Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00617 ATGAATTCGGTAGAACTAAGAGCCATGGGAAAGAGGAGTTTAGAATGGAATTTGAATGACTGGAAGTGGGATGGGGATCTTTTCCTTGCAAGCTCTTCGAATTTGGTGCCATCCGGTACCTTGAGTCGACAAATTTTTCCGAATGGAACAATTCCAGTGACTGGAGGTTTGTCAAACAGTTCCTCATCGTGCTCAGATGATGTTACTATAGGAATTGAGAAAAGGAAGAACGAAATTGAAAAAGGGAGGAGAATTACTGGGATGGAAGATGGAGCCTTGAATGAGGAATCAGGTGGGCCTATTCTAAAGCTTGGTTCGCGTGGTTATCAGATTCCTGAGAGGGAAGTAGGGAGTTGGGAGGGTAGTAATGGCAAGAAGACTAAGCTTGTTGGAGGAAGTTCAAACCGTGCGATTTGCCAGGTGGAGGACTGTGGAGCTGATCTTAGCAAGGCCAAGGATTATCACAGGCGACATAAAGTCTGTGAGATGCATTCTAAAGCCAGCAGAGCGTTGGTAGGGAACCTCATGCAGCGATTTTGCCAGCAATGTAGCAGGTTTCATGCTCTTCCAGAGTTTGACGAAGGAAAAAGAAGTTGTCGTAGGCGTTTGGCTGGCCATAACAAGCGAAGAAGAAAAACAAATCCCGAGTCAGCTGCAAATGGAAGCTCCTCAAATGAAGATCAAACAAGTGGCTATCTACTTGTGAGCTTGTTGAGAATACTTTCCAACATGCATTCGAATCAATCAGACAACTCCGCCAATCAGGATCTGATATCTCATCTTTTAAGGAGCATTGCTGGTCAAAATAGCGAGCACAAGGAGAAAGACATATCTGTACATTTGCAAGAACCTCAAAATCTGCAAGACGGGAGATTGGTTGGCAACTCAGAGCTAGTCTCTACTTTTCTTTCCAATGGTGCTCAGGGCCCTTCAATGCCATCTAAACAGCATACCCCTTTGCCGTTGTCTGAGATGCCATTACAAGGTGTTTCTCCTCATGATTCCAGAAGTGGAGATACAAAAACAATTTCTTCAGTAAAACATGGAACAATGAACGGTTCACCAGCTTATTCAGAACTCATAGACTGTGCTGCAGTGAAAAGCAAGATGAATAACTTTGATTTGAATGACACATATATTGATTCTGATGATGGAATAGAGGATGTGGAGACATCTGTACTTCCTGTACATTTGAGGACAAGTTCCCTAGATTCTCCTTGGGCTCGACAAGATTCTCATCAGTCAAGTCCGCCTCAAACAAGTGGAAATTCAGATTCAGCATCTGCTCAGTCACCTTCTAGTTCTAGTGGGGAAGCTCAGGGGGAAGTTATGGCGCATACATGGATAAGGCCATTTTCTTGTCCGCAAGAAATGACTTGCATGAGCCGCACAGATCGCATTGTTATTAAACTATTTGGAAAAGATCCCAGTGATTTTCCTCTTGATCTACGAGCACAGGTTCTTGACTGGTTGGCACATAGTCCTACTGACATTGAGAGCTACATTAGGCCTGGTTGTGTGGTTCTTACCATCTATCTACGTCAGACAGAGGATGCGTGGGAGGAACTTTGCTATGACATAAGTTGTAGCTTGAACAGGCTCCTCCAAGGCTCAGATGATACTTTCTGGAGAACGGGATGGGTTTATGTCAGAATTCAGCATCATTTAGCTTTTGTTTTTCATGGTCAAGTTATGGTGGATACGTCGTTAGCTCTCAGAGGCTACCATTATTGTAATATTGTCAGTGTAAAACCTATTGCCGTAACTGCTTCAGAAAGGATTCAGTTTTCAGTTAGAGGCTTGAACTTGAAGCGGCCTGGAACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGACTGAGAAGGCTATTCAAGAATCAACTGACTCTGTTGATTCATTGAAGGAGCAGGATGATCATAATGAGCTGGAGTTCATCAGCTTTTCTTGTTCTATTCCTGTAGTAAATGGAAGGGGCTTCATTGAGGTTGAAGATCATGGATTCAGCAGCAGCTTCTTTCCATTTATAGTTGCGGAGGATGATGTATGTTCAGATATCCGTGTTCTTGAGACCGCACTGGAGTTGACTGACACGAGCTCAGACACAATGGGAGTAACAGTGATGGAAGCAAGGAGTCAAGCTATGGATTTTATTCATGAAATGGGCTGGCTTCTTCATAGGGAACAATTGAACTCTAGATTGAGGATTATGGATCCAAATGCAGACGCTTATCCTTTGGATCGGTTTAAGTGGCTTGTGGATTTCTCAATGGACCGTGATTGGTGTGCTGTAGTGAGGAAATTATTAAATATTCTGTTTGATGGAATTGTGAGTATGGGAGATCACCCTTCTCTGAATGAGGCCCTATACGAGATGGGTCTTCTACACCGGGCTGTAAGGAGAAGCAGTAAGTCGCTTGTGGAGCTCCTTTTGAGATACCAGCCCCAAAAAGTGACAACAGAAAATGAAGTGGTAGATGGATTTTTGTTTAGGCCTGACGCTGCAGAACCTGCCGGCTTGACCCCACTTCACATCGCAGCTGCTTTAGATGGGTCTGAGGATGTACTTGATGCATTAACCGACGACCCTGGAATGGTTGGAATTGAAGCATGGAAGAACTGTCGTGACAGCATGGGGTCCACACCTGAAGACTACGCTCGCTTACGCGGCCATTTCTCGTACATCCACCTCATCCAGAAGAAAATCAACAAGAGAGCTTCCTCTGGGCACGTGGTTCTCGATATTCATAGTGTTGTTCACTCGGATCATAGCACAAATGATAAGCAAACTGACAACTTGGGCAGTTGCTTTGAGGTCGGGCTGACCCAGCCGAGACCCAGTCTCAGGAGCTGCAGACTCTGTGATAAGAAACTCAGCTATGGAAAGTTGAGGCCATCTCTGGTTTACAGGCCTGCAATGTTGTCGATGGTGGGTATTGCAGCCGTCTGTGTGTGTGTGGCACTTCTGTTCAAAAGCTTGCCAGAAGTCCTTTTTGTATTGGGGCCGTTCAGGTGGGAGTTGGTACATTATGGAACGTGCTGA 