Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00315 ATGCTCTCCTCTCTTCCCGGGAAGCCTCACTCTGCTTCCCCTTGGCTCGACCGCCTCCGCTCCTCCAAGGGCTTCCCCTCCGTCGACTCTCCCACCCTCGGCCAATTCCTTTCCACCCATCTCCCTCCTTTCCTCCCCGATTCTCCCCCTCCCTCCCGCCACCCTACCCTTCCTCCTCCCCCTCTCCCTCTTCCGGATCACACTGTAACTGAAGACGCAGCGCTTGGCGGCCTCGTCCCTCGCATCCTCTCCGACCTCTTCTGCATCGCCCCCTCCTCCCATTCTCTTCAACTTTCCCGGAACAAGTTCCCCAGGAAACAGCCAAATCCTAAGAGTTTCTCCTTTCCCCTTCCTCCCACTGCTCTTCGCGACGACACTTCCCGTCGCAAGAGTCCGATTCGCATTCTAAACGACGAGCTTGTCCCCTCCTCCAACTCTGACAACACCACCAAAGGTGTTGAATTTAAAAGAACAGCAGATGCGGGTTGGGGAGATGTTGATGCGGACGAAGAGAATAGCGACAAAGAACTGGCCGGGTACTCAAGGAGCGAGGTAACAGTGATCGATACGAGCTGCCACGTGTGGAAGTCGGACAGGGTGGTTTTCAGGAGGAGAAATGTGTGGCAAATTAGGGCCAAAAAGGGCAAATTAAGGAGCTACGGAAGGAAGAAGCGTAGGCAGGACACGCACGACCCTGGGAATAACAACGCTAACGCTTTCAGTATCCAAGAATTATGCTGCTCAAACCCAGAGGATGCCTGTGGGAACCGATTAACAAAGCCGTCCTATGTAGCGGTGGTGGTGGTGAGCAGCCAAAATACGGAAGCCATGGTCGAGAGTGGAGCAGAGACTGGGATGAAAGATGACAGTTCGAATGGGGTTGGGGTGAGGTGGGACAGATTTTTGCAGCGGATGATGCTCAGGGTCTTGCTCGTCGAAGCTGATGACTCCACCAGGCAAATTATTACTGCGCTTCTCCGCAAATGTGGCTACAGAGTCGCAGCCGTTCCTGATGGCTTGAAGGCTTGGGAGTTGCTCAAGGGAAGATCCAGCAACATTGATCTCATATTGACAGAAGTAGACTTGCCATCAATATGTGGATTCGCTCTCCTGACCCTAATTATGGAGCATGACATTTGCAAAAATATTCCTGTTATAATGATGTCGTCCCAGGATTCTATCAGCACTGTGTATAAATGCATGATGAAAGGTGCTGCTGACTATCTGGTTAAACCCATACGCAGAAATGAGTTGAGAAATCTCTGGCAGCATGTTTGGAGAAGACAGTCATCGACTGCTGGAGGAAGTGGCCCCCGAGAGAGTGTTGCCCAACAAAGAGTTGAAGTTACATCTGAAAACGAGGCTGCCAGCAACCATTCCAACCATTCAAATGACTATATTGCCGATGTTCATCGTCATAAAGCATGCATCGAAAAAGGGAGTGATGCACAGAGCTCTTGTACAAAGCCTGACTTGGAATCCGAGAGACAGGAATCTTCTCGGGCCAACCTTGGCAGATCGTTTCTTGGTCCCTTGAAGTTTCAAAGGGATGAAACTGACATCAACTTGTGCCAGAAATCGCTTATGCATGAAAATGAAGCTGCAGGGCCCACTTTGGTTGCAAATGGGAACGCCAATGCAGAAATTGACCAAATGAGAGGTGCTGAGGCTGAAAGCCATGACACAGATACTGATGTTGCTTATGCCAATGCCAACAATGGCACCCTCGTTAGTTCTTCCAGAAACACCACTGACTTGATTGGAGCATTTGCAGACTATCCGGAATGCAATCATAGAAATTCCTCTTCGAGCAACGGCACTAGCAATTTTGATCATGCTTCGGGGTTAGATCTATCCTTGAAAAGGTGTCATCCAAGTGATTTTGAGGACAATCTTATGGCAGAAAGGCATACCCTCAGACCATCTAATGCTTCCGCCTTTTCTCGATACAGTCACAGGCCCATCCAGCACCTTCAACTGAAGTTTATCAAAGAAAATGGGACCAATCCAGACAAACATCTCTTTAGTATGGCTACAGGTTATGCCTCTCATATCCCTGATCCCAGATTCAGCATGCAACCCAGCAGCATCTCTCCGACTTCTGCTCACTCCAATCACATGAAGATTTTATCCCCTCCGGAGAAGACCTGCCCCGCACCCATTCAGGTGAAAGGTGTACGGTTAAACAACCCAGGCTCTGGCTATGGATGTGTGCTTTCTCCAATACTGTGTGCACAATCAGGATTATCACCGATTCCAAGCCCAAGTACAGCTGCCTATCCAAGGAATTCGTTCTACGAATCTAATCTCGAAAACATTAACTCCGAGAAACTGCCAGAGCAGCTTCATAAAAATCCCAACAATGCTGCAAACCAGGCAAGGGACATGCAGAGGCTGATGTTTGAGGATCATGGACATATTTCTCCCACCACTGATGTCAGTGCCAGCAGTAGCTTTTGCAATGGCGGTGTAACTCGTCTTAATGGGTTGGGATATGGAAGCCCCTCCGCAAGCGACTTCAATGTTCATCAGGTTCCCGTAGTCTCGAGTATAGCAGACACCAAGAGTGAAGAAGTGGACCTCCATAACATGAAAGATCTTCATCGATCTACGCAAAGAGAAGCAGCATTAACTAAGTTCCGCCTGAAGCGTAAAGATAGATGCTACGAGAAAAAGGTAAGATATGAGAGCCGGAAGAAGCTAGCGGAGCAACGCCCGAGAGTGAAAGGACAATTTGTTCGACAGTTGAACCTCGATCCACGGCCCCCACAAGCCAATGAAAGTTAG 