Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00496 ATGTTTGCGCACAAGATCAAACGATGTCCGATCACAAAAAGTCACGATTGGACGCGATGTCCTTACGCCCACCGAGGCGAGAAGGCCCAACGAAGAGACCCTCGAAAGTTCAACTACTCGGCAATTTCTTGCTCGGATTTCAGAAACGGGAAGTGCGATAAAGGCGAGTCATGTGAACTCGCTCACGGCGTTTTCGAGTACTGGCTCCATCCGGCGAAATATCGAACTCGTCCATGCAATGCCGGCAGATACTGCGAGAGAAAAGTATGCTTTTTTGCCCATTCTCCTGAGGAGCTTAGATCGGAGACGAAATATAAATGCCGTTTCGTTTATCCACCCATCGGAGACGGAAAATACGACGAAGCTGAAATCATCTCCGCGTCATCGTCAGTGCCGAGGAGCGCCGATGGAGTGAAAGAGAATTATTTGAAGAGATTGGATGAGATAGAGATGAAAGAAAGAAATTGTGGATCCCAGGAAACAGAGATGGAGAATATGAATATCAATTGGATATATGAGTTGCTCCAGTAA 531 46.89 MFAHKIKRCPITKSHDWTRCPYAHRGEKAQRRDPRKFNYSAISCSDFRNGKCDKGESCELAHGVFEYWLHPAKYRTRPCNAGRYCERKVCFFAHSPEELRSETKYKCRFVYPPIGDGKYDEAEIISASSSVPRSADGVKENYLKRLDEIEMKERNCGSQETEMENMNINWIYELLQ 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11955000 11955530 - BLOR18428 Blo07g00496 63020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00496 176 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 1 154 - -
Blo07g00496 176 SMART c3hfinal6 38 64 IPR000571 GO:0046872
Blo07g00496 176 SMART c3hfinal6 73 96 IPR000571 GO:0046872
Blo07g00496 176 ProSiteProfiles Zinc finger C3H1-type profile. 38 65 IPR000571 GO:0046872
Blo07g00496 176 PANTHER UNKEMPT FAMILY MEMBER 1 154 IPR045234 -
Blo07g00496 176 Gene3D - 39 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00496 Blo-Chr7:11955000 Blo02g00066 Blo-Chr2:452529 3.56E-45 dispersed
Blo07g00496 Blo-Chr7:11955000 Blo04g00230 Blo-Chr4:1804209 5.27E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12609 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00496 - - qsu:112033871 223.787