Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00484 ATGAGAGATTTTAGGGAATTTTCTGCGCCATCTTCTCGTTGCGGAGCAGGAATCATAAAAAGTATCCGTTTGGAGAACTTCATGTGCCATAGTAATTTGGAAATCCAGCTTGGCGAGTGGGTGAACTTTATCACTGGTCAAAATGGAAGTGGAAAGAGCGCAGTATTAACTGCTTTATGCGTTGCATTTGGGTGTCGAGCTAAAGGGACCCAAAGGGCATCTACTTTGAAGGATTTCATAAAAACTGGTTGCAGCTATGCTGTAGTTCACGTTCAATTAAGAAACCAAGGTGAAGAAGCTTTTAAGTCCGAAATATATGGTGATGTCATTATTATTGAACGCAGAATTTCTGAGGCTAGTAATTCCACTAATTTAAAGGATTGCCAAGGAAAAAGGGTTTCCAGTCGGAAAGATGATCTTCGTGAGATAGTTGAACATTTTAATATTGATGTTGAGAATCCTTGTGTGATAATGAGTCAGGACAAAAGTAGAGAGTTTCTGCATTCTGGAAATGACAAAGATAAATTTAAGTTCTTTTTCAAGGCTACACTTCTTCACCAAGTTAACGATCTCTTGAAGAATATTTTTGAACAACTGAGATCTGCAAATGCTCTAGTTGATGATTTGGAAACCTCAATAAGACCTGTTGAGAACGAACTTAGTGAGCTGCAAGGAAAGATAAAGAACATGGAGCATGTAGAAGAAATATCTCAGCAGATTGAGCAAGTAAGTAAGAAGCTGGCATGGTCATGGGTATATGATGTTGACAGACAACTTCAGCAGCAAAGCACAAAGATTGAAAAGCTAAAAGACCGCATTCCTAAGTGCCAGGCAAAAATTGACCGTCAATTGGATCTGGTGGAAAAATTGAGAAAAAGCTTTGCTGAGAAAAAAGATCAGATCGCACACATGGTGGACAAAACTTCAGAAGTGAGAAGTATGAAGGATGAACTGCAAGAAACTCTTACTCAGATGGCGATACTGCCTCGTCTTGTAGCAATGTTACCGAAGGTGGAGGAGATTTTTCGTTTACTTTCGGAGTTAAGGGCTGACCTTGCTCAGTTGCGAGCAGAGTTCCGACGAGGTCCAGAACTTCCACCGAATGTTTGTTCGAGGGTCGACAAAGGAAAAGAGGTGATGGGTATTGACGATTCTGACTCCCGTAATCTGAACTGGTCAACAGACGGCAAAGATCAAGAGTGTTCGCTGGTGGTGGGTCGACGCGAGGAGCGACGATACCGCGATCTAGGGTGTCCGCCGATTGTGGGTAGATGTGAGGAGCAAAGGTACCGTGGTTTACCACGATTTGATTTTTACCGAAACGAGGAGCCTTGA 1335 42.1 MRDFREFSAPSSRCGAGIIKSIRLENFMCHSNLEIQLGEWVNFITGQNGSGKSAVLTALCVAFGCRAKGTQRASTLKDFIKTGCSYAVVHVQLRNQGEEAFKSEIYGDVIIIERRISEASNSTNLKDCQGKRVSSRKDDLREIVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLHQVNDLLKNIFEQLRSANALVDDLETSIRPVENELSELQGKIKNMEHVEEISQQIEQVSKKLAWSWVYDVDRQLQQQSTKIEKLKDRIPKCQAKIDRQLDLVEKLRKSFAEKKDQIAHMVDKTSEVRSMKDELQETLTQMAILPRLVAMLPKVEEIFRLLSELRADLAQLRAEFRRGPELPPNVCSRVDKGKEVMGIDDSDSRNLNWSTDGKDQECSLVVGRREERRYRDLGCPPIVGRCEEQRYRGLPRFDFYRNEEP 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10999988 11022452 + BLOR18416 Blo07g00484 63008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00484 444 Pfam AAA domain 21 247 IPR038729 GO:0140664
Blo07g00484 444 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 12 324 - -
Blo07g00484 444 Coils Coil 192 226 - -
Blo07g00484 444 CDD ABC_SMC6_euk 19 171 - -
Blo07g00484 444 Gene3D - 18 250 IPR027417 -
Blo07g00484 444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 296 IPR027417 -
Blo07g00484 444 Coils Coil 259 279 - -
Blo07g00484 444 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 12 324 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Blo07g00484 444 Coils Coil 338 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00484 Blo-Chr7:10999988 Blo04g01244 Blo-Chr4:24476376 1.42E-41 dispersed
Blo02g00439 Blo-Chr2:5865001 Blo07g00484 Blo-Chr7:10999988 7.96E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00484 K22804 - csv:101208493 503.827