Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00883 ATGGAGCTTTGTACCGGTTGTCGTAGCTCTCAACTCTCTCAATCTCTGATCCGTTTATCCCATTTCCCTCTCTCGACGAAATGTCTTCTCCACTTCAATCACAGAGCCTTCACTTCTCTCAAGCTTCCCTCATTTTCCACCCAATTTCACCTACTTCAGCCACTCCATTTTCGTTCAACTTCGCTTAATTTCGCTACTCTGGCTTCTTCTTCGGTTGATATTCCGGAGTTAGAGCAGCTTCCGGCCGACCTCGAAGTTACTGAAAGGGAGGAACCTAATTCCAGAATTAGATTGAGTGTGGGAGTTCCACCAGCTATTTGCCAAGATTGCTACAAAGAAGTTATGAATGAGTTCATGAAGCAAGCGAAGGTCCCTGGATTTCGCCTGGGGAAAAAAGTTCCAGAGGATATTTTGGTTAATTACATTGGGAAGAGAAATGTTGATAAGGCCATTGTTGAATCAATTCTGAAGAGAACCCTTCCGCATGCAATGTCTTCAGTGGAGGGAAGGGCATTGAGAGACTCAGTTCGTATAGCGACAAAATTTTCTGACATGGAGCTGACTTACTCTTCTCTCAATTCTCTCAGATATGACATCATTGTCGATGTGGCTCCCGAGGTCAAATGGATTCCGGAAAATGGATATAAAAAATTGAAAGTAATTGTTGAAATAGATAGTGACATCAATGCCCAGAAAGCTTCTGAACAAGAATTTAATCGACGCCTCAAGTCCATTGGTATTCTCAGAATCGTGAGTGACAGAGAGCTGCAGATCGGTGACGTTGCGGTCATTGATATATCTGCAATAACTATTGGTCAAGATAAAACAAAGGGTCAAACAATTCCATCAGCAGAGAGCAAAGGTTTCCAATTTGATACTGAAGATGGTGATAAAATCCTTCCTGGTTTTCTTAACTCGATAATTGGAATTCGGCGAGGTGAAACAAAGTCATTTCCTCTAGTATTTCCGGAATCTTGGAGACAAGAAAATCTTCGAGGTGTTCATGCTCAGTTCACAGTTGAATGCAAAGAACTATTTTACAGAGATTTACCAGAGTTGGATGACCCTCTAGCTGAGAAGCTTCTTCCTGGTTGCACCACCTTAGAACAGGTGAAGGCAGAATTGTTGAAAAAATGTGAAGAAGTGGAGCAAACAGCAAGAGAACAAGCAACAGATAATGCTATCCTTGATCAGCTATGCAAGATGGTGGAAGTTGATATTCCTCAGTCCTTGTTTGAGGAGCAAGGTAGGCAGCTTTATGGAGCTAAGCTTTTGCAAATTCAGGCAAATATGAAACTCAATGACAATCAGTTGGCTACTCTATCAAGTCCAAAGGCTGTCAACGAGTACCTCGAAGGCCAAAAAGATAACATAGTCAATGTGATAAAACAGAATCTAGCTGTTGGAGATATATTTAAACGTGAAAATTTACAGTTTTCGACCGAAGAGCTTGTCAAAGAGGTCGAGAATTCAATCACTGAATTCAAACGTTATAAGCAAGAATACGACGAAGATCGTGTGAAAGAACAGGAAATCTGGGACGAGGTTGGTGAAAGTGATGAAGAAAGGGATAAAATGCTGCTACAGCTGGAGCAGGAGTGCTTGGATGTATACAAGAGGAAAGTCGACCAAGCTGCCAAGTCAAGGTCACAACTTCTGCAATCACTCTCAGATGCCAAAGTAGAACTTTCAAATCTTCTGACAGCTCTAGGAGAAAAAAGCTTTGATGAAATTCCGGAGAAAACTTCTCAAACAATCAAGGAACAACTTGCTGGTATAACACCAAGACTTACTCAACTATGGCAACAGAAAGAAGTTAGAATGAAGCAGTTCTCTGACGTACAATTGCACATTCAGAAGATCAGTGGAGTAATTGCAGGGAAAGTAAAAATTATTGAGACTCCAATGGTTGATGAGACTGACTTGTCCTTGAAAAAACTGAACCAATACAAAACTCAAGTTCAGGAACTCCAAAAAGAAAAAAATGACAGATTGCTAAAAGTCCAGGCATTTATGAGCACTGTGCATGATCTTTGTGCTGTTCTTGGGATGGATTTCTTTAGTGCTTTTACTGAGGCACATCCAAGCTTAAATGACCCTACTGGTGTGCAATCAAAAAGCATAAGCAATGATACTTTATCTAGTCTAGAAAAGACAGTCTTATCACTAAACGAAGATAAGAAGCAGAGGCTGCATAAGCTTCAAGAGTTGGCAACTCAGCTAATTGATCTTTGGAATTTGATGGACACTCCCACTGATGAAAGAAGATTGTATGACCACGTAACTTGTAACATGTCTGCTTCAGTGGATGAGGTTACTGCCCCTGGAGCTCTTTCCCTGGATTTGATCGAGCAGGCTGACACAGAAGTTCAAAGACTTGATCAGCTCAAAGCCAGTAGGATGAAAGAAATTGCTTTCAAGAAGCAAGATGAACTTGAAGAGATATTTGCTCATACTCACATAGCAATAGACCCAGAAGCTGCTCGTGAAAACATTATGATACTGATTGACAGTGGTAATGTTGAGCCGGTTGAGTTAATTGCTGACATGGATAATCGAATAGCTAAGGCCAAAGACGAAGCTCTTAGCAGAAAAGAGATATTGGACAAGGTTGAGAAATGGATGTCAACTTGTGAAGAAGAGAACTGGTTAGACGACTACAATCGGGATGATAACAGGTACAATGCAAGTAGGGGGGCACACTTAAACCTTAAGCGAGCAGAAAAAGCAAGAGTTCTGGTCAATAAAATTCCAGCCATGGTTGACGCACTGGTTGCCAAAACTCGGTCCTGGGAAGAAGATCATGGCGTATCATTTAATTATGATGGTGTACCTCTTCTTGCCACCCTAGATGATTACGTTATGCTCAGACATGAAAAAGAGGAAGTAAAGCGAAGGATGAAAGACAGTAGAAAATTTAGTGAGCAGCAAAACACAGATCAAGAAGCCATTGTTGGTTCAAAGCCTAGCCCAGCTCGCCCAATCATCACGAAGAAGGTGATAGGCCGACGGTTATCTCTTAATACTCCTCAAAATGGAGCCAAATCAGCGTCAAAAGAAGGAAGAAGGGATAGTACAAGGCTGGCAGCACATGCAAAGGAAGATTCTGTTTCTTACACTTCCGGCAGCCAACCTGTTTCGGCTTCACCATGA 3153 41.58 MELCTGCRSSQLSQSLIRLSHFPLSTKCLLHFNHRAFTSLKLPSFSTQFHLLQPLHFRSTSLNFATLASSSVDIPELEQLPADLEVTEREEPNSRIRLSVGVPPAICQDCYKEVMNEFMKQAKVPGFRLGKKVPEDILVNYIGKRNVDKAIVESILKRTLPHAMSSVEGRALRDSVRIATKFSDMELTYSSLNSLRYDIIVDVAPEVKWIPENGYKKLKVIVEIDSDINAQKASEQEFNRRLKSIGILRIVSDRELQIGDVAVIDISAITIGQDKTKGQTIPSAESKGFQFDTEDGDKILPGFLNSIIGIRRGETKSFPLVFPESWRQENLRGVHAQFTVECKELFYRDLPELDDPLAEKLLPGCTTLEQVKAELLKKCEEVEQTAREQATDNAILDQLCKMVEVDIPQSLFEEQGRQLYGAKLLQIQANMKLNDNQLATLSSPKAVNEYLEGQKDNIVNVIKQNLAVGDIFKRENLQFSTEELVKEVENSITEFKRYKQEYDEDRVKEQEIWDEVGESDEERDKMLLQLEQECLDVYKRKVDQAAKSRSQLLQSLSDAKVELSNLLTALGEKSFDEIPEKTSQTIKEQLAGITPRLTQLWQQKEVRMKQFSDVQLHIQKISGVIAGKVKIIETPMVDETDLSLKKLNQYKTQVQELQKEKNDRLLKVQAFMSTVHDLCAVLGMDFFSAFTEAHPSLNDPTGVQSKSISNDTLSSLEKTVLSLNEDKKQRLHKLQELATQLIDLWNLMDTPTDERRLYDHVTCNMSASVDEVTAPGALSLDLIEQADTEVQRLDQLKASRMKEIAFKKQDELEEIFAHTHIAIDPEAARENIMILIDSGNVEPVELIADMDNRIAKAKDEALSRKEILDKVEKWMSTCEEENWLDDYNRDDNRYNASRGAHLNLKRAEKARVLVNKIPAMVDALVAKTRSWEEDHGVSFNYDGVPLLATLDDYVMLRHEKEEVKRRMKDSRKFSEQQNTDQEAIVGSKPSPARPIITKKVIGRRLSLNTPQNGAKSASKEGRRDSTRLAAHAKEDSVSYTSGSQPVSASP 1050
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27557607 27569656 - BLOR18815 Blo07g00883 63407

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00883 1050 Gene3D - 218 484 IPR037041 GO:0006457|GO:0015031
Blo07g00883 1050 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 353 514 IPR027304 -
