Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00853 ATGAACAGCAGCAGAGTGGTGAAAATGATTTACTCTTGGCAAGCCAGCAAAAAGGGTCTGCCGCCAGAGCTCCTGAATACATTAACCAATCCACCTCATTGCAGCTTCAAAATGGCTCTCGCACTGAACAAGGCGATGCAGTTGATGTCTCCTCCACAATTTCCAACGAAGAAGATGAAGAGGATCGAGGAACTCATGGTAGCAAATCGATGGGATATGGCGGAGAAGGAGATGAATCTGAGTGGAAGAGAAGGAAAATCGAAGTTTTTGCAACTGAATCGAGCGGAGCTGCAAGAGCCATTCGAGCCTCGAGTCGTCGTCCAGACGACCAGTGAAGTAGACATCCTTGACGATGGATATCGTTGGCGCAAATATGGACAAAAAGTAGTGAAAGGAAATCCAAATCCGAGGAGTTACTACAAGTGTACCAGTGCTGGCTGCACTGTAAGAAAACACGTCGAGAGAGGGTCTAATGACCTCAAGTCAGTAATAACAACTTACGAAGGAAAGCACAATCACCCTGTTCCGGCTGGCCGCAATATCAGCCATATGAACGCCGGAACTTGCATTGCTACGGCAGCGCAAGCTACTCCGACTGTTCAAAACCAAAGTCTCAGGCCAGAGCAGTCTCAAGATCATAATGGGATGGCGAAGTTTGACAGACCAGGTAGGCAGCAGGTGGGTTCCCCTGTCCATGGGTCAAGTTATGGAATGAACCATTGTACCCTGCCGAACCTGGCCGTGCCAGGGTTGGGACCTGGCCAAGCCAAGATTCCCGTTCTGCCAATGAATCCATACATAATGCAGCATAAACAGACTATTGTCGAGAGGAGAATTGACAGGGGAGCCAATGTCGGATGCTGTGTATCAGCGCATAATGAGTAG 885 48.81 MNSSRVVKMIYSWQASKKGLPPELLNTLTNPPHCSFKMALALNKAMQLMSPPQFPTKKMKRIEELMVANRWDMAEKEMNLSGREGKSKFLQLNRAELQEPFEPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERGSNDLKSVITTYEGKHNHPVPAGRNISHMNAGTCIATAAQATPTVQNQSLRPEQSQDHNGMAKFDRPGRQQVGSPVHGSSYGMNHCTLPNLAVPGLGPGQAKIPVLPMNPYIMQHKQTIVERRIDRGANVGCCVSAHNE 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26929234 26930323 + BLOR18785 Blo07g00853 63377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00853 294 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00853 294 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00853 294 Gene3D WRKY domain 102 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00853 294 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 240 IPR044810 GO:0003700
Blo07g00853 294 SUPERFAMILY WRKY DNA-binding domain 108 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00853 294 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00853 294 MobiDBLite consensus disorder prediction 206 234 - -
Blo07g00853 294 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 79 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00853 Blo-Chr7:26929234 Blo07g00873 Blo-Chr7:27396932 2.20E-14 dispersed
Blo07g00853 Blo-Chr7:26929234 Blo10g00892 Blo-Chr10:27901421 1.74E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12637 PF03106 WRKY 4.10E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00853 K18835 - cpap:110820643 251.906