Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo07g00773 | ATGAGCATTCCAAGAAATGGTAACGGCACCACCCAAGCTTGCGCTGCATGTAAATACCAGCGCAGGAAGTGCGCTCCCGACTGCGTTCTCGCACCTTTTTTTCCTCACTATCGTCAACGACAATTCCTCAACGCCCATAAATTGTTCGGCGTCAGCAACATCACCAAGATCATCAAATCCCTCGATCCTTCCGAGAAGGAGGAAGCCATGCGAACCATCATCTTCCAGTCAGACGTTCGCGCCAACGACCCAGTTGGCGGTTGTTACAGAATCATCCATGATTTACAGCGCCAACTCGAGTACTGTAGAGCCGAGCTCGATATCGTTCTTCATCAGCTCGCTTTGTGCAGAGCCCAAGCTCAGAAGCAGCACCACCCTCTGCTTCATATTCCTGAACCCATTGACGCCATGGTCAGCTGTGAAACTGTCAGCGCAGACCCTTCGAACACCTATAACTCATGCTCGATGCAGTATCAGTATCTTCTTCCTCATCAAGAACACCCAGATTTGCACGAAGATGTTGGAATATGGGCCATTAATGATTCTCTTTCCACGTCTTCTTCTTTTCACGCCAAGAATGTTTCTGCTTCAGAGTTTGACGATATCAAGCTTGATGTAACCTGTGAAAGAAACGGGCTCAAGTTTGAGTTTGATGATCTGGTAGATCGAAGTGAGGAAGAAGCAGTGATGAAGGAAGACAATGCTCTGTTAGAAGAGGAGACTATTTCCATTCATCAAACTCAAGATCATGATCTTAAAGGTGCAGCTACTTTATTTACACTCACAAATTGTAATACTTCAGCATGA | 807 | 46.22 | MSIPRNGNGTTQACAACKYQRRKCAPDCVLAPFFPHYRQRQFLNAHKLFGVSNITKIIKSLDPSEKEEAMRTIIFQSDVRANDPVGGCYRIIHDLQRQLEYCRAELDIVLHQLALCRAQAQKQHHPLLHIPEPIDAMVSCETVSADPSNTYNSCSMQYQYLLPHQEHPDLHEDVGIWAINDSLSTSSSFHAKNVSASEFDDIKLDVTCERNGLKFEFDDLVDRSEEEAVMKEDNALLEEETISIHQTQDHDLKGAATLFTLTNCNTSA | 268 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 24973447 | 24974404 | - | BLOR18705 | Blo07g00773 | 63297 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo07g00773 | 268 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
| Blo07g00773 | 268 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 8 | 235 | - | - | |
| Blo07g00773 | 268 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 108 | IPR004883 | - | |
| Blo07g00773 | 268 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 22 | 8 | 235 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo07g00773 | Blo-Chr7:24973447 | Blo16g00219 | Blo-Chr16:4932956 | 2.87E-27 | dispersed | |
| Blo13g00027 | Blo-Chr13:439174 | Blo07g00773 | Blo-Chr7:24973447 | 1.77E-08 | dispersed | |
| Blo07g00773 | Blo-Chr7:24973447 | Blo13g00135 | Blo-Chr13:4292002 | 2.25E-27 | transposed | |
| Blo07g00773 | Blo-Chr7:24973447 | Blo15g00256 | Blo-Chr15:2697547 | 3.18E-27 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12627 | PF03195 | LOB | 3.50E-35 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo07g00773 | - | - | qsu:112040573 | 325.479 |