Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00873 ATGGGCTCTGCTGTTCATGGGTCCGAGCAGAATCGAGTCCCCGATGGAGATGTGCCCGGGGATTCGAATGGGACTGAGTTTCCGGATTGCGTAGAAGCTCGCTCTACTTTTATAGGCGGCGCTAGGTACAAGCTGATGACTCCGGCGAAGCTTCCGATCTCTAGGGCTACTTGCATTACGATCCCACCGGGTCTCAGCCCTTCTTCATTTTTGGAGTCTCCAGTTTTGCTCACTAACATGAAGGTTGAGCCTTCTCCTACCACTGGCTCCTTTATAAAGTCTCATATGGTTCATGGCTATTCCAGTTCTGGAACATATCCTACTACTACATCGGTTTTCTCTAATTTGGGCGTCTCAGATGATGGGAAATCCAGCAATTTTGACTTAAAGCCACATATAAAAGCGAATATGATTCCTGCAGATCTGAACGGCCATAGAAGTGAACAATCTGTCCAAGTCCAAGTGCATGGTGAGCTTTCATCTTTTGCTCCCTTAAATGAAATGAGACGCTCTTCCCCTGTTCGCATACTCGCTGCAGGAATCAGTGCTGTGGCTGAGTTGAATGCCGACAAAATTAATCAGAGAATCCTTGAAAATACTGAAGTTCAACCCACATCGTTCGATCATAAAGGAACTGGTGTTTCAATAGTTGCTGATAGGTCATCAGATGATGGATATAACTGGCGAAAATACGGACAGAAACATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTACAAATGTACTCATCCTAATTGTGAAGTGAAAAAATTGTTTGAACGCTCTCTGGATGGACAAATAACTGAGATTGTCTACAAGGGTACCCATGATCATCCTAAACCTCAGCCAAGTCGAAGATATATGTCTGCTAACGTTATGTCCATGCAAGAAGGAAGATTTGATAAGCCTGCATCCTTAATAGGACAAGATGCTAACAGGTATGGTCATATTTCACATTCTGCCGAGCCAAATGATTATTCCGAGCATTCTCTTGCCGTAGCTACTGATGATAGTATTGAAGGCTCTGGTTCTTTGCCAAACAGAAACCTTGATGAAGCCGACGATGACGATCCTTTCTCCAAGCGGAGTTTTTTTTTGAGTAGGAGAATGGAAGCTGGTGAATTTGACGTCACTCCAGTTATTAAACCCGTAAGAGAACCACGTGTAGTTGTTCAAACTTTGAGCGAGGTTGATATACTCGATGATGGCTACCGCTGGCGCAAATACGGGCAGAAAGTAGTGAGAGGAAATCCAAATCCGAGGAGTTATTACAAGTGCACAAATTTGGGATGTCATGTGAGAAAACATGTTGAAAGAGCATCCCATGATCTTAAGGCTGTGATAACCACATATGAAGGGAAACACAACCATGATGTTCCAGCTGCAAAATCTAGTAGCCACGACACTCTTGGTCCGTCCTCGATGGGAGGAGGTCCATCCAAGTTCAGATCAGAAGAAGGTGATGCCATTAGCCTCGATCTTGGTGTTGGATCAAATGACTATGGCCAAACGGGGCAATACGAGCCTTCCCCTCGTCAACCTCTGAGCAGCACGGCCAACTTTCGGGTAGTTCAAGCAAAGCCTGTCTCTATGCATTTCGGTGTTATAAACGGTGGTGTAAATCAATATGGACGGAGAGAAAACGAGAGTACTCCTCCATTGAACCATTCGGCTTACTCTTATCCTCAGAATATCGGAAGAATATTAACTGGTCCTTGA 1719 44.56 MGSAVHGSEQNRVPDGDVPGDSNGTEFPDCVEARSTFIGGARYKLMTPAKLPISRATCITIPPGLSPSSFLESPVLLTNMKVEPSPTTGSFIKSHMVHGYSSSGTYPTTTSVFSNLGVSDDGKSSNFDLKPHIKANMIPADLNGHRSEQSVQVQVHGELSSFAPLNEMRRSSPVRILAAGISAVAELNADKINQRILENTEVQPTSFDHKGTGVSIVADRSSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSLDGQITEIVYKGTHDHPKPQPSRRYMSANVMSMQEGRFDKPASLIGQDANRYGHISHSAEPNDYSEHSLAVATDDSIEGSGSLPNRNLDEADDDDPFSKRSFFLSRRMEAGEFDVTPVIKPVREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNLGCHVRKHVERASHDLKAVITTYEGKHNHDVPAAKSSSHDTLGPSSMGGGPSKFRSEEGDAISLDLGVGSNDYGQTGQYEPSPRQPLSSTANFRVVQAKPVSMHFGVINGGVNQYGRRENESTPPLNHSAYSYPQNIGRILTGP 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27396932 27400319 - BLOR18805 Blo07g00873 63397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00873 572 MobiDBLite consensus disorder prediction 455 484 - -
Blo07g00873 572 SUPERFAMILY WRKY DNA-binding domain 220 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 Gene3D WRKY domain 387 453 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 Gene3D WRKY domain 214 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 Pfam WRKY DNA -binding domain 401 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 498 IPR044810 GO:0003700
Blo07g00873 572 SUPERFAMILY WRKY DNA-binding domain 392 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 MobiDBLite consensus disorder prediction 1 27 - -
Blo07g00873 572 MobiDBLite consensus disorder prediction 337 356 - -
Blo07g00873 572 ProSiteProfiles WRKY domain profile. 395 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 ProSiteProfiles WRKY domain profile. 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 PANTHER WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED 32 498 - -
Blo07g00873 572 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g00873 572 SMART WRKY_cls 400 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00873 Blo10g00861 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00853 Blo-Chr7:26929234 Blo07g00873 Blo-Chr7:27396932 2.20E-14 dispersed
Blo07g00873 Blo-Chr7:27396932 Blo10g00892 Blo-Chr10:27901421 2.22E-92 dispersed
Blo10g00861 Blo-Chr10:27159181 Blo07g00873 Blo-Chr7:27396932 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12639 PF03106 WRKY 1.30E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00873 - - qsu:112006109 667.537