2787 49.41 MLSSLPGKPHSASPWLDRLRSSKGFPSVDSPTLGQFLSTHLPPFLPDSPPPSRHPTLPPPPLPLPDHTVTEDAALGGLVPRILSDLFCIAPSSHSLQLSRNKFPRKQPNPKSFSFPLPPTALRDDTSRRKSPIRILNDELVPSSNSDNTTKGVEFKRTADAGWGDVDADEENSDKELAGYSRSEVTVIDTSCHVWKSDRVVFRRRNVWQIRAKKGKLRSYGRKKRRQDTHDPGNNNANAFSIQELCCSNPEDACGNRLTKPSYVAVVVVSSQNTEAMVESGAETGMKDDSSNGVGVRWDRFLQRMMLRVLLVEADDSTRQIITALLRKCGYRVAAVPDGLKAWELLKGRSSNIDLILTEVDLPSICGFALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMMKGAADYLVKPIRRNELRNLWQHVWRRQSSTAGGSGPRESVAQQRVEVTSENEAASNHSNHSNDYIADVHRHKACIEKGSDAQSSCTKPDLESERQESSRANLGRSFLGPLKFQRDETDINLCQKSLMHENEAAGPTLVANGNANAEIDQMRGAEAESHDTDTDVAYANANNGTLVSSSRNTTDLIGAFADYPECNHRNSSSSNGTSNFDHASGLDLSLKRCHPSDFEDNLMAERHTLRPSNASAFSRYSHRPIQHLQLKFIKENGTNPDKHLFSMATGYASHIPDPRFSMQPSSISPTSAHSNHMKILSPPEKTCPAPIQVKGVRLNNPGSGYGCVLSPILCAQSGLSPIPSPSTAAYPRNSFYESNLENINSEKLPEQLHKNPNNAANQARDMQRLMFEDHGHISPTTDVSASSSFCNGGVTRLNGLGYGSPSASDFNVHQVPVVSSIADTKSEEVDLHNMKDLHRSTQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQLNLDPRPPQANES 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3988006 3998520 - BLOR18247 Blo07g00315 62839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00315 928 MobiDBLite consensus disorder prediction 480 502 - -
Blo07g00315 928 MobiDBLite consensus disorder prediction 1 67 - -
Blo07g00315 928 MobiDBLite consensus disorder prediction 43 66 - -
Blo07g00315 928 Pfam CCT motif 873 915 IPR010402 GO:0005515
Blo07g00315 928 MobiDBLite consensus disorder prediction 429 464 - -
Blo07g00315 928 MobiDBLite consensus disorder prediction 100 153 - -
Blo07g00315 928 SUPERFAMILY CheY-like 301 431 IPR011006 -
Blo07g00315 928 ProSiteProfiles Response regulatory domain profile. 308 426 IPR001789 GO:0000160
Blo07g00315 928 Pfam Response regulator receiver domain 309 420 IPR001789 GO:0000160
Blo07g00315 928 MobiDBLite consensus disorder prediction 899 928 - -
Blo07g00315 928 Gene3D - 305 508 - -
Blo07g00315 928 CDD psREC_PRR 309 412 - -
Blo07g00315 928 SMART REC_2 307 422 IPR001789 GO:0000160
Blo07g00315 928 PANTHER TWO-COMPONENT RESPONSE REGULATOR 291 905 IPR045279 GO:0009736
Blo07g00315 928 MobiDBLite consensus disorder prediction 138 152 - -
Blo07g00315 928 ProSiteProfiles CCT domain profile. 873 915 IPR010402 GO:0005515
Blo07g00315 928 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 291 905 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00254 Blo-Chr1:3260216 Blo07g00315 Blo-Chr7:3988006 7.27E-64 dispersed
Blo04g00089 Blo-Chr4:767243 Blo07g00315 Blo-Chr7:3988006 4.65E-19 dispersed
Blo07g00315 Blo-Chr7:3988006 Blo12g00454 Blo-Chr12:22076112 3.97E-47 dispersed
Blo07g00315 Blo-Chr7:3988006 Blo12g00203 Blo-Chr12:13165601 4.07E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12590 PF00072 Response_reg 1.00E-21 CL0304 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00315 K12130 - zju:107414998 637.491