3042 44.81 MNSVELRAMGKRSLEWNLNDWKWDGDLFLASSSNLVPSGTLSRQIFPNGTIPVTGGLSNSSSSCSDDVTIGIEKRKNEIEKGRRITGMEDGALNEESGGPILKLGSRGYQIPEREVGSWEGSNGKKTKLVGGSSNRAICQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNLMQRFCQQCSRFHALPEFDEGKRSCRRRLAGHNKRRRKTNPESAANGSSSNEDQTSGYLLVSLLRILSNMHSNQSDNSANQDLISHLLRSIAGQNSEHKEKDISVHLQEPQNLQDGRLVGNSELVSTFLSNGAQGPSMPSKQHTPLPLSEMPLQGVSPHDSRSGDTKTISSVKHGTMNGSPAYSELIDCAAVKSKMNNFDLNDTYIDSDDGIEDVETSVLPVHLRTSSLDSPWARQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQGEVMAHTWIRPFSCPQEMTCMSRTDRIVIKLFGKDPSDFPLDLRAQVLDWLAHSPTDIESYIRPGCVVLTIYLRQTEDAWEELCYDISCSLNRLLQGSDDTFWRTGWVYVRIQHHLAFVFHGQVMVDTSLALRGYHYCNIVSVKPIAVTASERIQFSVRGLNLKRPGTRLLCALEGKYLTEKAIQESTDSVDSLKEQDDHNELEFISFSCSIPVVNGRGFIEVEDHGFSSSFFPFIVAEDDVCSDIRVLETALELTDTSSDTMGVTVMEARSQAMDFIHEMGWLLHREQLNSRLRIMDPNADAYPLDRFKWLVDFSMDRDWCAVVRKLLNILFDGIVSMGDHPSLNEALYEMGLLHRAVRRSSKSLVELLLRYQPQKVTTENEVVDGFLFRPDAAEPAGLTPLHIAAALDGSEDVLDALTDDPGMVGIEAWKNCRDSMGSTPEDYARLRGHFSYIHLIQKKINKRASSGHVVLDIHSVVHSDHSTNDKQTDNLGSCFEVGLTQPRPSLRSCRLCDKKLSYGKLRPSLVYRPAMLSMVGIAAVCVCVALLFKSLPEVLFVLGPFRWELVHYGTC 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19072362 19077562 - BLOR18549 Blo07g00617 63141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00617 1013 MobiDBLite consensus disorder prediction 327 354 - -
Blo07g00617 1013 ProSiteProfiles Zinc finger SBP-type profile. 136 213 IPR004333 GO:0003677
Blo07g00617 1013 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 1012 IPR044817 GO:0003677
Blo07g00617 1013 MobiDBLite consensus disorder prediction 402 440 - -
Blo07g00617 1013 Pfam SBP domain 139 212 IPR004333 GO:0003677
Blo07g00617 1013 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 7 1012 - -
Blo07g00617 1013 SUPERFAMILY Ankyrin repeat 781 898 IPR036770 -
Blo07g00617 1013 Gene3D - 765 912 IPR036770 -
Blo07g00617 1013 MobiDBLite consensus disorder prediction 202 227 - -
Blo07g00617 1013 MobiDBLite consensus disorder prediction 333 352 - -
Blo07g00617 1013 Gene3D - 130 200 IPR036893 GO:0003677|GO:0005634
Blo07g00617 1013 SUPERFAMILY SBT domain 137 218 IPR036893 GO:0003677|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00617 Blo10g00099 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00100 Blo-Chr7:1472225 Blo07g00617 Blo-Chr7:19072362 3.00E-136 dispersed
Blo07g00617 Blo-Chr7:19072362 Blo17g00912 Blo-Chr17:29965441 8.12E-35 dispersed
Blo07g00126 Blo-Chr7:1727193 Blo07g00617 Blo-Chr7:19072362 3.81E-147 transposed
Blo01g00287 Blo-Chr1:3628133 Blo07g00617 Blo-Chr7:19072362 1.20E-33 transposed
Blo10g00099 Blo-Chr10:998605 Blo07g00617 Blo-Chr7:19072362 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12617 PF03110 SBP 1.50E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00617 - - qsu:112005479 1293.49