Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00887 ATGAGGAAAGGAAGAGGATCGGCCGTTGCTCGGCCGGTGGCTTCTCCACTCGCCGTAGCCGGAGAATCGGCCGTGCCTCTTGGCACATCGGTGGCTGCGGGATCGGTTTCGAGGAATATCCTGGCGAAAGAGCCCAGATACAGAGGGGTGAGGAAAAGGCCGTGGGGTAGATTCGCCGCTGAGATCAGAGACCCCTGGAAAAAGACTAGAGTGTGGCTCGGGACTTTCGATTCGGCAGAGGACGCGGCCCGTGCCTACGATGCTGCCGCTCGGACGCTCCGTGGTCCAAAGGCGAAAACTAATTTTTCTCTCTCGAATCCTAATTTTCTTGATTTTCCTTATCATCACAACGCGATCGTTCCCAATAATGTTCCTGGCCTCGATCCGCTCATTGATCATCGGTTTTACGGTGGAAATGGCTTCCAAGAGCACCAGATGAATCCGCATAGACCGACCTCTAGCAGTTTGAGCTCCACCGTTGAGTCTTTCAGTGGGCCTAGACCTCGATCGGCGACCTTGACAGCTCCAACTACAGCTTCGGCCTCAGCCTTGCGGCGGCACCCTCGTACACCGCCTGTGTCGCCGGAAGACTGTATTAGTGAATGCGACTCGTCGTCATCTGTGATTGACGACGGGGATTTCACCTCATCGTCGATGTTCCGTAAACCGATTCAAATCGACCTCAATTTTCCTCCTTTCGAAGATGGCGACTTTCCCAGCGACGATCTCCAATGTACTGCATTATGCCTTTGA 753 54.18 MRKGRGSAVARPVASPLAVAGESAVPLGTSVAAGSVSRNILAKEPRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFSLSNPNFLDFPYHHNAIVPNNVPGLDPLIDHRFYGGNGFQEHQMNPHRPTSSSLSSTVESFSGPRPRSATLTAPTTASASALRRHPRTPPVSPEDCISECDSSSSVIDDGDFTSSSMFRKPIQIDLNFPPFEDGDFPSDDLQCTALCL 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27634893 27635645 - BLOR18819 Blo07g00887 63411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00887 250 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 MobiDBLite consensus disorder prediction 145 184 - -
Blo07g00887 250 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Blo07g00887 250 SUPERFAMILY DNA-binding domain 46 105 IPR016177 GO:0003677
Blo07g00887 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 229 - -
Blo07g00887 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 21 229 - -
Blo07g00887 250 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Blo07g00887 250 MobiDBLite consensus disorder prediction 138 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01217 Blo-Chr4:23070283 Blo07g00887 Blo-Chr7:27634893 6.89E-39 dispersed
Blo07g00887 Blo-Chr7:27634893 Blo01g01701 Blo-Chr1:56775285 8.08E-30 dispersed
Blo07g00887 Blo-Chr7:27634893 Blo03g00671 Blo-Chr3:28315123 9.39E-30 transposed
Blo07g00887 Blo-Chr7:27634893 Blo03g01556 Blo-Chr3:43268014 7.25E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12641 PF00847 AP2 9.30E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00887 K09286 - zju:107432807 251.906