Blo07g00883 1050 Pfam Bacterial trigger factor protein (TF) 86 223 IPR008881 GO:0006457|GO:0015031
Blo07g00883 1050 Coils Coil 365 392 - -
Blo07g00883 1050 Pfam Bacterial trigger factor protein (TF) C-terminus 367 509 IPR008880 GO:0006457|GO:0015031
Blo07g00883 1050 Coils Coil 640 667 - -
Blo07g00883 1050 Coils Coil 724 744 - -
Blo07g00883 1050 Coils Coil 481 501 - -
Blo07g00883 1050 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 510 1050 IPR007145 GO:0000226|GO:0008017
Blo07g00883 1050 MobiDBLite consensus disorder prediction 964 1050 - -
Blo07g00883 1050 Hamap Trigger factor [tig]. 84 541 IPR005215 GO:0015031
Blo07g00883 1050 MobiDBLite consensus disorder prediction 1036 1050 - -
Blo07g00883 1050 SUPERFAMILY Trigger factor ribosome-binding domain 84 220 IPR036611 GO:0006457|GO:0015031
Blo07g00883 1050 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 510 1050 - -
Blo07g00883 1050 Gene3D - 853 987 - -
Blo07g00883 1050 MobiDBLite consensus disorder prediction 1017 1031 - -
Blo07g00883 1050 Pfam Microtubule associated protein (MAP65/ASE1 family) 510 992 - -
Blo07g00883 1050 Gene3D - 84 217 IPR036611 GO:0006457|GO:0015031
Blo07g00883 1050 SUPERFAMILY FKBP-like 250 354 - -
Blo07g00883 1050 Gene3D - 247 351 IPR046357 GO:0003755
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00883 K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein - zju:107403625 818.15
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01459 Blo-Chr3:41206103 Blo07g00883 Blo-Chr7:27557607 0 dispersed
Blo07g00883 Blo-Chr7:27557607 Blo16g01197 Blo-Chr16:40478405 6.90E-130 dispersed
Blo10g00849 Blo-Chr10:26985119 Blo07g00883 Blo-Chr7:27557607 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g575 . . Bda07g00378 Bda09g00408 Bpe09g00151 Bpe08g01113 . Bma13g01085 . Cmo06g00891 . . . . . . . . . . . . . . Cla10g00472 Cam10g0460 Cec10g0481 Cco10g0469 Clacu10g0479 Cmu10g1308 Cre10g0713 . Cone9ag0051 Cone14ag1180 Cone15ag1195 . Csa03g00474 . Cme06g02836 Blo07g00883 . . . . . Bma07g01285 Bma14g00324 Sed08g2977 . . . . . . . . Bhi11g00574 Tan01g1748 Cmetu06g2464 . . . . . . . . . . . Lsi05g00562 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00883 Blo_Chr07 FPKM 42.786449 43.606461 81.479721 84.017838 49.258564 49.237541 47.334057 77.816582 75.59935 82.233101