Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00625 ATGGCAGCCGTCGCCACAACTAGCGTGGTTCCCGCGAATAGGCGGCGTCCCCCCGCCGCTGCTGAAGATAAGGTGGAGTTCGAGACAACGGAGGGGGTCGAGCCGATTATGAGTTTTGATCAGATGGGTATTAAGGACGATCTGCTTCGTGGGATCTACGCTTATGGCTTTGAGAAACCCTCCGCCATCCAACAGAGAGCCGTCAGGCCAATCATTGAGGGTCGGGATGTAATAGCGCAGGCTCAATCTGGCACTGGCAAGACCTCCATGATTGCTCTCACCGTTTGCCAAATCGTGGATACATCAAGTAGAGAGGTACAAGCCTTAATATTGTCTCCTACAAGGGAATTGGCCACTCAGACAGAAAAAGTCATATTGACCGTTGGCGATTTCATAAATATACAAGTGCATTCATGCATTGGAGGGAAAAGTGTGGGCGAAGATATTAGAAAGCTAGAATATGGTGTTCATGTGGTGTCTGGAACTCCTGGCAGAGTTTGTGATATGATCAAGAGGAGAACACTTCGTACTAGAAACATTAAATTACTTGTCCTTGATGAATCTGATGAGATGTTGAGCAGAGGGTTCAAGGACCAAATTTATGACGTGTACAGATATCTACCGCCAGAGCTTCAGAGTGAGCATATTCTAATGGGAATGTTTACTGCTGGAATTGCTCTGGTTGGATGTTCTCTGTTTTTGAGCATTTTGCAGTTCGGATCTACCATGTTCTGGTCTTTTGGTCAGTCAATTGCCATGTTGCTAGTTCTTGATATGACTATGGTTGTCTTGATTTCTGCCACTCTTCCTCATGAAATTTTGGAGATTACGAACAAGTTTATGACAGATCCTGTGAGGATACTTGTTAAACGTGATGAGTTAACTTTGGAGGGTATTAAGCAGTTTTTCGTTGCAGTTGAAAGGGAAGAGTGGAAATTTGATACTCTATGTGATCTATATGATACACTAACCATTACACAGGCTGTTATTTTTTGCAACACGAAGAGAAAGGTGGAATGGTTGACAGAGAAGATGCGTAGTAATAACTTCACTGTTTCTCAAATGCATGGGGACATGCCACAAAAGGAAAGAGATGCTATTATGGGGGATTTCCGATCTGGTACAACACGTGTTCTCATAACTACAGATGTTTGGGCGCGAGGGATTGATGTTTCGTTGGTTATCAACTATGACCTTCCAAATAATCGAGAGCTTTACATCCACCGAATTGGTCGGTCTGGCCGTTTTGGACGAAAGGGTGTTGCAATAAACTTTGTGAAGAGTGATGACATCAAGATTCTGAGGGACATTGAGCAATATTACAGTACCCAGATTGATGAAATGCCAATGAATGTTGCTGATTTGATATAA 1371 43.47 MAAVATTSVVPANRRRPPAAAEDKVEFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQIVDTSSREVQALILSPTRELATQTEKVILTVGDFINIQVHSCIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRNIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQSEHILMGMFTAGIALVGCSLFLSILQFGSTMFWSFGQSIAMLLVLDMTMVVLISATLPHEILEITNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSQMHGDMPQKERDAIMGDFRSGTTRVLITTDVWARGIDVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19593452 19597476 - BLOR18557 Blo07g00625 63149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00625 456 Gene3D - 27 294 IPR027417 -
Blo07g00625 456 PANTHER BNAA01G25900D PROTEIN 21 213 - -
Blo07g00625 456 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 68 287 IPR014001 -
Blo07g00625 456 SMART helicmild6 339 417 IPR001650 -
Blo07g00625 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 439 IPR027417 -
Blo07g00625 456 PANTHER BNAA01G25900D PROTEIN 261 449 - -
Blo07g00625 456 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 37 65 IPR014014 GO:0003724
Blo07g00625 456 MobiDBLite consensus disorder prediction 1 21 - -
Blo07g00625 456 Pfam DEAD/DEAH box helicase 62 273 IPR011545 GO:0003676|GO:0005524
Blo07g00625 456 Gene3D - 295 456 IPR027417 -
Blo07g00625 456 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 298 456 IPR001650 -
Blo07g00625 456 CDD SF2_C_DEAD 299 426 - -
Blo07g00625 456 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 261 449 - -
Blo07g00625 456 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 21 213 - -
Blo07g00625 456 Pfam Helicase conserved C-terminal domain 312 417 IPR001650 -
Blo07g00625 456 SMART ultradead3 56 302 IPR014001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00625 Blo-Chr7:19593452 Blo16g00437 Blo-Chr16:17295539 6.08E-83 dispersed
Blo17g00282 Blo-Chr17:2994560 Blo07g00625 Blo-Chr7:19593452 2.56E-34 dispersed
Blo07g00625 Blo-Chr7:19593452 Blo18g00276 Blo-Chr18:2930723 1.48E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00625 K13025 - csv:101222664 728.013