Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00297 ATGTACCAAACCAAAAAAAGCTACACGTGCCAGGCTGCTCCTAAGTTGTTGGGAGGGGCTCTTCAGAAAGCTACTGGCTGGACACGTGATAACCCATCTACCTCATCCTCTGCCCACTTCCAGCCTCCTCCCCTATATAAACTATATACGCTTCCTCCAACAATTGCCCCAACCATTTCCGAGAATCTTAATCAACCACTCCTGCTCACCACAAGTTTCTTCTCTGCTTCTTTCTCCAGCATAAAGCAAGCTATAATGGTGACCGTCGAAGAGGTTCGCAGGGCTCAGCGCGCCGAGGGACCTGCCACCGTCTTAGCCATCGGCACTGCAACGCCCCCTAACTGCGTCGACCAGAGCACTTACCCTGATTACTACTTTCGCATCACCAACAGCGAGCACAAAACCGAACTCAAGGAGAAATTCAAGCGCATGTGCGAGAAATCAATGATCAACAAGCGTTACATGTATTTGACCGAGGAAATATTGAAGGAAAATCCTCAAGTTTGTGCTTACGAGGCCCCCTCGCTGGACGCCAGGCAAGACATGGTGGTGGTGGAAGTGCCGAAGCTGGGTAAAGAAGCAGCCACCAAGGCTATCAAAGAATGGGGCCAACCCAAATCTAAAATCACCCACGTCGTCTTCTGCACCACCAGCGGCGTCGACATGCCCGGAGCGGACTACCAACTCACGAAGCTGCTCGGCCTCCGCCCATCCGTCAAGCGCCTCATGATGTACCAGCAAGGCTGCTTCGCCGGCGGCACTGTCCTTCGACTTGCCAAGGATTTAGCTGAGAATAACAAGGGTGCTCGCGTCCTCGTAGTCTGCTCAGAGATCACCGCTGTCACTTTCCGTGGGCCGAGCGAAACCCACCTCGACAGTCTGGTCGGGCAAGCGTTGTTCGGAGACGGCGCAGCTGCAATTATAATCGGTGCAGACCCAGTCCCATCGGTGGAGAAGCCACTGTTCGAGCTAGTCTCTGCCGCTCAAACCATTCTTCCAGACAGCGACGGAGCGATCGACGGGCATTTACGGGAGGTGGGGCTGACATTTCACCTCCTCAAGGACGTTCCCGGCCTCATTTCCAAGAACGTCGAGAAAAGCCTGGTCGAGGCCTTCAAGCCATTAGGTATCTCGGACTGGAACTCCCTCTTCTGGATAGCCCACCCCGGTGGTCCAGCAATTTTAGACCAAGTGGAAGCGAAGCTGAACCTAGACCCAAAAAAGCTCCGATCCACCAGACACGTTCTGGGGGAGTACGGAAACATGTCAAGCGCGTGTGTGCTGTTTATTCTGGATGAGATGCGAAGAAAGTCGAAGGAAGATGGGCTGAAGACGACGGGGGAAGGGCTGGAGTGGGGCGTGCTATTTGGGTTCGGACCAGCCATTGATGTGTCCAAGTATGCGCATAGCTCAGTGCACAAGGCCATAGCCATGAAGGATTACACAAGTCTCCGAAAAATTCTCAGTGGCCTCCCGAGACTTTGCAATCCATCTGAGATTCAGACAGAAACTGCTTCACTGGCCGAAGAGGAGAAGGCAGATGCGATCTCTGCTGTGATTGATAGACGGGATGTTCCCAATCGAGACACTCCACTTCATGTAGCCGTAAAATTTGGGGATGAAACAGCCACTGAATTGCTTATGGTTGCGGGGGCAGATTGGAGCTTGCAGAATGAACAGGGATGGAGTGCACTCCAAGAGGCAATATGCAATAGAGAAGAACGAATCGCTATGATAATAGTTAGGCATTATCAGCCACTAGCATGGGCAAAATGGTGTAGAAGGTTGCCTCGCTTGGTAGGGACAATGCAAAGAATGCGTGATTTTTACATGGAAATCACTTTTCACTTTGAGAGCTCTGTCATTCCCTTCATTTCAAGGATTGCTCCTTCGGATACTTACAAGATCTGGAAGAGAGGAGCCAATTTGAGGGCAGACATGACCTTAGCTGGTTTTGATGGTTTTCGAATTCAGCGTTCAGACCAGAGTGTTCTTTTTCTTGGCGATGGATCTGAGGATGGGAAGATACCTTCTGGTTCACTATGTATGGTGTCTCACAAGGGAAAGGAGGTGATGAATGCTTTGAATGGGGCTGGTTCTCAAGCGGCTGAAGATGAAGTTAGGCAAGAAGTGGCTGCAATGTCACAGACTAATATATTTAGACCTGGAATTGATGTTACTCAAGCTGTTCTGTTGCCTCAGTTAACTTGGAGACGCCAGGAGAAGACGGAAACGATAGGACCGTGGAAGGGTAAGGTATATGACATGCACAATGTGGTTGTCAGCATCAAATCTAGGCGGGTTCCTGGAGCTATGACAGATGATGAGTTTTTCTCATCTTGTAATGAAAATGAAACAGAAAGTGAGGAACTAGATGACATTTTGACAGAAGAAGAGAAAAGGCAACTTGAAAATGTTCTCAAGTTGGATTCATCTGAGTTGACAGTGGAAAATGGTGAAGGAAATATTGGAAACCACTATAATTGTTATGAGCATAGGGAAATTCCCACTGAAGACACAAATGAATGTATGAATGGGGAGGTCAAGCAGGAAAAGAAAGGATGGTTCAATGGTTGGAGAAAACGGGAATCCAAAACTGAAGGGCAAAAAAAGAATGTTCCTCCAAGAAGCTCCCTTTGTGTAGATGAGAAGGTAAGTGATCTTCTTGGGGAATCTCCTTCAGAGTATCAGAACAAAGCCGGAAGACATTCTGTGGATATTGGGACGCAGGGAGAGGGGCTGCGCAGAGGAAGGGAAGCCAAATCATCTTCCTCTTTGAGTACTGAAAATAGAAATAATAACAAGGACGGGAACCGCGAGAATGAGTACAAGAAAGGATTGAGACCCGTTCTCTGGCTTGCCCCAAGCTTTCCGTTGCAGACAGAGGAGCTCTTGCCATTGCTTGACATTCTTGCCAACAAGGTCAAGGCAATTCGCCGTTTGAGAGAACTACTAACCACAAAACTTCCAGCGGGAACCTTTCCTGTCAAGGTTGCCATTCCGGTTGTCCCCACTATCAGAGTGATAGTCACTTTTACAAAGTTTGAAGAGTTGCAGCCCATGGATGAATTCACTACTCCCCCATCAAGCCCTCCTTGTGCAGGCAGAAACAGCCCTGCATCGTCGAATGGGACGTCATGGTTTCAGTGGATAAAAGGTCAACGCCCCAACTCCTTCTCAGGCAGTTCAAGCAGTAGGATAGAGAACATTCAAGACCCTTTTACGATCCCGCATGATTATGCTTGGATCACCGCAGAAGAAAAGAAGAAGAAAATGCAGGAGAAAAACAGATCAAAACGAAGCAGAAATCAGAACCGATAG 3321 48.84 MYQTKKSYTCQAAPKLLGGALQKATGWTRDNPSTSSSAHFQPPPLYKLYTLPPTIAPTISENLNQPLLLTTSFFSASFSSIKQAIMVTVEEVRRAQRAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMINKRYMYLTEEILKENPQVCAYEAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAIIIGADPVPSVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLVEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLNLDPKKLRSTRHVLGEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGLEWGVLFGFGPAIDVSKYAHSSVHKAIAMKDYTSLRKILSGLPRLCNPSEIQTETASLAEEEKADAISAVIDRRDVPNRDTPLHVAVKFGDETATELLMVAGADWSLQNEQGWSALQEAICNREERIAMIIVRHYQPLAWAKWCRRLPRLVGTMQRMRDFYMEITFHFESSVIPFISRIAPSDTYKIWKRGANLRADMTLAGFDGFRIQRSDQSVLFLGDGSEDGKIPSGSLCMVSHKGKEVMNALNGAGSQAAEDEVRQEVAAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTETIGPWKGKVYDMHNVVVSIKSRRVPGAMTDDEFFSSCNENETESEELDDILTEEEKRQLENVLKLDSSELTVENGEGNIGNHYNCYEHREIPTEDTNECMNGEVKQEKKGWFNGWRKRESKTEGQKKNVPPRSSLCVDEKVSDLLGESPSEYQNKAGRHSVDIGTQGEGLRRGREAKSSSSLSTENRNNNKDGNRENEYKKGLRPVLWLAPSFPLQTEELLPLLDILANKVKAIRRLRELLTTKLPAGTFPVKVAIPVVPTIRVIVTFTKFEELQPMDEFTTPPSSPPCAGRNSPASSNGTSWFQWIKGQRPNSFSGSSSSRIENIQDPFTIPHDYAWITAEEKKKKMQEKNRSKRSRNQNR 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3449040 3454270 + BLOR18229 Blo07g00297 62821

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00297 1106 SUPERFAMILY Thiolase-like 86 318 IPR016039 GO:0016746
Blo07g00297 1106 Gene3D - 321 472 IPR016039 GO:0016746
Blo07g00297 1106 Pfam Chalcone and stilbene synthases, C-terminal domain 323 465 IPR012328 -
