Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00555 ATGGAATGGCAACGGGGAGGAAGTGAAGACCAATGCTTTGGATTGGCGGAGGCAAGGGGCTTCAGTTCGCGAAGGAATTGGCTAGAGGTTGTGGTCTGGCTTGCATTTTGGTCTGAACCAGTTTGTCCCGCTGGTTCTTGCTCTGGAGAAGACAACAGCTTGTGTAACGACTTGAATGCGTCTAGTGAGGCCAAGCTTCCAGGCATGGTTTTGGCTGCAGTTATGCCTCCTCTGATTGGTGACTTGGTAGAAGCCATTGGAATGGATAAGACAATGAGGGTTACGGTTAGGGTTCAAAGTTTGGCATCACTCACCCAATCAGAGGAGCTGGCGCGAAGAGCTCTCAGTCAAGGCCTTCACCATCACCGAAATGCCTTAGACAGAGCTGCTGGTGGCGCTGTCCAACCGCTTGAAGCTCAGGCTTCGTCGGAAAGCACTGGACGAAGCTTCGCGGTGGCTGGAGCCCGAGCTCTAGCTTCTACCGGACAAGTGTTTCCAAAGTCTGGCTTTGTTGTCTGTACAGTGGGGAGTAGTGTGGTGAAATATATCCCTAAGGAGAAAAGGAAGGAGTTGTTAGATATGTACGGACTGAATCCAGCAGAAAATGGATCGCAATTAGGGCAGCAGTCGGAATGGAGTCCGGACGGAGGCGAAACGGGTATCCAAGTGCTTTTCATCTGGGTTTTCTTTGATCTTCGCAATTTGGGGCTGACCAGTAGAGAATCGTATCCTGAGCGTCCTGGTGTACCTAACTGTGTGTATTATATGCGAACTGGGTTCTGTGGGTATGGAAGCAGATGTCGTTTCAATCATCCTCGCGATCGAGCTGCGGTCGTAGCTGCTGTAAGAGCTACCGGGGATTACCCGGAACGAGTAGGGGAACCTGTGTGTCAGTATTATTTGAAAACTGGAATGTGTAAATTTGGTGCATCCTGCAAGTTTCACCATCCAAAACATGGAGGCGGATCACTGAACCAGGCTCCTCTTAATATCTATGGATACCCAATTCGACCGGGTGAGAGAGAATGCTCCTACTATTTAAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATCCTCAACCAGCTGGCTCATCCACGCCAATTACCACACCTCAATTTTATCCATCGGTGCAGTCTCCTTCAGTTCCTATGCCTGACCAATATGGAGTGGCATCCACTAGCTTGAGGGTAGCCAGGCCACCTCTTTTACCTGGTTCTTATGTGCAAGGGACCTATGGTCATGTTTTGCTTCCCCCAGGAGTTGTTCCAATTCCAGGATGGAGTCCATACTCGGCACCTGTAAGTCCTGCCTTATCTCCTGGTGCTCCACACACGGTTGGAGCAACTTCTGTTTATGGAGTAGCTCAGCTGTCTTCTACAACCTCATCTCTTCCTCGACCATATTCCTCTTTACCTTCATCTGTCGACCCTTCTAGCAGTAGGGAACAGTTGTTTCCAGAGAGACCTGGTGAACCTGAATGCCAATATTACATAAGAACTGGTGACTGCAAGTTTGGATTAGCTTGTCGATATCATCATCCTCACAACTGGATTGTACCTAGGACTAATTGTATTCTTAGTGCACTTGGCCTTCCCTTGCGACTGGGGGTTGAACCTTGTACATTTTACTTGCAAAATGGACACTGCAAATTCGGATCAACCTGTAAGTTTGATCATCCTTTGCGGACAATGAGATACAGTCCATCAGCCTCTTCTCTCATTGACATGCCAGTTGCTCCTTATCCCGTTGGGTCCCTGCTTGCCACTTTGGCTCCATCATCTTCTTCGGAGCTTAAACCAGATTTGATGTCTGGATCAAGGAAAGAGTCCTATTCAGCTAGATTGCCTTCTTCTGGCAGTACCTCTAATAGTACAGTTGGTTTAATTTACTCTCAGACTTGA 1914 48.12 MEWQRGGSEDQCFGLAEARGFSSRRNWLEVVVWLAFWSEPVCPAGSCSGEDNSLCNDLNASSEAKLPGMVLAAVMPPLIGDLVEAIGMDKTMRVTVRVQSLASLTQSEELARRALSQGLHHHRNALDRAAGGAVQPLEAQASSESTGRSFAVAGARALASTGQVFPKSGFVVCTVGSSVVKYIPKEKRKELLDMYGLNPAENGSQLGQQSEWSPDGGETGIQVLFIWVFFDLRNLGLTSRESYPERPGVPNCVYYMRTGFCGYGSRCRFNHPRDRAAVVAAVRATGDYPERVGEPVCQYYLKTGMCKFGASCKFHHPKHGGGSLNQAPLNIYGYPIRPGERECSYYLKTGQCKFGITCKFHHPQPAGSSTPITTPQFYPSVQSPSVPMPDQYGVASTSLRVARPPLLPGSYVQGTYGHVLLPPGVVPIPGWSPYSAPVSPALSPGAPHTVGATSVYGVAQLSSTTSSLPRPYSSLPSSVDPSSSREQLFPERPGEPECQYYIRTGDCKFGLACRYHHPHNWIVPRTNCILSALGLPLRLGVEPCTFYLQNGHCKFGSTCKFDHPLRTMRYSPSASSLIDMPVAPYPVGSLLATLAPSSSSELKPDLMSGSRKESYSARLPSSGSTSNSTVGLIYSQT 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15168773 15192423 - BLOR18487 Blo07g00555 63079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00555 637 ProSiteProfiles Zinc finger C3H1-type profile. 291 319 IPR000571 GO:0046872
