTGTCCAAACAAAAGCGCCTAAAGTCGACTTATGAAAGAGAGTTGATGGCTATAGTTTTAGCAGTGCAAAAATGGCGGCCTTATTTGTTGGGTACCCATTTTATTGTTCGCACTGATCAGAAAAGTCTCAAATTTTTATTGGAGCATCGCATGGTATCTGTTGAGCATAAAAAATGGTTAACTAAATTGCTGGGCTACGATTTTGAAGTTCATTATAAGCCAGGAGGTGAAAATACTGCAGCGGATGCTTTATCACAAAAGGATATGAGTTCTAAGGAATCTATACATTTATTGTCACTTTTCTGCCAAGGTGTTATTAATTCGAATGATTTGGAAATGGAAATTGCCGCTGATGTCACATTGAATACTCTGAAGGAGCAATTGATGTTCACAGGTGGTGCACCACCAGGGTACAAACTTTTTAATGATCAACTATATTACAAGGATCGAAAAGTGTTGTCTCGCCATTTGAGATTTATTCCTCAAATTTTAGCCCTCTTTCATTCTAGTCCAGTGGGGGCCCATGCTGGCATTGGCAAGACACTTAGACGTATAGCTTCTGAATTATATTGGGTCGGTATGCGACAAGACATTAAACAGTTTGTTAATTGTTGTGTTGTGTGTCAGCGCAATAAATATGAGGCTTTATCCCCGGTAGGTTTACTTCAACCTTTATCCATTTCCCAAGATATATGGGAAGACATTTCAATGGATTTTATTGACAAGTTGCTCAAATCAGACCGCATGGATACTATCTTTGTTGTGGTGGACAAGTTAAGTAAATATGCTTATTTTATAGGGTTGAAACACCCTTACAATGCCCATACAGTAGTTGTATTGTTTTTCAACAATATTTTCCATTTACATGGCATGCCTAAATCCATTGTTTCCGATAGAGACAAGATTTTCGTAAGTAATTTTTGGAGGGAACTTTTTCGCTTACATGGTACAACTCTGAAATTCAGCTCTGCTTACCACCCACAGACTGACGGACAATCGGAGGTGGTTAATCGTACGATAGAGACTTATTTACGTTGTTTCACGAATGACAAGCCCACAGCATGGTATCGATGGTTACTCTGGGCGGAATTTTGGTATAATTCTTCATATCATTCCGCCATTAAAATGACGCCCTTTAAGGCTGTTTACAAACGAGATCCCCCATCTATTTTACGATATGATATTCCACCTACTTCTACTATATCGGTTGTTGATGCTCAATTACAAGAAAGGGATGATATTTTAGATTTACTCAAAAGTAATTTGTCAAAGGCTCAGGCTAATATGTCCATTGTTGCCAACAAAAAACGTCGTGATGTGGTTTTTCAAGAAGGTGATTATGTTTGGTTGAAACTTCAGCCTTACCGGCAACGTTCTTTAGCTCAGCCCTTATATCTTAAGTTATCTCCAAAATATTATGGCCCGTTTTTGATATTGGAAAAAATTGGCAAGGTTGCGTATAGATTACTGTAG 3450 42.03 MFVILTQILVLAAKRRIPTTLEGPFKPVTRRFDPLLRRGSDDLPMDSPRLKKNVTSNFPEQIALAISTPTSMWVSWATGTDFHDSEYLVLILFVIILSAQLATTASGDAQIGCDVTPLDPSSVASEVWYGKQSGNYTSRRRGFSSVYSQLYPYERLLNYTSPIIHHVRIDGLEPGSKYYYRCGDSSLSAMSEELAFETLPKPSSTSYPRRIAVVGDLGLTSNSTKTVDHLAQNDPSLILMVGDLSYANQYLTTGGKGAPCYSCAFPDTPIRETYQPRWDGWGRFMEPLVSRVPMMVIEGNHEIEPQISGITFKSYATRFAVPSNESGSTSNFYYSFDAGGVHFLMLGAYVDYNATGAQYAWLKEDLKRVDRNVTPWVVAAWHPPWYNSYSSHYQEFECMRQEMEEILFHHNIDIVFSGHVHAYERMNRVYNYTIDPCGPVYITVGDGGNIEKVDVDHADDPGRCPSPTDNIPEYGGQCSVNFSSPGAKGKFCWDRQPEWSAFRESSFGHGILEDSMLDQVELSLNSIIGLTHSRSMRLWGSVKKRQVIILIDAILECRSPTSIRQLHGFLGLTSYYRKFVSGYDSIALPLTEQLKKDQFCWSEEAEIAFQELKIAMSSLPVLAIQNFKETFVVDTDASGNGVSAVLMQNQKSIAYFSQQLSKQKRLKSTYERELMAIVLAVQKWRPYLLGTHFIVRTDQKSLKFLLEHRMVSVEHKKWLTKLLGYDFEVHYKPGGENTAADALSQKDMSSKESIHLLSLFCQGVINSNDLEMEIAADVTLNTLKEQLMFTGGAPPGYKLFNDQLYYKDRKVLSRHLRFIPQILALFHSSPVGAHAGIGKTLRRIASELYWVGMRQDIKQFVNCCVVCQRNKYEALSPVGLLQPLSISQDIWEDISMDFIDKLLKSDRMDTIFVVVDKLSKYAYFIGLKHPYNAHTVVVLFFNNIFHLHGMPKSIVSDRDKIFVSNFWRELFRLHGTTLKFSSAYHPQTDGQSEVVNRTIETYLRCFTNDKPTAWYRWLLWAEFWYNSSYHSAIKMTPFKAVYKRDPPSILRYDIPPTSTISVVDAQLQERDDILDLLKSNLSKAQANMSIVANKKRRDVVFQEGDYVWLKLQPYRQRSLAQPLYLKLSPKYYGPFLILEKIGKVAYRLL 1149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3423424 3432667 + BLOR18228 Blo07g00296 62820

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00296 1149 Gene3D - 632 696 - -
Blo07g00296 1149 Pfam Iron/zinc purple acid phosphatase-like protein C 438 513 IPR025733 -
Blo07g00296 1149 Pfam RNase H-like domain found in reverse transcriptase 601 695 IPR041577 -
Blo07g00296 1149 SUPERFAMILY Purple acid phosphatase, N-terminal domain 39 200 IPR008963 GO:0003993|GO:0046872
Blo07g00296 1149 Gene3D - 58 201 - -
Blo07g00296 1149 Gene3D - 204 466 IPR029052 -
