Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo07g00879 | ATGTCTTGCACCAAGACACCTCAGCAAGACACAGCAAAAAGTGCGGTGTCTTGCACCAAGACACCGCAAGATGCAAGACACCACAAGAAACTACGGTTCATGGCATATTCTCAGGATTCATGGATAAAGGGATATAATGAAGCGTTAAAACTTGCTGATTACATCAATGGAATGGTTTCCGGGCAGGCTTCCCTTCCCGCATCTGGACCAGAAGCCCAACGTTATGCCTCGGGTATAAGAAGGAAGATATCAATATTGAGGACAAAAATCGACAGCTTAGAGTCCCTTATGGGGAAGCTACCTGGAAAGCAATTTCTGTCGGAAAATGAAATGAATCGACGCAAAGACTCACTCTTGAATTTGAGAACAAAAGTAAAACAGATGACTACAACGTTAAACACGTTGAATTTTGCCAACCGTGACAGCTTGCTTGGTCAAGAGATGAAGGAAGCCAATGCAACAAACAAGATAGAAGGATTGGACAACCCTGGTCTTATTGGCCTTCAGCAACAAATTATGAAGGCAGAGCAAGATGAAGGCCTTGAGAAGCTCCAGGAGACTGTAATCAGTGCAAAACATATTGCATTGGCCGTAAAGGAAGAACTCGACCTACATTCTAGGCTAATTGATGATTTGGATCAACATGTGGATGCCACTGATTCCCGACTAATGCTGGTGCAAAAGAAGCTGGCGATTTTGAATAAGCGCATAAAGAGAGATTGCTTGTGCAAGTGCATGCTATTATCGGTAGCTGGGATCATCGCTTTGGTAGTTGTCATGTGGTTACTCATCAAATACTTGTAG | 804 | 43.41 | MSCTKTPQQDTAKSAVSCTKTPQDARHHKKLRFMAYSQDSWIKGYNEALKLADYINGMVSGQASLPASGPEAQRYASGIRRKISILRTKIDSLESLMGKLPGKQFLSENEMNRRKDSLLNLRTKVKQMTTTLNTLNFANRDSLLGQEMKEANATNKIEGLDNPGLIGLQQQIMKAEQDEGLEKLQETVISAKHIALAVKEELDLHSRLIDDLDQHVDATDSRLMLVQKKLAILNKRIKRDCLCKCMLLSVAGIIALVVVMWLLIKYL | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27533929 | 27536974 | + | BLOR18811 | Blo07g00879 | 63403 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo07g00879 | 267 | Pfam | SNARE domain | 208 | 259 | IPR000727 | - | |
Blo07g00879 | 267 | CDD | SNARE_Qc | 174 | 231 | - | - | |
Blo07g00879 | 267 | PANTHER | SYNTAXIN | 37 | 261 | IPR045242 | - | |
Blo07g00879 | 267 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Blo07g00879 | 267 | Gene3D | - | 175 | 235 | - | - | |
Blo07g00879 | 267 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 37 | 261 | - | - | |
Blo07g00879 | 267 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 171 | 233 | IPR000727 | - | |
Blo07g00879 | 267 | SUPERFAMILY | SNARE fusion complex | 165 | 232 | - | - | |
Blo07g00879 | 267 | SMART | tSNARE_6 | 166 | 233 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00538 | Blo-Chr3:20802549 | Blo07g00879 | Blo-Chr7:27533929 | 1.36E-112 | dispersed | |
Blo07g00879 | Blo-Chr7:27533929 | Blo03g00554 | Blo-Chr3:21846350 | 9.85E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo07g00879 | K08503 | - | cit:102608030 | 326.635 |