Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00879 ATGTCTTGCACCAAGACACCTCAGCAAGACACAGCAAAAAGTGCGGTGTCTTGCACCAAGACACCGCAAGATGCAAGACACCACAAGAAACTACGGTTCATGGCATATTCTCAGGATTCATGGATAAAGGGATATAATGAAGCGTTAAAACTTGCTGATTACATCAATGGAATGGTTTCCGGGCAGGCTTCCCTTCCCGCATCTGGACCAGAAGCCCAACGTTATGCCTCGGGTATAAGAAGGAAGATATCAATATTGAGGACAAAAATCGACAGCTTAGAGTCCCTTATGGGGAAGCTACCTGGAAAGCAATTTCTGTCGGAAAATGAAATGAATCGACGCAAAGACTCACTCTTGAATTTGAGAACAAAAGTAAAACAGATGACTACAACGTTAAACACGTTGAATTTTGCCAACCGTGACAGCTTGCTTGGTCAAGAGATGAAGGAAGCCAATGCAACAAACAAGATAGAAGGATTGGACAACCCTGGTCTTATTGGCCTTCAGCAACAAATTATGAAGGCAGAGCAAGATGAAGGCCTTGAGAAGCTCCAGGAGACTGTAATCAGTGCAAAACATATTGCATTGGCCGTAAAGGAAGAACTCGACCTACATTCTAGGCTAATTGATGATTTGGATCAACATGTGGATGCCACTGATTCCCGACTAATGCTGGTGCAAAAGAAGCTGGCGATTTTGAATAAGCGCATAAAGAGAGATTGCTTGTGCAAGTGCATGCTATTATCGGTAGCTGGGATCATCGCTTTGGTAGTTGTCATGTGGTTACTCATCAAATACTTGTAG 804 43.41 MSCTKTPQQDTAKSAVSCTKTPQDARHHKKLRFMAYSQDSWIKGYNEALKLADYINGMVSGQASLPASGPEAQRYASGIRRKISILRTKIDSLESLMGKLPGKQFLSENEMNRRKDSLLNLRTKVKQMTTTLNTLNFANRDSLLGQEMKEANATNKIEGLDNPGLIGLQQQIMKAEQDEGLEKLQETVISAKHIALAVKEELDLHSRLIDDLDQHVDATDSRLMLVQKKLAILNKRIKRDCLCKCMLLSVAGIIALVVVMWLLIKYL 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27533929 27536974 + BLOR18811 Blo07g00879 63403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00879 267 Pfam SNARE domain 208 259 IPR000727 -
Blo07g00879 267 CDD SNARE_Qc 174 231 - -
Blo07g00879 267 PANTHER SYNTAXIN 37 261 IPR045242 -
Blo07g00879 267 MobiDBLite consensus disorder prediction 1 21 - -
Blo07g00879 267 Gene3D - 175 235 - -
Blo07g00879 267 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 37 261 - -
Blo07g00879 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Blo07g00879 267 SUPERFAMILY SNARE fusion complex 165 232 - -
Blo07g00879 267 SMART tSNARE_6 166 233 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00538 Blo-Chr3:20802549 Blo07g00879 Blo-Chr7:27533929 1.36E-112 dispersed
Blo07g00879 Blo-Chr7:27533929 Blo03g00554 Blo-Chr3:21846350 9.85E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00879 K08503 - cit:102608030 326.635