Blo07g00555 637 SMART c3hfinal6 246 273 IPR000571 GO:0046872
Blo07g00555 637 SMART c3hfinal6 337 364 IPR000571 GO:0046872
Blo07g00555 637 SMART c3hfinal6 492 519 IPR000571 GO:0046872
Blo07g00555 637 SMART c3hfinal6 291 318 IPR000571 GO:0046872
Blo07g00555 637 SMART c3hfinal6 538 565 IPR000571 GO:0046872
Blo07g00555 637 MobiDBLite consensus disorder prediction 614 637 - -
Blo07g00555 637 ProSiteProfiles Zinc finger C3H1-type profile. 246 274 IPR000571 GO:0046872
Blo07g00555 637 MobiDBLite consensus disorder prediction 613 637 - -
Blo07g00555 637 ProSiteProfiles Zinc finger C3H1-type profile. 538 566 IPR000571 GO:0046872
Blo07g00555 637 Gene3D - 238 319 - -
Blo07g00555 637 SUPERFAMILY CCCH zinc finger 339 365 IPR036855 GO:0046872
Blo07g00555 637 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 339 364 IPR000571 GO:0046872
Blo07g00555 637 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 494 518 IPR000571 GO:0046872
Blo07g00555 637 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 294 318 IPR000571 GO:0046872
Blo07g00555 637 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 540 564 IPR000571 GO:0046872
Blo07g00555 637 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 248 273 IPR000571 GO:0046872
Blo07g00555 637 ProSiteProfiles Zinc finger C3H1-type profile. 492 520 IPR000571 GO:0046872
Blo07g00555 637 SUPERFAMILY CCCH zinc finger 294 318 IPR036855 GO:0046872
Blo07g00555 637 MobiDBLite consensus disorder prediction 464 492 - -
Blo07g00555 637 Gene3D - 491 576 - -
Blo07g00555 637 Gene3D - 323 371 - -
Blo07g00555 637 MobiDBLite consensus disorder prediction 464 485 - -
Blo07g00555 637 SUPERFAMILY CCCH zinc finger 539 569 IPR036855 GO:0046872
Blo07g00555 637 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 209 629 - -
Blo07g00555 637 PANTHER PROTEIN PHOSPHATASE RELATED 209 629 - -
Blo07g00555 637 SUPERFAMILY CCCH zinc finger 250 275 IPR036855 GO:0046872
Blo07g00555 637 ProSiteProfiles Zinc finger C3H1-type profile. 337 365 IPR000571 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00449 Blo-Chr4:3705378 Blo07g00555 Blo-Chr7:15168773 5.29E-13 dispersed
Blo07g00555 Blo-Chr7:15168773 Blo12g00022 Blo-Chr12:1544529 7.30E-15 dispersed
Blo10g00044 Blo-Chr10:418056 Blo07g00555 Blo-Chr7:15168773 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12612 PF00642 zf-CCCH 2.10E-09 CL0537 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00555 - - tcc:18613492 698.353