Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00338 ATGGGCTATGGAAAGCTAAAGCCGTCTGACCAAGGAGGGTCGACCTTAGACCAATCGGAAGCCTCGTCCTCGTACCAACCTCCACTGCGTAGCAGGAGGAAGAAGCTCGTCTTCCTCTCTCTTCTCTCTGTCACTCTACTCCTCGCGGCAGTCGTCTCCGCCGTTCTCCTCGTCGGCCAGCGAAATCGGGCTTCGGGTCGATCCGAAACTAATCTCCCCCGCAAACCGACCCAGGCCATTTCTCGGACCTGTAGCCGAGCTCGGTTCCCGTCACTCTGTGTCAACTCGCTCGTCGACTTCCCTGGCTCTCAGGCTGCAACGGAGCACGACCTCGTCCACATTTCGTTCAATATGACGCTGCAGCATTTCTCCAAGGCCCTCTATGTTTCCTCCGGAATCTCTAATTTGCCGATGAATCCTCGCGTCCGATCTGCCTACGAATCTTGCCTCGAGCTGCTCGACGATTCGATTGACGCCCTCGATCGCTCACTGCTCTCTGTCGCACCTCCGCCGGACGATGACACTCAATCCATTGGTTCCATCCCGGATGTCCTCACCTGGCTCAGCGCCGCACTGACCAACCAAGACACCTGTATGGAAGGATTAGACGATGTAAGTGGAACTATCAAAAATCAAATGACTGAAAGCCTTCGGGACTTGTCGGAGCTAGTGAGCAACTGTTTGGCCATTTTCTCCGGCACCGATTCCAGCGATTTTTCAGGCGTGCCGATTCAGAACCGGCGGCGGCTAATGGAGGCTGCCGATACATTGGACGAAAATGAGGAGAAAACGGTGGATTTCCCGAAGTGGATGAGCCGGAAAGAGAGGGAACTCCTGAGTTTACCGGTGTCGGCGATTCAAGCCGACATCGTGGTGTCGAAGAACGACGGAAACGGAACTTGCAAGACAATAACGGAGGCCATAAAAAACGCGCCGGAGCACAGCGATCGCCGCACAATAATTTACGTGATGGCAGGAAGGTACGAAGAGGAAAACTTGAAAGTGGGAAGGAAGAAGACGAACCTCATGTTCATCGGAGCCGGGATGGGGAAAACGGTCATATCGGGTGACAAAAGTGTCTCCGATGGGCTTACGACATTCCACACAGCCACCTTCGCTGCGACGGGAGCGGGTTTGATTTTGCGAGACATGACGTTTGAGAATTGGGCCGGACCGAGCAAGCACCAGGCGGTGGCCCTTCGAATCGGAGCGGACCATGCCGTGGTCTACCGATGCAGCATCATCGGCTACCAAGACACCCTCTACGTGCACTCTAATCGTCAATTCTTCCGAGAATGCGACATTTACGGTACCGTAGATTTCATTTTCGGCAATGCGGCGGTGGTGTTTCAAAACTGCAACATTAACGCTCGAAAGCCCATGGATCAACAGAAAAACACCATCACCGCCCAAAACCGAAAGGACCCGAATCAAAACACGGGAATTTCAATCCACGCTTGCCGCATTATGGCCACGCCTGATCTCGAGACGTCAAAGAGCAATTTCCCAACATATCTAGGCCGGCCATGGAAACTATACTCCAGAACAGTGTACATGTTATCGAACATAGGGGATCACGTACATCCGAGAGGATGGCTAGAATGGAACGGGAACTTTGCATTAGATACATTATACTATGGGGAATACATGAATTCCGGTCCAGGTGGGGCGGTTAGTGAACGGGTCACTTGGCCGGGCTATCGAGTCATCACATCGGCAATAGAAGCCAATAAGTTCACAGTTGCTGAATTCATATATGGATCGTCGTGGTTGCCGGACACCGGAGTGGCATTCTTGGCCGGATTATCTGACTGA 1815 52.89 MGYGKLKPSDQGGSTLDQSEASSSYQPPLRSRRKKLVFLSLLSVTLLLAAVVSAVLLVGQRNRASGRSETNLPRKPTQAISRTCSRARFPSLCVNSLVDFPGSQAATEHDLVHISFNMTLQHFSKALYVSSGISNLPMNPRVRSAYESCLELLDDSIDALDRSLLSVAPPPDDDTQSIGSIPDVLTWLSAALTNQDTCMEGLDDVSGTIKNQMTESLRDLSELVSNCLAIFSGTDSSDFSGVPIQNRRRLMEAADTLDENEEKTVDFPKWMSRKERELLSLPVSAIQADIVVSKNDGNGTCKTITEAIKNAPEHSDRRTIIYVMAGRYEEENLKVGRKKTNLMFIGAGMGKTVISGDKSVSDGLTTFHTATFAATGAGLILRDMTFENWAGPSKHQAVALRIGADHAVVYRCSIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCNINARKPMDQQKNTITAQNRKDPNQNTGISIHACRIMATPDLETSKSNFPTYLGRPWKLYSRTVYMLSNIGDHVHPRGWLEWNGNFALDTLYYGEYMNSGPGGAVSERVTWPGYRVITSAIEANKFTVAEFIYGSSWLPDTGVAFLAGLSD 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4366211 4368589 - BLOR18270 Blo07g00338 62862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00338 604 Gene3D - 283 602 IPR012334 -
Blo07g00338 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 233 IPR035513 -
Blo07g00338 604 Pfam Pectinesterase 290 587 IPR000070 GO:0030599|GO:0042545
Blo07g00338 604 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Blo07g00338 604 CDD PMEI-like_3 84 232 - -
Blo07g00338 604 PANTHER PECTINESTERASE 28 602 - -
Blo07g00338 604 SMART PMEI_2 75 230 IPR006501 GO:0004857
Blo07g00338 604 MobiDBLite consensus disorder prediction 11 27 - -
Blo07g00338 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Blo07g00338 604 SUPERFAMILY Pectin lyase-like 284 601 IPR011050 -
Blo07g00338 604 ProSitePatterns Pectinesterase signature 2. 435 444 IPR033131 -
Blo07g00338 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 232 IPR006501 GO:0004857
Blo07g00338 604 MobiDBLite consensus disorder prediction 1 27 - -
Blo07g00338 604 PANTHER PECTINESTERASE 28 602 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01091 Blo07g00338 CCT
Blo07g00338 Blo09g00029 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00338 Blo-Chr7:4366211 Blo07g00810 Blo-Chr7:25995500 3.63E-153 dispersed
Blo06g01091 Blo-Chr6:34203091 Blo07g00338 Blo-Chr7:4366211 2.23E-144 wgd
Blo07g00338 Blo-Chr7:4366211 Blo09g00029 Blo-Chr9:358877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00338 - - zju:107414790 868.226