Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00834 ATGCTCGGCAGCTTAGTTTTTCAATCCCCTGTCAGTTCAAATCCTGCTCCGTCCTCTTCCATGAAGGCGAAACGCGCCGATCGGGATCCCCTCGATTCCTCCGTCGCCGATCACTCCGTCAAAAGGCAGAACGCCGGAGTTAATTTTCAAGGCGGGACTAGTGTTTCCGGGGATCAAAGCGTCGAGGATCGCGAAGAAGAAGAAGAGCACCGGCTGAGAGAAGAGGCGGAGCCGCTTCTCGACGGAGAGACGACCGGGTTGAGACTTTTGGGGCTCTTGCTACAATGCGCCGAGTGCATAGCCGTGGATAATCTTCAGGAAGCTACCGACCTCTTGCCGGATATCTCCGAGCTCTCCTCGCCATTTGGTTCCTCTCCGGAAAGAGTTGGCGCGTACTTTGTGCACGCCCTTCAGGCGCGTGTGATAAGCTCTTGTTTAGGTTCTTATTCGCCTTTGACGATCAAATCTCTTAATCAAACTCAGTCTCAGAAAATCTTCAATGCTTTTCAATTCTACAACTCCGTCAGTCCGTCGATCAAATTCTCACACTTCACGGCCAATCAAGCGATTTTCCAAGCTTTGGACGGCGAGGATCACATCCATATAATTGACCTCGACATAATGCAAGGCCTTCAATGGCCGGGATTGTTCAACATCCTCTCCTCCCGATCGAAGAGGATCCGGTCAGTGAGAATTACCGGCTTCGGATCGTCTTTTGAGCTACTTCAGGCAACCGGAAGGAGACTAGCGGAATTTGCGATCTCTCTACGGCTGCCATTCCAATTTCATCCATACGAGGGGAAAATCGGAAATCTAACCGATCTGAGCCAACTGGAGGTTCGGCAGAACGAGGCTACGGTGGTACACTGGATGCAGCATTGCTTGTACGACATAACGGGGAGCGATCTTGGAACGTTGAGATTGTTGACTTTGCTGAGACCGAAATTGATCACCATCGTTGAACAGGATCTCACCCACGGCGATAGCTTCTTAGGGAGGTTCGTCGAGGCGTTGCATTATTACAGCGCGTTATTCGACGCGCTCGGGGATAGTTTGAATGCAGACAGTGTAGAGAGGCATACGGTGGAGCAGCAGCTGTTCGGGTGTGAGATTAGGAACATTGTGGCCGTGGGTGGCCCCAAGAGGACCGGAGAGGTCATGGTGGAGAGGTGGGGGAATGAGCTTAGACGTGTCGGATTTCGACCTGCTTCCCTCGCCGGAAACCCTGCTGCTCAGGCGAGTTTGCTGCTGGGGATGTTCCCTTGCAAAGGGTACACTTTGGTTGAGGAAAATGGTTGCTTGAAGTTGGGTTGGAAGGATCTTTCTCTCCTCACCGCCTCTGCTTGGCAGCCAGTCGATTGA 1362 52.28 MLGSLVFQSPVSSNPAPSSSMKAKRADRDPLDSSVADHSVKRQNAGVNFQGGTSVSGDQSVEDREEEEEHRLREEAEPLLDGETTGLRLLGLLLQCAECIAVDNLQEATDLLPDISELSSPFGSSPERVGAYFVHALQARVISSCLGSYSPLTIKSLNQTQSQKIFNAFQFYNSVSPSIKFSHFTANQAIFQALDGEDHIHIIDLDIMQGLQWPGLFNILSSRSKRIRSVRITGFGSSFELLQATGRRLAEFAISLRLPFQFHPYEGKIGNLTDLSQLEVRQNEATVVHWMQHCLYDITGSDLGTLRLLTLLRPKLITIVEQDLTHGDSFLGRFVEALHYYSALFDALGDSLNADSVERHTVEQQLFGCEIRNIVAVGGPKRTGEVMVERWGNELRRVGFRPASLAGNPAAQASLLLGMFPCKGYTLVEENGCLKLGWKDLSLLTASAWQPVD 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26522441 26523802 - BLOR18766 Blo07g00834 63358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00834 453 PANTHER SCARECROW-LIKE PROTEIN 23 63 450 - -
Blo07g00834 453 MobiDBLite consensus disorder prediction 1 20 - -
Blo07g00834 453 ProSiteProfiles GRAS family profile. 80 450 IPR005202 -
Blo07g00834 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 63 450 IPR005202 -
Blo07g00834 453 Pfam GRAS domain family 91 450 IPR005202 -
Blo07g00834 453 MobiDBLite consensus disorder prediction 37 58 - -
Blo07g00834 453 MobiDBLite consensus disorder prediction 1 76 - -
Blo07g00834 453 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00834 Blo-Chr7:26522441 Blo16g00254 Blo-Chr16:5893820 1.39E-65 dispersed
Blo05g00280 Blo-Chr5:3067637 Blo07g00834 Blo-Chr7:26522441 9.91E-106 transposed
Blo10g00907 Blo-Chr10:28014474 Blo07g00834 Blo-Chr7:26522441 8.93E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12635 PF03514 GRAS 2.40E-110 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00834 - - zju:107404603 640.188