Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00818 ATGCAATTAGTGTCAAATGATAGTCATGGTGAAGATTCTTCAGAAAGTGAACCCATCTTGAGACAGTCCGAGCAAATATCATCAGAATCTACACCTTCCGATGAGATTACTTCAGTTGTAGATGTTAATGGTGATGATTTACAAAATCAAGAGGTTGATGAAACTTCTCATCTGGTGAATGTGGACCAATCACTATGTCGCATATGTCTTGACACTGGAGGGGAAGATTTAATTGCTCCCTGCAATTGCAAAGGCACCCAAAAGTTTGTTCATAGATCTTGCCTTGATAATTGGAGGTCTACAAAGGAAGGATTTGCTTTTTCTCATTGTACAGAATGCAGAGCAGTATTCATCTTGCGGGCAAATGTCCCTCCTGATAGATGGTGGTTGAGATTGAAATTTCATTTCCTTGTTGCAAGGGATCATGCATTCATCTTTATCATTGTGCAGCTGATAGTGGCATTCTTGGGAGTATTGGTGTACAAATTCTACGGTGAGGAACTAAGAGAAATGTTTGGTTACGAAGAACACCCATATGGTTTCTATGCCATGGCCGTTTTGGCTATCATTTTGGTCGGTCTGCTCTATGGTTTCTTCATAGCTATTATATGCGGACAGAGGATCAATGAACGCCATTATCACGTTCTTGCCAAACAAGAACTAACCAAGGAGTATGTGGTAGAAGATCGAGAATGTCATAAGAATACCCCTGAGCTCGACGCAAGCCACGTTATGGAGCTGAAGATGTTGGGCCTATATTAG 762 41.08 MQLVSNDSHGEDSSESEPILRQSEQISSESTPSDEITSVVDVNGDDLQNQEVDETSHLVNVDQSLCRICLDTGGEDLIAPCNCKGTQKFVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFHFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDRECHKNTPELDASHVMELKMLGLY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26239389 26242481 - BLOR18750 Blo07g00818 63342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00818 253 MobiDBLite consensus disorder prediction 19 37 - -
Blo07g00818 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 118 IPR013083 -
Blo07g00818 253 PANTHER OS02G0132300 PROTEIN 2 252 - -
Blo07g00818 253 Pfam RING-variant domain 66 113 IPR011016 GO:0008270
Blo07g00818 253 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 252 - -
Blo07g00818 253 SUPERFAMILY RING/U-box 60 117 - -
Blo07g00818 253 MobiDBLite consensus disorder prediction 1 37 - -
Blo07g00818 253 CDD RING_CH-C4HC3_MARCH 66 114 - -
Blo07g00818 253 SMART ringv_2 65 114 IPR011016 GO:0008270
Blo07g00818 253 ProSiteProfiles Zinc finger RING-CH-type profile. 58 120 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00818 Blo-Chr7:26239389 Blo14g00463 Blo-Chr14:5710144 5.37E-41 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00818 - - rcu:8259964 431.409