Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00880 ATGGCCGCTCTTCAACTACCAAATCCGAAGGGCGTAATCTCTACCTCTTCAATCTCCTCTCATTTTCATCGCAAAAGCTCATCTGCTCCCCCCATCATTCTCAGAGAATGCTCCACTTCGCATTGTAGACGAAGGGGTTTGTCTAGAAGGCACAATATCAACGTCATGAGCTGTTCTTTTTCGTCAATGGACTCCGCTAAGATTAAGGTAGTGGGCGTTGGCGGTGGTGGGAACAATGCCGTCAATCGAATGATTCGCAGTGGTTTACAGGGTGTTGATTTCTATGCCATTAACACAGATGCTCAAGCGTTAGTACAGTCTGCTGCAGAGAATCCATTACAAATTGGAGTGCTTTTGACTCGGGGTCTAGGTACTGGAGGAAATCCACTTTTAGGGGAGCAAGCAGCAGAAGAATCAAAAGAAGCTATTGCAAATGCTCTGAAGGGCTCAGATCTTGTATTTATAACGGCAGGTATGGGTGGAGGTACAGGATCTGGTGCTGCACCAATTGTTGCTCAGATCTCCAAAGAGGCAGGTTATTTGACTGTTGGTGTAGTTACCTATCCATTCAGCTTTGAGGGGAGAAGAAGATCTTTGCAGGCAGGTGCATTGGAGGCGATTGAGAAGTTGCAGAAAAATGTTGATACTCTTATAGTGATTCCTAATGATCGTCTGCTTGACATTGCTGATGAGCAGACTCCCCTTCAGGATGCTTTCCTTCTTGCTGATGATGTTCTACGACAAGGCGTTCAAGGAATTTCAGACATCATTACAATACCAGGACTGGTCAATGTGGACTTTGCAGACGTAAAAGCAGTCATGAAAGACTCTGGAACTGCGATGCTTGGAGTTGGAGTTTCATCTAGCAAGAATCGTGCAGAAGAGGCTGCTGAACAAGCAACTTTGGCTCCGCTGCTTGGTTCATCTATTCAATCAGCTACTGGAGTAGTATATAACATCACTGGAGGAAAGGACATAACCCTGCAAGAAGTGAACCGAGTTTCTCAGGTTGTGACCAGTTTAGCGGATCCTTCTGCAAACATAATATTTGGGGCAGTTGTGGATGATCGATATAATGGCGAGATTCATGTAACGATAATTGCGACGGGGTTTTCAGAGTCATTTCAGAAGAATCTCTTAACAGACCCAAGGGCTGCAAAGCTGGTGGACAGAGTAGTTGGTGCAAAAGAAAGCATGCCCGTGAACTCTACTTCAACTGTCTCAACCAGATCCACCACGAGACGGCTCTTCTTTTAA 1257 45.43 MAALQLPNPKGVISTSSISSHFHRKSSSAPPIILRECSTSHCRRRGLSRRHNINVMSCSFSSMDSAKIKVVGVGGGGNNAVNRMIRSGLQGVDFYAINTDAQALVQSAAENPLQIGVLLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPIVAQISKEAGYLTVGVVTYPFSFEGRRRSLQAGALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLLGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSESFQKNLLTDPRAAKLVDRVVGAKESMPVNSTSTVSTRSTTRRLFF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27540022 27543381 - BLOR18812 Blo07g00880 63404

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00880 418 CDD FtsZ_type1 83 370 IPR000158 GO:0003924|GO:0005525
Blo07g00880 418 MobiDBLite consensus disorder prediction 1 25 - -
Blo07g00880 418 PRINTS Cell division protein FtsZ signature 268 289 IPR003008 GO:0005525
Blo07g00880 418 PRINTS Cell division protein FtsZ signature 180 201 IPR003008 GO:0005525
Blo07g00880 418 PRINTS Cell division protein FtsZ signature 245 267 IPR003008 GO:0005525
Blo07g00880 418 PRINTS Cell division protein FtsZ signature 152 172 IPR003008 GO:0005525
Blo07g00880 418 Pfam FtsZ family, C-terminal domain 278 371 IPR024757 -
Blo07g00880 418 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 418 IPR045061 GO:0003924|GO:0005525
Blo07g00880 418 TIGRFAM ftsZ: cell division protein FtsZ 62 378 IPR000158 GO:0003924|GO:0005525
Blo07g00880 418 Gene3D Tubulin/FtsZ, GTPase domain 59 276 IPR036525 -
Blo07g00880 418 SUPERFAMILY Tubulin nucleotide-binding domain-like 66 264 IPR036525 -
Blo07g00880 418 Pfam Tubulin/FtsZ family, GTPase domain 67 229 IPR003008 GO:0005525
Blo07g00880 418 PANTHER CELL DIVISION PROTEIN FTSZ HOMOLOG 1, CHLOROPLASTIC 1 418 - -
Blo07g00880 418 Gene3D - 277 383 IPR037103 -
Blo07g00880 418 Hamap Cell division protein FtsZ [ftsZ]. 63 394 IPR000158 GO:0003924|GO:0005525
Blo07g00880 418 ProSitePatterns FtsZ protein signature 1. 98 132 IPR020805 GO:0005525
Blo07g00880 418 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 160 166 IPR017975 GO:0005525|GO:0005874|GO:0007017
Blo07g00880 418 SMART Tubulin_4 67 261 IPR003008 GO:0005525
Blo07g00880 418 MobiDBLite consensus disorder prediction 9 25 - -
Blo07g00880 418 ProSitePatterns FtsZ protein signature 2. 151 172 IPR020805 GO:0005525
Blo07g00880 418 SMART Tubulin_C_4 263 380 IPR018316 -
Blo07g00880 418 SUPERFAMILY Tubulin C-terminal domain-like 263 379 IPR008280 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00880 K03531 ftsZ; cell division protein FtsZ - zju:107434326 609.757
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo07g00880 Blo10g00853 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00880 Blo-Chr7:27540022 Blo09g00498 Blo-Chr9:16164048 8.07E-110 dispersed
Blo10g00853 Blo-Chr10:27015561 Blo07g00880 Blo-Chr7:27540022 7.54E-50 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g585 . . . . . . Bma10g00581 Bma13g01095 . Cmo06g00884 . . . . . . . . . . . . . . Cla10g00460 Cam10g0446 Cec10g0469 Cco10g0457 Clacu10g0467 Cmu10g1296 Cre10g0701 Cone6ag0040 Cone9ag0046 . . . Csa03g00458 . Cme06g02820 Blo07g00880 Blo10g00853 . Bda12g00939 . . . . . . . . . . . . . Bhi11g00549 . . . . Mch10g1390 . . . . . . . . Lsi05g00545 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006787 2 1 2 2 2 1 2 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00880 Blo_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0