Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00613 ATGAGGACAACGGGTGGAAAGCCTGCTCCTCGCTCTGTAAGCCCATGGTACGGACCTGACAGAGTCAAGTACCTCGGCCCGTTTTCCGGCGAGGAGCCATCGTATTTGACCGGCGAGTTTCCCGGAGATTACGGATGGGACACTGCAGGATTATCGGCCGACCCCGAGACATTTGCCAAAAACCGAGAGCTCGAAGTCATTCACTGCAGGTGGGCCATGCTCGGGGCATTGGGATGTGTATTCCCGGAGCTCCTCGCTAGAAATGAGGTCAAGTTCGGTGAAGCCGTCTGGTTCAAAGCCGGTTCACAAATATTCAGCGAGGGAGGGCTGGACTACCTTGGAAACCCGAGCCTGGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAGGTTATCTTAATGGGTGCCGTTGAGGGTTACCGTCTTGCCGGAGGGCCCGACCCCATCTACCCAGGAGGAAGCTTTGATCCTCTAGGACTTGCTGATGACCCAGAGGCATTTGCCGACCTTAAGGTGAAAGAAATCAAGAATGGGCGACTGGCCATGTTTTCCATGTTTGGATTCTTCGTGCAAGCCATTGTCACAGGAAAGGGACCTTTGGAGAACCTCGCCGATCATCTGGCCGACCCTGTCAACAACAATGCCTGGGCTTATGCCACAAACTTTGTACCTGGAAAGTGA 684 53.95 MRTTGGKPAPRSVSPWYGPDRVKYLGPFSGEEPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNEVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRLAGGPDPIYPGGSFDPLGLADDPEAFADLKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18946899 18947596 - BLOR18545 Blo07g00613 63137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00613 227 Gene3D Chlorophyll a/b binding protein domain 23 220 - -
Blo07g00613 227 SUPERFAMILY Chlorophyll a-b binding protein 15 224 - -
Blo07g00613 227 Pfam Chlorophyll A-B binding protein 33 193 IPR022796 -
Blo07g00613 227 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 11 227 IPR001344 GO:0009765|GO:0016020
Blo07g00613 227 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 11 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00613 Blo-Chr7:18946899 Blo14g00843 Blo-Chr14:30803394 3.17E-155 dispersed
Blo07g00613 Blo-Chr7:18946899 Blo14g00842 Blo-Chr14:30800478 1.23E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00613 K08912 - rcu:8265899 446.047