Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00359 ATGGAAGACCAATCACCATCTCCACCGCGACGACCAAAAACCTACAACCTAACAGCATCTTCGATCTACTACAGCAAATCAACGGCGACGACCACAGCCATTTTCGCATCATTCTTGTTCAAACCCTGCAAAACAACTCCACCCACTCACATTCTCAGAGACGTATCTTTCACAGCCCACCCTTCTGAGGTCCTCGCCATTGTTGGCCCAAGCGGAGCAGGAAAATCCACTCTCCTCGACATTTTAGCAGCTCGAACCAAACCCTCTAATGGTTCCCTCTTCCTCAACTCATCCCCACTCAAGCCTTCTTCTTTCCGCAAACTCTCCGTTTATCTTCCCCAACACGATGCATGTCTGCCATTGTTGACGGTTTCAGAAACCTTCGCTTTCTCCGCTCGTCTTCTTCTTCCTAAATCCTCTGAAATTTCCGCCGTTGTTGACCATCTTCTCTCTGAATTGAGCTTAACGAAAATAGCCAACACCAGGCTTATCAATGGCCTTTCAGGAGGAGAGAGAAGAAGGGTTTCAATAGGTTTAAGCCTTCTTCATGATCCGGCTGTGATGCTTCTCGATGAACCCACTTCTGGTCTGGACAGTACTTCAGCTTTCAACGTAGTACAGACGCTAAAATCAATCTCTACTTCTCGTCACCGCACGGTGATTTTATCAATCCACCAACCCAGTTTCAAGATTCTCTCTGCCATTGACAGAATCTTGCTGCTCTCAAAAGGGTCTGTAGTTCACCATGGGAATCTTTCTTCCCTTCAAGATTTCTTGTTCTCCAATGGCTTCACTGTCCCTCCACAGCTGAATTCCTTAGAATACGCCATGGAAATACTAAACCAGCTTACAGAGCTCGAAACAGTTGCATCTTTATCGCTTCCTCCATCTTCCGCACCTGCCATTGTTGCACCTTCCGCCGAAAACGAAGAAAGAGAACAAATAACCTACAAAAGCTCAAGAATCCATGAAATTTTCACCCTTTTCGACAGATTTTGGAAAATAATCTGCAGAACAAAACAACTTCTTCTGACCAACACGATAGAAACTCTTATTGTGGGTCTTGTTTTGGGTACTATTTACATAAACATTGGATTCAGTAAGGAAGGGATTGAAAAGAGGTTTGGTTTATTTGCTTTCACTCTAACTTTCCTTCTCTCTTCCACCACTGAAACTCTTCCCATTTTCATCAACGAAAGGCCAATTCTTCTGAGTGAAGCATCAAGCGGAGTTTACAGGCTCTCTTCTTATATTATAGCAAATACCCTCGTTTTCATACCTTATTTGCTTGCGATTGCCATTATTTACTCAGTTTGTGTGTACTTTTTAGTGGGTTTATGTCCCACTTTTGAAGCTTTTTCTTACTTTGTTTTGATCATTTGGATCATTATTCTGATGGCAAACTCATTCGTCTTGTTCATAAGCTCCATCGCGCCAAACTACATTTCTGGGACTTCATTCGTAACCATTTTACTGGCAGCTTTCTTCCTATTTTCTGGGTATTTCATCTCGAAGGACAGCTTACCCAAATACTGGATTTTCATGCATTTTTTATCCATGTATAAGTATGCCCTAGACGCCCTCTTGATCAACGAGTATTCTTGCATTGCTTCGAGGTGTTTGGTCTGGTACAAGGAAGATAGCAAAGAATGCATGGTTACTGGCGAAGACGTGTTGCAGAAGAGAGGACTCCATGGGAGAGAGAAATGGGTTAACGTGTATGTTTTGATAGGGTTTTTTGTTGGTTATCGTCTTCTTTGTTTGCTTGTTTTGCTCAGAAGGGTTTCAAGATCTAAGAGCTGA 1803 42.87 MEDQSPSPPRRPKTYNLTASSIYYSKSTATTTAIFASFLFKPCKTTPPTHILRDVSFTAHPSEVLAIVGPSGAGKSTLLDILAARTKPSNGSLFLNSSPLKPSSFRKLSVYLPQHDACLPLLTVSETFAFSARLLLPKSSEISAVVDHLLSELSLTKIANTRLINGLSGGERRRVSIGLSLLHDPAVMLLDEPTSGLDSTSAFNVVQTLKSISTSRHRTVILSIHQPSFKILSAIDRILLLSKGSVVHHGNLSSLQDFLFSNGFTVPPQLNSLEYAMEILNQLTELETVASLSLPPSSAPAIVAPSAENEEREQITYKSSRIHEIFTLFDRFWKIICRTKQLLLTNTIETLIVGLVLGTIYINIGFSKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLSEASSGVYRLSSYIIANTLVFIPYLLAIAIIYSVCVYFLVGLCPTFEAFSYFVLIIWIIILMANSFVLFISSIAPNYISGTSFVTILLAAFFLFSGYFISKDSLPKYWIFMHFLSMYKYALDALLINEYSCIASRCLVWYKEDSKECMVTGEDVLQKRGLHGREKWVNVYVLIGFFVGYRLLCLLVLLRRVSRSKS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5798970 5800772 + BLOR18291 Blo07g00359 62883

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00359 600 SMART AAA_5 61 245 IPR003593 -
Blo07g00359 600 Gene3D - 40 261 IPR027417 -
Blo07g00359 600 Pfam ABC-2 type transporter 225 291 IPR043926 GO:0140359
Blo07g00359 600 Pfam ABC-2 type transporter 324 533 IPR013525 GO:0016020|GO:0140359
Blo07g00359 600 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524
Blo07g00359 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 6 594 - -
Blo07g00359 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 594 - -
Blo07g00359 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 268 IPR003439 GO:0005524
Blo07g00359 600 Pfam ABC transporter 52 195 IPR003439 GO:0005524
Blo07g00359 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 257 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00359 K05681 ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2 - qsu:112007275 869.381
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00359 Blo-Chr7:5798970 Blo10g00737 Blo-Chr10:23065163 4.10E-164 dispersed
Blo16g00190 Blo-Chr16:4298736 Blo07g00359 Blo-Chr7:5798970 1.10E-21 dispersed
Blo07g00359 Blo-Chr7:5798970 Blo04g00093 Blo-Chr4:805605 5.28E-95 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g798 . . Bda05g00099 . Bpe03g00256 . . . Cmo16g00094 Cmo18g01312 . . . . . . Cpe14g00074 Bhi01g01422 . . . Hepe07g0110 Mch10g0112 . . . . . . . . . . Cone14ag0047 Cone15ag0051 Lsi05g01179 . . . Blo07g00359 . . . . . . . . . . Cma16g00090 Cma18g01281 Car16g00080 . Cpe09g00057 . . . . . . . . Cla05g00929 Cam05g1016 Cec05g1020 Cco05g1016 Clacu05g1005 Cmu05g0958 Cre05g1039 . Csa03g01761 Chy06g00989 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010883 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00359 Blo_Chr07 FPKM 95.314026 98.966263 59.911232 59.803963 32.250294 36.17643 32.222721 419.871613 469.506989 404.16626