Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00808 ATGGATTCCATCAAGTCTTTCAAGGGCTACAACAAGGTGGACGAGGCTGAAGCTCGAGAATTCCGGCGGAAAACTCGCCGGCGTCTCATCATTGTGGTAGTTTCCGCCGTCGTCCTCGTTGCTTTAGTCGTCGGCGTAGTTGTCGGCACTGTGATTCACAAGCGAAATAGTTCATCTTCTTCCTCCTCGACACAGTCGACTCCGGCTGCGTATATTAAAACTATCTGCGAGGTGACGGAATATCCAACCTCATGTATTGATTCGCTAGAGTCATCGAATAGCACCGACCCGGAAGCTCTCTTCAAGTTTTCTCTGCAAATCGCCATGACTGAGCTCTCCAAGCTTTCTAACAAGTCCACCCAGCGCATCACCGATGATATAAAGCTTAACGAGACATTGTGGCTCTGCCAGTCGCTTTTCGAAGACGCTATCGACAGCCTCAACAACTCGATATCAGCCATGGAAGTAGGCGAAGGAGAAAATCTCTTGACTGAGTCAAAAATCAACGACTTAAAAACCTGGCTCAGCACCACCATTACCGACCAGGAAACTTGTTTGGACGGACTTGAAGATCTAAACTCCACGCTCGTAGACGAAACAAGAACTGCAATGAAAAACTCCACCGAGCTTGTGAGCAACAGTTTAGCCATTGCAACGAAAATCCTGGGTCTATTGGCCGATTTCAACATTCCGATTCACCGGAGGTTGCTCAGGTTCAGAGGAACAGATTCAGATTTTCCGGATTGGGTAAGCGTCGGAGATCGGAGGTTGCTGCAAGCTAACAATGTGACGGCCAATGTGATCGTGGCGAAGGACGGCAGCGGAAAGTACAAGACGATTTCAGATGCGGTGAAGGCTGTGCCGACAAAGAGCAAAACGAGATTTATTATATATGTGAAGGCAGGAACGTATAACGAGATTGTGAGATTGGATAAGAACATGTGGAACGTTATGATGATCGGAGACGGAAAAACGAAGACCATTGTTTCCGGTAGCTTGAACTTCGTCGATGGCACACCTACTTTCTCCACACCCACTTTCGCTGTCGTCGGTAAAGGATTTATTGCCAGAGACATGGGCTTCGTCAACACAGCAGGACCAGCCAAGCACCAGGCTGTGGCGTTCCGGTCAGGATCAGACCTTTCGGTATTCTCAGGCTGCTCATTCAATGCTTACCAAGACACCCTCTACTCCCATTCCAATCGCCAATTCTACCGTGACTGTGACATTACCGGCACCGTCGACTTCATCTTCGGCAACGCGGCCGTCGTCTTCCAAAACTGCAACGTCATGCCTAGGCAGCCATTAAGCAACCAGTTCAACACCATCACAGCACAGGGAAAAACTGACCCTAATCAGAACACCGGCATATCCATCCAAAATTGCAATCTTTCACCTCTGCCTGGTATCGCTCTCACTGCTCAAACTTACCTCGGGAGGCCATGGAAACAATATTCCACTACAGTCATCATGTAG 1476 48.71 MDSIKSFKGYNKVDEAEAREFRRKTRRRLIIVVVSAVVLVALVVGVVVGTVIHKRNSSSSSSSTQSTPAAYIKTICEVTEYPTSCIDSLESSNSTDPEALFKFSLQIAMTELSKLSNKSTQRITDDIKLNETLWLCQSLFEDAIDSLNNSISAMEVGEGENLLTESKINDLKTWLSTTITDQETCLDGLEDLNSTLVDETRTAMKNSTELVSNSLAIATKILGLLADFNIPIHRRLLRFRGTDSDFPDWVSVGDRRLLQANNVTANVIVAKDGSGKYKTISDAVKAVPTKSKTRFIIYVKAGTYNEIVRLDKNMWNVMMIGDGKTKTIVSGSLNFVDGTPTFSTPTFAVVGKGFIARDMGFVNTAGPAKHQAVAFRSGSDLSVFSGCSFNAYQDTLYSHSNRQFYRDCDITGTVDFIFGNAAVVFQNCNVMPRQPLSNQFNTITAQGKTDPNQNTGISIQNCNLSPLPGIALTAQTYLGRPWKQYSTTVIM 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25954790 25956353 - BLOR18740 Blo07g00808 63332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00808 491 CDD PMEI-like_3 74 221 - -
Blo07g00808 491 ProSitePatterns Pectinesterase signature 1. 291 310 IPR018040 -
Blo07g00808 491 PANTHER PECTINESTERASE 8 491 - -
Blo07g00808 491 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 221 IPR035513 -
Blo07g00808 491 SUPERFAMILY Pectin lyase-like 264 491 IPR011050 -
Blo07g00808 491 Pfam Pectinesterase 266 491 IPR000070 GO:0030599|GO:0042545
Blo07g00808 491 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Blo07g00808 491 TIGRFAM PME_inhib: pectinesterase inhibitor domain 58 221 IPR006501 GO:0004857
Blo07g00808 491 Pfam Plant invertase/pectin methylesterase inhibitor 71 217 IPR006501 GO:0004857
Blo07g00808 491 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 222 IPR035513 -
Blo07g00808 491 PANTHER PECTINESTERASE 1-RELATED 8 491 - -
Blo07g00808 491 Gene3D - 260 491 IPR012334 -
Blo07g00808 491 SMART PMEI_2 67 217 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00808 Blo10g00957 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00808 Blo-Chr7:25954790 Blo11g00207 Blo-Chr11:1679936 1.95E-151 dispersed
Blo10g00956 Blo-Chr10:28639247 Blo07g00808 Blo-Chr7:25954790 4.01E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00808 - - jre:109013059 649.818