Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00489 ATGGCTGCCTCTACTATGACTCTTTCTTCACCATCTTTTGCTGGAAAGGTGGTGAAGCTCTCTCCCTCTGCTCCGAAGATTGTCGGTAATGGAAGAGTCAGCATGAGGAAGACCACCTCCTCTGGCAGCCCATGGTATGGTCCCGACCGTGTAAAGTACTTGGGTCCATTCTCCGGTGAGGCTCCATCCTACCTGACTGGAGAATTCCCAGGAGATTATGGGTGGGACACGGCGGGATTATCGGCTGACCCAGAGACCTTTGCAAAGAACAGGGAGCTAGAAGTTATCCACAGTCGTTGGGCTATGCTGGGAGCACTCGGATGCGTATTCCCGGAGCTTCTATCCAGAAACGGCGTAAAGTTCGGAGAGGCCGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGACGGAGGACTTGACTACTTAGGCAACCCTAGTTTGGTCCACGCTCAAAGCATCTTAGCCATATGGGCTTGTCAGGTCATCTTGATGGGAGCCGTCGAAGGCTACCGTGTCGCCGGAGGACCACTTGGAGAAATCACCGACCCAATCTACCCTGGTGGGTCGTTTGATCCATTGGGTCTGGCGGAGGACCCAGAGGCATTTGCAGAGCTAAAAGTGAAGGAGATAAAGAATGGAAGACTAGCCATGTTCTCAATGTTTGGATTCTTCGTTCAGGCTATTGTCACCGGAAAGGGACCTTTGGAGAATTTGGCCGATCACCTTGCCGACCCCGTTAATAACAACGCCTGGGCCTATGCCACCAACTTTGTTCCCGGAAAGTGA 786 52.42 MAASTMTLSSPSFAGKVVKLSPSAPKIVGNGRVSMRKTTSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEITDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11342150 11342935 + BLOR18421 Blo07g00489 63013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00489 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 261 IPR001344 GO:0009765|GO:0016020
Blo07g00489 261 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 261 - -
Blo07g00489 261 Gene3D Chlorophyll a/b binding protein domain 52 254 - -
Blo07g00489 261 Pfam Chlorophyll A-B binding protein 61 227 IPR022796 -
Blo07g00489 261 SUPERFAMILY Chlorophyll a-b binding protein 44 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01695 Blo-Chr1:56640994 Blo07g00489 Blo-Chr7:11342150 7.82E-66 dispersed
Blo07g00489 Blo-Chr7:11342150 Blo14g00843 Blo-Chr14:30803394 0 dispersed
Blo07g00489 Blo-Chr7:11342150 Blo14g00842 Blo-Chr14:30800478 6.84E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00489 K08912 - rcu:8264152 511.531