Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00473 ATGGCTACCACGGTCAGTTTGAACATCATTTTCTTAGTCTTGACCTTCTTTATTATCTTTGAGAAAACCGTGCCGGAAAGTCATTCCGGAGACATCGATCGGTGGTGTAACAAAACGCCGCACCCGGAAACGTGCAAGTATTACATGTCGTCACCAAAGATCAACAGCCGTCATAATTTTCGTCTGAAACGTAGGTCTGAGTTTCGAAAAATGGTGGTGCGAGTGGCAATGGAAAGAGCTCTGAGTGCCCAAAGTTATGCATGGCAACTTGGGGAAAATTGTGAAAACGATCGGCAGAAGGCTGCTTGGTCGGACTGCTTAAAGCTCTATAATAACACCATACTTCAACTACATAGAATCCTTCAAGGGCTCAGCAAGTCTCAAAGTTGCTCCGACTTTGATGTGCAAACCTGGCTTAGTGCTGCCCTAACGAACATCGAAACATGTCGTACCGGTGCAAAAGAACTTCTTGTTTCAGATTTCATTAGTGGAATCACGTCGGCAAATGTGTCGGAACTTATTAGCAACGGTTTGGCTATTAATAGAATGATGTTGGATGTTAAGGAAAGGATGAATTATTCAGTAAGTGAAGAAAATGGTTTTCCGGCGAAGGGTCAAAAGTATCCGAGTTGGGTGGTGAACGGAGATCAGAAATTGTTGGCTTCTTCGACTGTGACAGCAAATCTGGTGGTGGCCAAAGACGGGTCTGGGAGTTTCACGACTGTTCAGACAGCATTAGAGGCGGCGGGGAAGAGAAATGGGAAGGGAAGGTTTGTTATATATGTGAAGTCAGGTATTTATCGAGAAAATATTGAAGTTGGAGCTAATAATAATTACATTATGATGGTGGGTGATGGGATGAAAAAGACAATAATTACAAGTGATAGAAGTGTTGGAAGAGGCTTTACAACCTTCAATTCTGCCACTGCTGGAATTGATGGTCTTGGCTTCATAGCACGGGGGATTACATTCATTAATGGAGCTGGTCCAAAAATGGGTCAGGCAGTTGCTCTCCGATCAGCCTCTGATCTCGCCGTCTTCTACCGATGTGCCTTTTACGGGTATCAAGACACCCTTATGGTCCTCTCACAAAGGCAATTCTATAGAGAGTGTTACATCTATGGCACAATTGACTTCATTTTTGGCAATGCAGCTGTAGTCTTTCAAAAATGCATCATCTATGTAAAAAAGCCCTTAAAGGGCCAAGTTAATGTCATCACAGCTCAAGGCCGAAACGATCCAAATCAAAATACAGCAATTTCAATCCACAAATCACAAATCCGAGCCGCTCCCGATCTTAAGCCAGTGGTTCATGCTTTCAGAACGTACTTAGGCCGACCATGGATGCGATATTCTCGGACTGTTATTTTGAAAACTTACCTGGATAATTTGGTGAGCCCTGTGGGGTGGCTGGCTTGGCAAAACAGTAATTTTGCTTTGAGCACTTTGTATTATGGTGAGTATAATAACTTTGGCCCAAGGGCTTCAACCAGGTATAGGGTGAGATGGAGGGGCTTTCACGTAATTACAAGCCCACAAGTTGCCTCTCGTTTTACTGTGAATAGCCTCATTTCTGGGCAGCCGTGGTTGTCCACTGCCGGAGTTCCATTCTCAGCGGGACTCTGA 1626 44.22 MATTVSLNIIFLVLTFFIIFEKTVPESHSGDIDRWCNKTPHPETCKYYMSSPKINSRHNFRLKRRSEFRKMVVRVAMERALSAQSYAWQLGENCENDRQKAAWSDCLKLYNNTILQLHRILQGLSKSQSCSDFDVQTWLSAALTNIETCRTGAKELLVSDFISGITSANVSELISNGLAINRMMLDVKERMNYSVSEENGFPAKGQKYPSWVVNGDQKLLASSTVTANLVVAKDGSGSFTTVQTALEAAGKRNGKGRFVIYVKSGIYRENIEVGANNNYIMMVGDGMKKTIITSDRSVGRGFTTFNSATAGIDGLGFIARGITFINGAGPKMGQAVALRSASDLAVFYRCAFYGYQDTLMVLSQRQFYRECYIYGTIDFIFGNAAVVFQKCIIYVKKPLKGQVNVITAQGRNDPNQNTAISIHKSQIRAAPDLKPVVHAFRTYLGRPWMRYSRTVILKTYLDNLVSPVGWLAWQNSNFALSTLYYGEYNNFGPRASTRYRVRWRGFHVITSPQVASRFTVNSLISGQPWLSTAGVPFSAGL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10502942 10504814 + BLOR18405 Blo07g00473 62997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00473 541 Pfam Pectinesterase 228 526 IPR000070 GO:0030599|GO:0042545
Blo07g00473 541 ProSitePatterns Pectinesterase signature 2. 373 382 IPR033131 -
Blo07g00473 541 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 184 IPR035513 -
Blo07g00473 541 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 185 IPR035513 -
Blo07g00473 541 ProSitePatterns Pectinesterase signature 1. 254 273 IPR018040 -
Blo07g00473 541 SMART PMEI_2 27 180 IPR006501 GO:0004857
Blo07g00473 541 CDD PMEI-like_3 35 181 - -
Blo07g00473 541 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 184 IPR006501 GO:0004857
Blo07g00473 541 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 8 540 - -
Blo07g00473 541 PANTHER PECTINESTERASE 8 540 - -
Blo07g00473 541 Gene3D - 221 541 IPR012334 -
Blo07g00473 541 SUPERFAMILY Pectin lyase-like 222 540 IPR011050 -
Blo07g00473 541 Pfam Plant invertase/pectin methylesterase inhibitor 32 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00473 Blo-Chr7:10502942 Blo16g00613 Blo-Chr16:24726464 0 dispersed
Blo06g01091 Blo-Chr6:34203091 Blo07g00473 Blo-Chr7:10502942 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00473 K01051 - qsu:112007203 701.819