Blo07g00297 1106 PANTHER UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN 387 1102 IPR021832 -
Blo07g00297 1106 PANTHER BNAA08G28070D PROTEIN 387 1102 - -
Blo07g00297 1106 MobiDBLite consensus disorder prediction 1021 1046 - -
Blo07g00297 1106 Pfam Chalcone and stilbene synthases, N-terminal domain 90 313 IPR001099 -
Blo07g00297 1106 Gene3D - 76 320 IPR016039 GO:0016746
Blo07g00297 1106 MobiDBLite consensus disorder prediction 1086 1106 - -
Blo07g00297 1106 ProSitePatterns Chalcone and stilbene synthases active site. 241 257 IPR018088 GO:0009058|GO:0016746
Blo07g00297 1106 ProSiteProfiles Ankyrin repeat region circular profile. 527 559 - -
Blo07g00297 1106 ProSiteProfiles Ankyrin repeat profile. 527 559 IPR002110 GO:0005515
Blo07g00297 1106 SUPERFAMILY Ankyrin repeat 520 585 IPR036770 -
Blo07g00297 1106 MobiDBLite consensus disorder prediction 855 877 - -
Blo07g00297 1106 SMART ANK_2a 560 589 IPR002110 GO:0005515
Blo07g00297 1106 SMART ANK_2a 527 556 IPR002110 GO:0005515
Blo07g00297 1106 Gene3D - 495 594 IPR036770 -
Blo07g00297 1106 MobiDBLite consensus disorder prediction 855 870 - -
Blo07g00297 1106 SUPERFAMILY Thiolase-like 320 462 IPR016039 GO:0016746
Blo07g00297 1106 MobiDBLite consensus disorder prediction 892 942 - -
Blo07g00297 1106 Pfam GPCR-chaperone 644 1081 IPR021832 -
Blo07g00297 1106 CDD CHS_like 101 464 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00297 K21437 ANKRD13; ankyrin repeat domain-containing protein 13 - pvy:116107143 1039.64
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00319 Blo-Chr1:3911009 Blo07g00297 Blo-Chr7:3449040 9.13E-137 dispersed
Blo02g00714 Blo-Chr2:22555818 Blo07g00297 Blo-Chr7:3449040 0 dispersed
Blo07g00297 Blo-Chr7:3449040 Blo10g00277 Blo-Chr10:3974561 0 dispersed
Blo07g00297 Blo-Chr7:3449040 Blo12g00124 Blo-Chr12:8666325 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g882 . . . . . . . . . . Cma06g01259 Cma14g01914 Car06g01082 Car14g01683 . Cpe08g00386 Cpe03g01613 . . . . . . . . . . . . . . . . . . Lsi05g01820 . . . . Blo07g00297 Bda11g00660 . . . Bma02g00733 Bma06g01627 . Cmo06g01269 Cmo14g01968 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000559 4 5 4 4 3 3 5 3 3 3 3 3 5 3 3 5 3 4 5 3 3 3 3 4 3 3 2 7 4 1 107
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00297 Blo_Chr07 FPKM 2.823232 3.052312 1.706454 2.211576 7.048259 7.710427 7.263798 0.536079 0.806152 1.163248