Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00810 ATGACCGACGTCAAGCATTTGATCGCCGGAGTCCTAGACTCCGGCAACCAGCCGTCCATGTGCAAGAGAAATAAGAAGAAGCTCTTGTTCTGGGCTCTCTCTGCTATTCTACTTATTTCGGTTGTCATTGGAATTGCAGTCGGAGTTGAGTCGAGAAATAAGCCCGACGAGATTGAGACTTCTCCTTCCCATTCTATAATCAAAACCTCTTGCAGTTCCACTCTGTACCCCAAGTTATGCTTCTCCACCCTTACTTCTGTCGACGGAGCTAGCAAAAAGGTCTCCGCCCCGAAAGATGTCATCGAATTGGCATTAAATATCACGACGGAAGCAGTGAAGCAGAATTATTTAGCCATTAAAAAGCTAACGACTCGAAAAGGCCTGACCAAGCGCGAGAAGGGTGCTCTCAATGATTGCCTGAACAACATGGATGACACCATCTACGAGCTTCACAAGGCTGTAGAGGATCTACATTTGTACCCAACCAAAAAATCTCTGTCCCAGCACGCAGACGACCTTAAAACTTTGCTCAGCTCTACAATCACCAACCAGGAGTCTTGCCTGGACGGGTTCTCCCACGAAGATGCTGACAGAAAGGTGAGGAAGGCGTTGCTGAAGGCGGAGACTAATATCGAGAAATTGTGCAGCAATGCCTTGGCGATGATTAAGAACATGACGGACACTGATATAATCAACGAGAGTAAAATGATGGTGAGGAAGAACCTGATGGAGGACGTCGGTCACGACGACATAAAGTGGCCGGAATGGCTGCCGGATTCCTACCGGCGTCTTTTGCAGTCGTCCTCTGTAACACCCAACGTAGTGGTGGCAGCCGACGGCAGTGGGAACTATCGGACAGTCTCGGCTGCAGTGGCTGCCGCTCCGTCGCGGCGCACTAGCAGATATATCATCAGAATCAAAGCCGGAGTTTACAGAGAAAACGTAGATGTGCCAAGAAGTAAAACCAACATCATGTTTTTGGGCGATGGAAGAACAACCACCATCATCACCGGAAGCAGGAATGTAGTCGATGGAAGCACAACTTTCAACTCCGCAACCGTTGCGGTGGTAGGGGACAGATTTCTAGCAAGAGACATTACCTTCCAAAACACGGCCGGCCCATCAAAGCACCAGGCGGTGGCGCTTCGCGTCGGGTCCGACCTCTCTGCGTTTTACCGATGTGACATGCTTGCCTACCAAGACACCCTCTACGTCCACTCCAACCGTCAATTCTTCGTAGAATGCATCATCGCCGGCACAGTAGATTTCATCTTCGGCAACGGCGCCGCCGTCTTGCAAAACTGTGACATCCATGCGCGTCGACCGAACTCCGGCCAAAAGAACATGGTCACCGCCCAAGGCCGGAGTGACCCGAACCAAAACACTGGCATTATCATCCAGAAATGTAGAATCGGTGCCACCTCCGACCTCAGGCCTGTTCAGAGCAGTTTCCCAACGTACCTGGGACGACCATGGAAGGAATACTCAAGGACGGTGGTTATGCAGACGTCGATAAGCAACGTCATAAACCCAGCCGGATGGCACATCTGGGACGGGACTTTCGCACTCAACACCCTGTTTTACGGCGAGTACATGAACACGGGAGCCGGGGCTGACACGTCGAAGAGGGTGAGTTGGAAAGGGTTCAAGGTGATCACCAGTGCAAGTGAAGCTCAGGCCTTCACTCCGGGAAGGTTCATCGCCGGAGGTAGTTGGTTGAGTGGCACTGGTTTTCCATTCTCTCTGGGTCTGTAG 1755 51.4 MTDVKHLIAGVLDSGNQPSMCKRNKKKLLFWALSAILLISVVIGIAVGVESRNKPDEIETSPSHSIIKTSCSSTLYPKLCFSTLTSVDGASKKVSAPKDVIELALNITTEAVKQNYLAIKKLTTRKGLTKREKGALNDCLNNMDDTIYELHKAVEDLHLYPTKKSLSQHADDLKTLLSSTITNQESCLDGFSHEDADRKVRKALLKAETNIEKLCSNALAMIKNMTDTDIINESKMMVRKNLMEDVGHDDIKWPEWLPDSYRRLLQSSSVTPNVVVAADGSGNYRTVSAAVAAAPSRRTSRYIIRIKAGVYRENVDVPRSKTNIMFLGDGRTTTIITGSRNVVDGSTTFNSATVAVVGDRFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVECIIAGTVDFIFGNGAAVLQNCDIHARRPNSGQKNMVTAQGRSDPNQNTGIIIQKCRIGATSDLRPVQSSFPTYLGRPWKEYSRTVVMQTSISNVINPAGWHIWDGTFALNTLFYGEYMNTGAGADTSKRVSWKGFKVITSASEAQAFTPGRFIAGGSWLSGTGFPFSLGL 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25995500 25998114 - BLOR18742 Blo07g00810 63334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00810 584 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Blo07g00810 584 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857
Blo07g00810 584 PANTHER PECTINESTERASE 32 583 - -
Blo07g00810 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 226 IPR035513 -
Blo07g00810 584 SUPERFAMILY Pectin lyase-like 270 583 IPR011050 -
Blo07g00810 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 226 IPR035513 -
Blo07g00810 584 Pfam Pectinesterase 273 569 IPR000070 GO:0030599|GO:0042545
Blo07g00810 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 225 IPR006501 GO:0004857
Blo07g00810 584 CDD PMEI-like_3 69 226 - -
Blo07g00810 584 SMART PMEI_2 62 221 IPR006501 GO:0004857
Blo07g00810 584 PANTHER PECTINESTERASE 32 583 - -
Blo07g00810 584 Gene3D - 267 584 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01091 Blo-Chr6:34203091 Blo07g00810 Blo-Chr7:25995500 4.78E-155 dispersed
Blo07g00338 Blo-Chr7:4366211 Blo07g00810 Blo-Chr7:25995500 3.63E-153 dispersed
Blo07g00810 Blo-Chr7:25995500 Blo09g00029 Blo-Chr9:358877 6.88E-153 dispersed
Blo17g00654 Blo-Chr17:15447297 Blo07g00810 Blo-Chr7:25995500 4.70E-134 dispersed
Blo18g00629 Blo-Chr18:10397379 Blo07g00810 Blo-Chr7:25995500 6.31E-140 dispersed
Blo10g00955 Blo-Chr10:28634906 Blo07g00810 Blo-Chr7:25995500 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00810 K01051 - jre:109004988 849.736