Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00511 ATGGGTACCAGACCCCAGAATCCATGCCAAGAAGACGACGACGACGACCTTCATAGCGGTCGTGCCGCCACTATTTCAGGCCAATCTGTGTCCATGAGTGGCAGCATCGGATCCCCCTCCAGCCGAAGTGAGCAAACAATGGCTACCCCAGCCAGTGACAATACTTTCCTCCGATTAAACCACCTTGATATTCACGGAGACGATGCCGGATCGCAAGGCGCTATTTCTAACAAGAAGAAAAAGAGAGGTCAGCGTGCTGTCGGAGGAGACAAGAGTGGAAGAGGGCTTCGCCAATTCAGCATGAAAGTTTGTGAAAAAGTGGAAAGCAAGGGAAGGACGACCTATAACGAGGTTGCAGATGAACTTGTGGCTGAGTTTGCTGATCCTAGCTGTAGTCTTGCAACCCCAGATCAGCAACAATATGATGAAAAGAACATTCGGCGAAGGGTATACGATGCCCTAAATGTTCTCATGGCAATGGACATTATATCGAAGGATAAAAAAGAGATACAATGGAAGGGTTTACCTCGTACCAGTCTGAATGATGTTGAAGAACTAAAGACAGAGAGGCAGGGGCTTAGAAATAGAGTAGATAAGAAAGCTGCGTACCTGCAAGAGCTGGAGGAGCAATTTTACGTAGGGCTTCAGAATCTGATTCAGCGAAATGAGCAGTTATACAGCTCTGGAAATGCTCCAAGTGGTGGTGTGTCTTTACCTTTTATCCTGGTGCAGGAGAATCCTCTAGATGCCCCAAGAGACTCACTGTGTGCTAGCACTGGCAATGATTCAACATTTTGGGAATTGGGTGTTGTTTCATCAATGGCCACCATCTACAGAGGAGGCATCCTTGTCTTAGAAGAGAAGGATACTCTGAACCTAAGGGCCTCAATAGGTTTGGGATTGGCTCACGTATTTGATGCACCAAGGGATGCGAAGCTTGGAAGAATCTCTTGA 954 47.17 MGTRPQNPCQEDDDDDLHSGRAATISGQSVSMSGSIGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAISNKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSCSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDVEELKTERQGLRNRVDKKAAYLQELEEQFYVGLQNLIQRNEQLYSSGNAPSGGVSLPFILVQENPLDAPRDSLCASTGNDSTFWELGVVSSMATIYRGGILVLEEKDTLNLRASIGLGLAHVFDAPRDAKLGRIS 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12918857 12925458 + BLOR18443 Blo07g00511 63035

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00511 317 Coils Coil 190 210 - -
Blo07g00511 317 SUPERFAMILY Winged helix DNA-binding domain 94 175 IPR036390 -
Blo07g00511 317 MobiDBLite consensus disorder prediction 22 49 - -
Blo07g00511 317 Gene3D - 86 179 IPR036388 -
Blo07g00511 317 Gene3D Transcription factor DP 180 253 IPR038168 -
Blo07g00511 317 PANTHER TRANSCRIPTION FACTOR DP 20 247 IPR015648 GO:0005667|GO:0051726
Blo07g00511 317 SMART DP_2 181 289 IPR014889 -
Blo07g00511 317 SMART E2F_TDP_2 91 174 IPR003316 GO:0005667|GO:0006355
Blo07g00511 317 Pfam E2F/DP family winged-helix DNA-binding domain 94 174 IPR003316 GO:0005667|GO:0006355
Blo07g00511 317 MobiDBLite consensus disorder prediction 1 49 - -
Blo07g00511 317 SUPERFAMILY E2F-DP heterodimerization region 180 246 IPR037241 -
Blo07g00511 317 PANTHER TRANSCRIPTION FACTOR DP 20 247 - -
Blo07g00511 317 MobiDBLite consensus disorder prediction 67 94 - -
Blo07g00511 317 Pfam Transcription factor DP 182 246 IPR014889 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00511 K04683 TFDP1; transcription factor Dp-1 - zju:107414839 412.535
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo16g00208 . 3 377 E2F-DP Transcription Factor Family AT3G48160 54.6 1.4e-102 370.2
Blo04g00746 BCT 3 358 E2F-DP Transcription Factor Family AT3G48160 57.2 7.2e-94 341.3
Blo04g00746 BCT 21 359 E2F-DP Transcription Factor Family AT3G01330 50.6 8.9e-80 294.3
Blo07g00511 . 80 247 E2F-DP Transcription Factor Family AT5G02470 50.9 5.7e-40 161.8
Blo14g00243 BCT 17 447 E2F-DP Transcription Factor Family AT2G36010 53.8 2.7e-119 426.0
Blo08g00058 BCT 22 478 E2F-DP Transcription Factor Family AT2G36010 50.6 1.5e-114 410.2
Blo14g00243 BCT 10 458 E2F-DP Transcription Factor Family AT5G22220 55.6 1.6e-108 390.2
Blo08g00058 BCT 11 491 E2F-DP Transcription Factor Family AT5G22220 52.7 2.5e-106 382.9
Blo12g00527 . 227 520 E2F-DP Transcription Factor Family AT5G22220 58.8 4.0e-80 295.8
Blo07g00511 . 80 247 E2F-DP Transcription Factor Family AT5G02470 50.9 5.7e-40 161.8
Blo14g00243 BCT 10 458 E2F-DP Transcription Factor Family AT5G22220 55.6 1.6e-108 390.2
Blo08g00058 BCT 11 491 E2F-DP Transcription Factor Family AT5G22220 52.7 2.5e-106 382.9
Blo12g00527 . 227 520 E2F-DP Transcription Factor Family AT5G22220 58.8 4.0e-80 295.8
Blo14g00243 BCT 17 447 E2F-DP Transcription Factor Family AT2G36010 53.8 2.7e-119 426.0
Blo08g00058 BCT 22 478 E2F-DP Transcription Factor Family AT2G36010 50.6 1.5e-114 410.2
Blo04g00746 BCT 21 359 E2F-DP Transcription Factor Family AT3G01330 50.6 8.9e-80 294.3
Blo16g00208 . 3 377 E2F-DP Transcription Factor Family AT3G48160 54.6 1.4e-102 370.2
Blo04g00746 BCT 3 358 E2F-DP Transcription Factor Family AT3G48160 57.2 7.2e-94 341.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004186 1 2 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 3 1 1 1 1 1 1 1 1 3 3 1 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12610 PF02319 E2F_TDP 1.50E-20 CL0123 Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00511 Blo_Chr07 FPKM 18.654301 21.725391 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.132307