Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00430 ATGTCTTATTTTGGGAACCAACACTCTTCCTACTACTCTACTTCCTCTGGTTCAAGTTCAAACACTCCTCCAGATGGTGGCTCCTCCTCCGCTCGCCGGAATTCTCCGCCACCATCCGGACGCCACTCCAAGTATCGAGGTGTTCGGAGCAGGAGCGGGAAATGGGTGTCTGAAATTCGCGAGCCCCGTAAAACTACACGCATTTGGCTGGGGACTTACCCCACACCGGAGATGGCTGCAGCCGCCTACGATGCGGCGGCTCTGGCATTAAAGGGGCCGGATACAATATTGAATTTCCCGGATTCGATGTATTCCTACCCTGTTCCTGCTTCTAATTCTGCAAACGATATAAGGGCAGCTGCAGCGAGGGCCGCGGAGGCTCGGCAGCCCTCGTCAGCTTCCGGCGGGAACTCAAGGGCAGGTCAATTTGGAAATGAAGATGGGACGAATTCTCGATTGGCTGCCGGACAAGAGTATGTGGATGAGGATGATCTGTTGAACATGCCGAATTTGCTGGCTGATATGGCGGAAGGAATGATGGTTAGCCCGCCGAGGACACAGTATCCTGACTCCTCGTCAGACACTTTCAATGGAGATGAGCTTTGGCGATGA 612 53.76 MSYFGNQHSSYYSTSSGSSSNTPPDGGSSSARRNSPPPSGRHSKYRGVRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDAAALALKGPDTILNFPDSMYSYPVPASNSANDIRAAAARAAEARQPSSASGGNSRAGQFGNEDGTNSRLAAGQEYVDEDDLLNMPNLLADMAEGMMVSPPRTQYPDSSSDTFNGDELWR 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8484956 8485567 + BLOR18362 Blo07g00430 62954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00430 203 Pfam AP2 domain 43 92 IPR001471 GO:0003700|GO:0006355
Blo07g00430 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 29 202 - -
Blo07g00430 203 MobiDBLite consensus disorder prediction 121 150 - -
Blo07g00430 203 MobiDBLite consensus disorder prediction 1 37 - -
Blo07g00430 203 MobiDBLite consensus disorder prediction 185 203 - -
Blo07g00430 203 MobiDBLite consensus disorder prediction 130 150 - -
Blo07g00430 203 MobiDBLite consensus disorder prediction 1 60 - -
Blo07g00430 203 CDD AP2 43 102 IPR001471 GO:0003700|GO:0006355
Blo07g00430 203 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Blo07g00430 203 ProSiteProfiles AP2/ERF domain profile. 44 100 IPR001471 GO:0003700|GO:0006355
Blo07g00430 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 202 - -
Blo07g00430 203 SMART rav1_2 44 106 IPR001471 GO:0003700|GO:0006355
Blo07g00430 203 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
Blo07g00430 203 MobiDBLite consensus disorder prediction 177 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01111 Blo07g00430 CCT
Blo07g00430 Blo09g00093 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00430 Blo-Chr7:8484956 Blo12g00499 Blo-Chr12:22835745 2.92E-47 dispersed
Blo15g00153 Blo-Chr15:1552776 Blo07g00430 Blo-Chr7:8484956 2.79E-32 wgd
Blo06g01111 Blo-Chr6:34529809 Blo07g00430 Blo-Chr7:8484956 2.26E-48 wgd
Blo07g00430 Blo-Chr7:8484956 Blo09g00092 Blo-Chr9:1744422 1.76E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12603 PF00847 AP2 1.30E-12 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00430 - - cit:102618475 191.045