Blo07g00296 1149 Gene3D - 551 631 IPR043128 -
Blo07g00296 1149 PANTHER ACID PHOSPHATASE RELATED 7 87 IPR039331 GO:0003993
Blo07g00296 1149 PANTHER ACID PHOSPHATASE RELATED 111 513 IPR039331 GO:0003993
Blo07g00296 1149 Pfam Purple acid Phosphatase, N-terminal domain 59 198 IPR015914 GO:0003993|GO:0046872
Blo07g00296 1149 SUPERFAMILY Ribonuclease H-like 886 1039 IPR012337 -
Blo07g00296 1149 PANTHER PURPLE ACID PHOSPHATASE 23 7 87 - -
Blo07g00296 1149 PANTHER PURPLE ACID PHOSPHATASE 23 111 513 - -
Blo07g00296 1149 Pfam Calcineurin-like phosphoesterase 210 423 IPR004843 GO:0016787
Blo07g00296 1149 SUPERFAMILY Metallo-dependent phosphatases 209 514 IPR029052 -
Blo07g00296 1149 SUPERFAMILY DNA/RNA polymerases 550 732 IPR043502 -
Blo07g00296 1149 Pfam Integrase zinc binding domain 819 872 IPR041588 -
Blo07g00296 1149 CDD RNase_HI_RT_Ty3 632 744 - -
Blo07g00296 1149 Gene3D - 789 871 - -
Blo07g00296 1149 Gene3D - 881 1087 IPR036397 GO:0003676
Blo07g00296 1149 CDD MPP_PAPs 205 513 IPR041792 -
Blo07g00296 1149 ProSiteProfiles Integrase catalytic domain profile. 879 1045 IPR001584 GO:0015074
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00296 K22390 ACP7; acid phosphatase type 7 - zju:107422563 839.721
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01443 Blo-Chr1:53333028 Blo07g00296 Blo-Chr7:3423424 1.04E-173 dispersed
Blo03g00139 Blo-Chr3:3894027 Blo07g00296 Blo-Chr7:3423424 5.41E-17 dispersed
Blo07g00296 Blo-Chr7:3423424 Blo17g00768 Blo-Chr17:24500364 3.75E-61 dispersed
Blo15g00576 Blo-Chr15:11989859 Blo07g00296 Blo-Chr7:3423424 5.87E-43 dispersed
Blo17g00449 Blo-Chr17:5601173 Blo07g00296 Blo-Chr7:3423424 2.33E-30 dispersed
Blo04g01252 Blo-Chr4:24688690 Blo07g00296 Blo-Chr7:3423424 3.64E-32 transposed
Blo05g00434 Blo-Chr5:5869513 Blo07g00296 Blo-Chr7:3423424 0 transposed
Blo05g00635 Blo-Chr5:19859014 Blo07g00296 Blo-Chr7:3423424 3.57E-21 transposed
Blo06g00188 Blo-Chr6:7961420 Blo07g00296 Blo-Chr7:3423424 1.74E-53 transposed
Blo07g00851 Blo-Chr7:26862576 Blo07g00296 Blo-Chr7:3423424 9.29E-28 transposed
Blo12g00007 Blo-Chr12:653843 Blo07g00296 Blo-Chr7:3423424 2.75E-48 transposed
Blo14g00698 Blo-Chr14:16312834 Blo07g00296 Blo-Chr7:3423424 8.62E-52 transposed
Blo14g00858 Blo-Chr14:31574337 Blo07g00296 Blo-Chr7:3423424 2.92E-24 transposed
Blo15g00596 Blo-Chr15:13593908 Blo07g00296 Blo-Chr7:3423424 4.20E-06 transposed
Blo10g00677 Blo-Chr10:21734735 Blo07g00296 Blo-Chr7:3423424 7.83E-18 wgd
Blo02g00776 Blo-Chr2:26293124 Blo07g00296 Blo-Chr7:3423424 1.86E-16 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g848 . . . . . . . . . . . Cma14g01873 . Car14g01675 Sed12g0408 . Cpe03g01571 Bhi01g00061 Tan10g0557 Cmetu06g2760 . . . Lcy11g1746 . . . . . . . . . . Cone4ag0384 Lsi05g01814 Csa02g00942 . Cme06g00409 . Blo07g00296 Bda11g00659 . . . . Bma06g01625 . . Cmo14g01919 . . . . . . . . . . . . . Cla05g00371 Cam05g0404 Cec05g0409 Cco05g0409 Clacu05g0399 Cmu05g0384 Cre05g0446 . Csa03g01127 Chy06g00394 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009299 0 5 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00296 Blo_Chr07 FPKM 3.025955 2.416068 1.937323 1.146279 2.017104 2.127193 1.605367 2.895114 2.768548 2.703986